| 43 |
|
double* epslon, |
| 44 |
|
double* sigma, |
| 45 |
|
int* status ), |
| 46 |
< |
void (*p2)( void ), |
| 46 |
> |
void (*p2)( int *nLocal, |
| 47 |
> |
int *identArray, |
| 48 |
> |
int *isError ), |
| 49 |
|
void (*p3)( double* positionArray, |
| 50 |
|
double* forceArray, |
| 51 |
|
double* potentialEnergy, |
| 56 |
|
|
| 57 |
|
void LJfunctionWrapper( void (*p1)( int* ident, double* mass, double* epslon, |
| 58 |
|
double* sigma, int* status ), |
| 59 |
< |
void (*p2)( void ), |
| 59 |
> |
void (*p2)( int *nLocal, int *identArray, int *isError ), |
| 60 |
|
void (*p3)( double* positionArray,double* forceArray, |
| 61 |
|
double* potentialEnergy, |
| 62 |
|
short int* doPotentialCalc ) ); |
| 64 |
|
void (*newLJtype)( int* ident, double* mass, double* epslon, double* sigma, |
| 65 |
|
int* status ); |
| 66 |
|
|
| 67 |
< |
void (*initLJfortran)( void ); |
| 67 |
> |
void (*initLJfortran) ( int *nLocal, int *identArray, int *isError ) |
| 68 |
|
|
| 69 |
|
LJ_FF* currentLJwrap; |
| 70 |
|
|
| 384 |
|
currentAtomType = headAtomType; |
| 385 |
|
while( currentAtomType != NULL ){ |
| 386 |
|
|
| 387 |
< |
if( currentAtomType->name[0] != NULL ){ |
| 387 |
> |
if( currentAtomType->name[0] != '\0' ){ |
| 388 |
|
isError = 0; |
| 389 |
|
newLJtype( &(currentAtomType->ident), |
| 390 |
|
&(currentAtomType->mass), |
| 391 |
|
&(currentAtomType->epslon), |
| 392 |
|
&(currentAtomType->sigma), |
| 393 |
< |
isError ); |
| 393 |
> |
&isError ); |
| 394 |
|
if( isError ){ |
| 395 |
|
sprintf( painCave.errMsg, |
| 396 |
|
"Error initializing the \"%s\" atom type in fortran\n", |
| 442 |
|
MPIcheckPoint(); |
| 443 |
|
#endif // is_mpi |
| 444 |
|
|
| 445 |
+ |
initFortran(); |
| 446 |
+ |
|
| 447 |
|
} |
| 448 |
|
|
| 449 |
|
void LJ_FF::initializeBonds( bond_pair* the_bonds ){ |
| 608 |
|
doLJfortran( pos, frc, potE, calcPot ); |
| 609 |
|
} |
| 610 |
|
|
| 611 |
+ |
void LJ_FF::initFortran( void ){ |
| 612 |
+ |
|
| 613 |
+ |
int nLocal = entry_plug->n_atoms; |
| 614 |
+ |
int *ident; |
| 615 |
+ |
int isError; |
| 616 |
+ |
int i; |
| 617 |
+ |
|
| 618 |
+ |
ident = new int[nLocal]; |
| 619 |
+ |
|
| 620 |
+ |
for(i=0; i<nLocal; i++){ |
| 621 |
+ |
ident[i] = entryplug->atoms[i]->getIdent(); |
| 622 |
+ |
} |
| 623 |
+ |
|
| 624 |
+ |
isError = 0; |
| 625 |
+ |
initLJfortran( &nLocal, ident, &isError ); |
| 626 |
+ |
|
| 627 |
+ |
if(isError){ |
| 628 |
+ |
sprintf( painCave.errMsg, |
| 629 |
+ |
"LJ_FF error: There was an error initializing the component list in fortran.\n" ); |
| 630 |
+ |
painCave.isFatal = 1; |
| 631 |
+ |
simError(); |
| 632 |
+ |
} |
| 633 |
+ |
|
| 634 |
+ |
|
| 635 |
+ |
#ifdef IS_MPI |
| 636 |
+ |
sprintf( checkPointMsg, "LJ_FF successfully initialized the fortran component list.\n" ); |
| 637 |
+ |
MPIcheckPoint(); |
| 638 |
+ |
#endif // is_mpi |
| 639 |
+ |
|
| 640 |
+ |
delete[] ident; |
| 641 |
+ |
|
| 642 |
+ |
} |
| 643 |
+ |
|