| 1 | mmeineke | 10 | #include <cmath> | 
| 2 |  |  |  | 
| 3 |  |  | #include "SRI.hpp" | 
| 4 |  |  |  | 
| 5 |  |  | QuadraticBend::QuadraticBend( Atom &a, Atom &b, Atom &c ){ | 
| 6 |  |  |  | 
| 7 |  |  | set_atoms( a, b, c ); | 
| 8 |  |  | c1 = 0.0; | 
| 9 |  |  | c2 = 0.0; | 
| 10 |  |  | c3 = 0.0; | 
| 11 |  |  | theta0 = 0.0; | 
| 12 |  |  | } | 
| 13 |  |  |  | 
| 14 |  |  | void QuadraticBend::setConstants( double the_c1, double the_c2, double the_c3, | 
| 15 |  |  | double the_Th0 ){ | 
| 16 |  |  | c1 = the_c1; | 
| 17 |  |  | c2 = the_c2; | 
| 18 |  |  | c3 = the_c3; | 
| 19 |  |  | theta0 = the_Th0; | 
| 20 |  |  | } | 
| 21 |  |  |  | 
| 22 |  |  |  | 
| 23 |  |  | double QuadraticBend::bend_force( double theta ){ | 
| 24 |  |  |  | 
| 25 |  |  | double dt, dt2; | 
| 26 |  |  | double force; | 
| 27 |  |  |  | 
| 28 |  |  | dt = ( theta - theta0 ) * M_PI / 180.0; | 
| 29 |  |  | dt2 = dt * dt; | 
| 30 |  |  |  | 
| 31 |  |  | c_potential_E = ( c1 * dt2 ) + ( c2 * dt ) + c3; | 
| 32 |  |  | force = -( ( 2.0 * c1 * dt ) + c2 ); | 
| 33 |  |  | return force; | 
| 34 |  |  | } |