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author = {S.~J. Marrink and D.~P. Teileman}, |
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title = {Molecular Dynamics Simulation of Spontaneous Membrane Fusion during a Cubic-Hexagonal Phase Transition}, |
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title = {Molecular Simulation Study on the influence of Dimethylsulfoxide on the structure of Phospholipid Bilayers}, |
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title = {Setting up and optimization of membrane protein simulations}, |
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author = {M. Holz and S.~R. Heil and A. Sacco}, |
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title = {Temperature-dependent self-diffusion coefficients of |
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water and six selected molecular liquids for calibration |
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in accurate $^1${\sc h} {\sc nmr pfg} measurements}, |
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journal = {Phys. Chem. Chem. Phys.}, |
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title = {An introduction to the molecular dynamics method and to orientational dynamics in liquid crystals}, |
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author = {C. Zannoni}, |
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title = {An introduction to the molecular dynamics method and to orientational dynamics in liquid crystals}, |
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title = {Hoover {\sc npt} dynamics for systems varying in shape and size}, |
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journal = {Molecular Physics}, |
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year = 1993, |
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@Article{fennell04, |
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author = {C.~J. Fennell and J.~D. Gezelter}, |
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title = {On the structural and transport properties of the soft sticky dipole(SSD) and related single point water models}, |
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journal = {J. Chem. Phys}, |
| 2054 |
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year = {in press 2004} |
| 2051 |
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author = {C.~J. Fennell and J.~D. Gezelter}, |
| 2052 |
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title = {On the structural and transport properties of the soft sticky dipole(SSD) and related single point water models}, |
| 2053 |
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journal = {J. Chem. Phys}, |
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year = {in press 2004} |
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@Article{klein01, |
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author = {J.~C. Shelley andf M.~Y. Shelley and R.~C. Reeder and S. Bandyopadhyay and M.~L. Klein}, |
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< |
title = {A coarse Grain Model for Phospholipid Simulations}, |
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journal = {J. Phys. Chem. B}, |
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year = 2001, |
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volume = 105, |
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pages = {4464-4470} |
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author = {J.~C. Shelley andf M.~Y. Shelley and R.~C. Reeder and S. Bandyopadhyay and M.~L. Klein}, |
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title = {A coarse Grain Model for Phospholipid Simulations}, |
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journal = {J. Phys. Chem. B}, |
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year = 2001, |
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volume = 105, |
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@Article{marrink03:vesicles, |
| 2068 |
< |
author = {S.~J. Marrink and A.~E. Mark}, |
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< |
title = {Molecular Dynaimcs Simulation of the Formation, Structure, and Dynamics of Small Phospholipid Vesicles}, |
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journal = {J. Am. Chem. Soc.}, |
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year = 2003, |
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volume = 125, |
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pages = {15233-15242} |
| 2068 |
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author = {S.~J. Marrink and A.~E. Mark}, |
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title = {Molecular Dynaimcs Simulation of the Formation, Structure, and Dynamics of Small Phospholipid Vesicles}, |
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chapter = 7, |
| 2080 |
+ |
publisher = {Perason Education}, |
| 2081 |
+ |
year = 1994, |
| 2082 |
+ |
address = {London}, |
| 2083 |
+ |
pages = {199-206} |
| 2084 |
+ |
} |
| 2085 |
+ |
|
| 2086 |
+ |
@Book{alexander, |
| 2087 |
+ |
author = {C. Alexander}, |
| 2088 |
+ |
title = {A Pattern Language: Towns, Buildings, Construction}, |
| 2089 |
+ |
publisher = {Oxford University Press}, |
| 2090 |
+ |
year = 1987, |
| 2091 |
+ |
address = {New York} |
| 2092 |
+ |
} |
| 2093 |
+ |
|
| 2094 |
+ |
@Article{wilson, |
| 2095 |
+ |
author = {G.~V. Wilson }, |
| 2096 |
+ |
title = {Where's the Real Bottleneck in Scientific Computing?}, |
| 2097 |
+ |
journal = {American Scientist}, |
| 2098 |
+ |
year = 2006, |
| 2099 |
+ |
volume = 94 |
| 2100 |
+ |
} |
| 2101 |
+ |
|
| 2102 |
+ |
@article{Meineke05, |
| 2103 |
+ |
Author = {M.~A. Meineke and C.~F. {Vardeman II} and T. Lin and C.~J. Fennell and J.~D. Gezelter}, |
| 2104 |
+ |
Date-Modified = {2006-03-05 12:37:31 -0500}, |
| 2105 |
+ |
Journal = {J. Comp. Chem.}, |
| 2106 |
+ |
Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/MyPapers/Meineke_OOPSE_05.pdf}, |
| 2107 |
+ |
Pages = {252-271}, |
| 2108 |
+ |
Title = {OOPSE: An Open Source Object-Oriented Parallel Simulation Engine for Molecular Dynamics}, |
| 2109 |
+ |
Volume = 26, |
| 2110 |
+ |
Year = 2005 |
| 2111 |
+ |
} |
