65 |
|
virtual void initializeBonds( bond_pair* the_bonds ) = 0; |
66 |
|
virtual void initializeBends( bend_set* the_bends ) = 0; |
67 |
|
virtual void initializeTorsions( torsion_set* the_torsions ) = 0; |
68 |
+ |
virtual void doForces( void ) = 0; |
69 |
|
|
70 |
|
protected: |
70 |
– |
|
71 |
– |
void ffError( char* errMsg ){ |
72 |
– |
|
73 |
– |
#ifdef IS_MPI |
74 |
– |
ffInterfaceExit( errMsg ); |
75 |
– |
#else |
76 |
– |
fprintf( stderr, "%s\n", errMsg ); |
77 |
– |
exit(0); |
78 |
– |
#endif |
79 |
– |
} |
80 |
– |
|
71 |
|
|
72 |
|
FILE *frcFile; |
73 |
|
SimInfo* entry_plug; |
74 |
+ |
|
75 |
+ |
int lineNum; |
76 |
+ |
char readLine[500]; |
77 |
+ |
char* eof_test; |
78 |
|
|
79 |
|
}; |
80 |
|
|
88 |
|
void initializeBonds( bond_pair* the_bonds ); |
89 |
|
void initializeBends( bend_set* the_bends ); |
90 |
|
void initializeTorsions( torsion_set* the_torsions ); |
91 |
+ |
void doForces( void ) {} |
92 |
|
}; |
93 |
|
|
94 |
|
|
102 |
|
void initializeBonds( bond_pair* the_bonds ); |
103 |
|
void initializeBends( bend_set* the_bends ); |
104 |
|
void initializeTorsions( torsion_set* the_torsions ); |
105 |
+ |
void doForces( void ) {} |
106 |
|
}; |
107 |
|
|
108 |
|
class TraPPE_ExFF : public ForceFields{ |
115 |
|
void initializeBonds( bond_pair* the_bonds ); |
116 |
|
void initializeBends( bend_set* the_bends ); |
117 |
|
void initializeTorsions( torsion_set* the_torsions ); |
118 |
+ |
void doForces( void ) {} |
119 |
|
}; |
120 |
|
|
121 |
+ |
class LJ_FF : public ForceFields{ |
122 |
+ |
|
123 |
+ |
public: |
124 |
+ |
LJ_FF(); |
125 |
+ |
virtual ~LJ_FF(); |
126 |
+ |
|
127 |
+ |
void initializeAtoms( void ); |
128 |
+ |
void initializeBonds( bond_pair* the_bonds ); |
129 |
+ |
void initializeBends( bend_set* the_bends ); |
130 |
+ |
void initializeTorsions( torsion_set* the_torsions ); |
131 |
+ |
void setLJfortran( void (*fortranSub)( double* positionArray, |
132 |
+ |
double* forceArray, |
133 |
+ |
double* potentialEnergy, |
134 |
+ |
short int* doPotentialCalc ) ){ |
135 |
+ |
doLJfortran = fortranSub; |
136 |
+ |
} |
137 |
+ |
void doForces( void ); |
138 |
+ |
|
139 |
+ |
private: |
140 |
+ |
|
141 |
+ |
void fastForward( char* stopText, char* searchOwner ); |
142 |
+ |
|
143 |
+ |
// set our sister fortran module's function to be our own. |
144 |
+ |
void wrapMe( void ); |
145 |
+ |
void (*doLJfortran)( double* positionArray, |
146 |
+ |
double* forceArray, |
147 |
+ |
double* potentialEnergy, |
148 |
+ |
short int* doPotentialCalc ); |
149 |
+ |
void initFortran( void ); |
150 |
+ |
}; |
151 |
+ |
|
152 |
|
#endif |