41 |
|
int d; |
42 |
|
}; |
43 |
|
|
44 |
– |
// typedef struct{ |
45 |
– |
// int a, b; |
46 |
– |
// } bond_pair; |
44 |
|
|
48 |
– |
// typedef struct{ |
49 |
– |
// int a, b, c; |
50 |
– |
// } bend_set; |
45 |
|
|
52 |
– |
// typedef struct{ |
53 |
– |
// int a, b, c, d; |
54 |
– |
// } torsion_set; |
55 |
– |
|
56 |
– |
|
46 |
|
class ForceFields{ |
47 |
|
|
48 |
|
public: |
54 |
|
virtual void initializeBonds( bond_pair* the_bonds ) = 0; |
55 |
|
virtual void initializeBends( bend_set* the_bends ) = 0; |
56 |
|
virtual void initializeTorsions( torsion_set* the_torsions ) = 0; |
57 |
+ |
virtual void doForces( int calcPot ) = 0; |
58 |
|
|
59 |
|
protected: |
60 |
|
|
61 |
|
FILE *frcFile; |
62 |
|
SimInfo* entry_plug; |
63 |
+ |
|
64 |
+ |
int lineNum; |
65 |
+ |
char readLine[500]; |
66 |
+ |
char* eof_test; |
67 |
|
|
68 |
|
}; |
69 |
|
|
77 |
|
void initializeBonds( bond_pair* the_bonds ); |
78 |
|
void initializeBends( bend_set* the_bends ); |
79 |
|
void initializeTorsions( torsion_set* the_torsions ); |
80 |
+ |
void doForces( int ) {} |
81 |
|
}; |
82 |
|
|
83 |
|
|
91 |
|
void initializeBonds( bond_pair* the_bonds ); |
92 |
|
void initializeBends( bend_set* the_bends ); |
93 |
|
void initializeTorsions( torsion_set* the_torsions ); |
94 |
+ |
void doForces( int ) {} |
95 |
|
}; |
96 |
|
|
97 |
|
class TraPPE_ExFF : public ForceFields{ |
104 |
|
void initializeBonds( bond_pair* the_bonds ); |
105 |
|
void initializeBends( bend_set* the_bends ); |
106 |
|
void initializeTorsions( torsion_set* the_torsions ); |
107 |
+ |
void doForces( int ) {} |
108 |
|
}; |
109 |
|
|
110 |
|
class LJ_FF : public ForceFields{ |
117 |
|
void initializeBonds( bond_pair* the_bonds ); |
118 |
|
void initializeBends( bend_set* the_bends ); |
119 |
|
void initializeTorsions( torsion_set* the_torsions ); |
120 |
+ |
void setLJfortran( void (*fortranSub)( double* positionArray, |
121 |
+ |
double* forceArray, |
122 |
+ |
double* potentialEnergy, |
123 |
+ |
short int* doPotentialCalc ) ){ |
124 |
+ |
doLJfortran = fortranSub; |
125 |
+ |
} |
126 |
+ |
void doForces( int ); |
127 |
+ |
|
128 |
+ |
private: |
129 |
+ |
|
130 |
+ |
void fastForward( char* stopText, char* searchOwner ); |
131 |
+ |
|
132 |
+ |
// set our sister fortran module's function to be our own. |
133 |
+ |
void wrapMe( void ); |
134 |
+ |
void (*doLJfortran)( double* positionArray, |
135 |
+ |
double* forceArray, |
136 |
+ |
double* potentialEnergy, |
137 |
+ |
short int* doPotentialCalc ); |
138 |
+ |
void initFortran( void ); |
139 |
|
}; |
140 |
|
|
141 |
|
#endif |