| 49 |
|
|
| 50 |
|
} |
| 51 |
|
|
| 52 |
< |
void MoleculeStamp::assignString( char* lhs, char* rhs ){ |
| 52 |
> |
char* MoleculeStamp::assignString( char* lhs, char* rhs ){ |
| 53 |
|
|
| 54 |
|
if( !strcmp( lhs, "name" ) ){ |
| 55 |
|
strcpy( name, rhs ); |
| 60 |
|
else unhandled->add( lhs, rhs ); |
| 61 |
|
have_extras = 1; |
| 62 |
|
} |
| 63 |
+ |
return NULL; |
| 64 |
|
} |
| 65 |
|
|
| 66 |
< |
void MoleculeStamp::assignDouble( char* lhs, double rhs ){ |
| 66 |
> |
char* MoleculeStamp::assignDouble( char* lhs, double rhs ){ |
| 67 |
|
int i; |
| 68 |
|
|
| 69 |
|
if( !strcmp( lhs, "nAtoms" ) ){ |
| 70 |
|
n_atoms = (int)rhs; |
| 71 |
|
|
| 72 |
|
if( have_atoms ){ |
| 73 |
< |
std::cerr << "MoleculeStamp error, n_atoms already declared for" |
| 74 |
< |
<< " molecule: " << name << "\n"; |
| 75 |
< |
exit(1); |
| 73 |
> |
sprintf( errMsg, |
| 74 |
> |
"MoleculeStamp error, n_atoms already declared" |
| 75 |
> |
"for molecule: %s\n", |
| 76 |
> |
name); |
| 77 |
> |
return strdup( errMsg ); |
| 78 |
|
} |
| 79 |
|
have_atoms = 1; |
| 80 |
|
atoms = new AtomStamp*[n_atoms]; |
| 85 |
|
n_bonds = (int)rhs; |
| 86 |
|
|
| 87 |
|
if( have_bonds ){ |
| 88 |
< |
std::cerr << "MoleculeStamp error, n_bonds already declared for" |
| 89 |
< |
<< " molecule: " << name << "\n"; |
| 90 |
< |
exit(1); |
| 88 |
> |
sprintf( errMsg, |
| 89 |
> |
"MoleculeStamp error, n_bonds already declared for" |
| 90 |
> |
" molecule: %s\n", |
| 91 |
> |
name); |
| 92 |
> |
return strdup( errMsg ); |
| 93 |
|
} |
| 94 |
|
have_bonds = 1; |
| 95 |
|
bonds = new BondStamp*[n_bonds]; |
| 100 |
|
n_bends = (int)rhs; |
| 101 |
|
|
| 102 |
|
if( have_bends ){ |
| 103 |
< |
std::cerr << "MoleculeStamp error, n_bends already declared for" |
| 104 |
< |
<< " molecule: " << name << "\n"; |
| 105 |
< |
exit(1); |
| 103 |
> |
sprintf( errMsg, |
| 104 |
> |
"MoleculeStamp error, n_bends already declared for" |
| 105 |
> |
" molecule: %s\n", |
| 106 |
> |
name); |
| 107 |
> |
return strdup( errMsg ); |
| 108 |
|
} |
| 109 |
|
have_bends = 1; |
| 110 |
|
bends = new BendStamp*[n_bends]; |
| 115 |
|
n_torsions = (int)rhs; |
| 116 |
|
|
| 117 |
|
if( have_torsions ){ |
| 118 |
< |
std::cerr << "MoleculeStamp error, n_torsions already declared for" |
| 119 |
< |
<< " molecule: " << name << "\n"; |
| 120 |
< |
exit(1); |
| 118 |
> |
sprintf( errMsg, |
| 119 |
> |
"MoleculeStamp error, n_torsions already declared for" |
| 120 |
> |
" molecule: %s\n", |
| 121 |
> |
name ); |
| 122 |
> |
return strdup( errMsg ); |
| 123 |
|
} |
| 124 |
|
have_torsions = 1; |
| 125 |
|
torsions = new TorsionStamp*[n_torsions]; |
| 130 |
|
else unhandled->add( lhs, rhs ); |
| 131 |
|
have_extras = 1; |
| 132 |
|
} |
| 133 |
+ |
return NULL; |
| 134 |
|
} |
| 135 |
|
|
| 136 |
< |
void MoleculeStamp::assignInt( char* lhs, int rhs ){ |
| 136 |
> |
char* MoleculeStamp::assignInt( char* lhs, int rhs ){ |
| 137 |
|
int i; |
| 138 |
|
|
| 139 |
|
if( !strcmp( lhs, "nAtoms" ) ){ |
| 140 |
|
n_atoms = rhs; |
| 141 |
|
|
| 142 |
|
if( have_atoms ){ |
| 143 |
< |
std::cerr << "MoleculeStamp error, n_atoms already declared for" |
| 144 |
< |
<< " molecule: " << name << "\n"; |
| 145 |
< |
exit(1); |
| 143 |
> |
sprintf( errMsg, |
| 144 |
> |
"MoleculeStamp error, n_atoms already declared for" |
| 145 |
> |
" molecule: %s\n", |
| 146 |
> |
name); |
| 147 |
> |
return strdup( errMsg ); |
| 148 |
|
} |
| 149 |
|
have_atoms = 1; |
| 150 |
|
atoms = new AtomStamp*[n_atoms]; |
| 155 |
|
n_bonds = rhs; |
| 156 |
|
|
| 157 |
|
if( have_bonds ){ |
| 158 |
< |
std::cerr << "MoleculeStamp error, n_bonds already declared for" |
| 159 |
< |
<< " molecule: " << name << "\n"; |
| 160 |
< |
exit(1); |
| 158 |
> |
sprintf( errMsg, |
| 159 |
> |
"MoleculeStamp error, n_bonds already declared for" |
| 160 |
> |
" molecule: %s\n", |
| 161 |
> |
name); |
| 162 |
> |
return strdup( errMsg ); |
| 163 |
|
} |
| 164 |
|
have_bonds = 1; |
| 165 |
|
bonds = new BondStamp*[n_bonds]; |
| 170 |
|
n_bends = rhs; |
| 171 |
|
|
| 172 |
|
if( have_bends ){ |
| 173 |
< |
std::cerr << "MoleculeStamp error, n_bends already declared for" |
| 174 |
< |
<< " molecule: " << name << "\n"; |
| 175 |
< |
exit(1); |
| 173 |
> |
sprintf( errMsg, |
| 174 |
> |
"MoleculeStamp error, n_bends already declared for" |
| 175 |
> |
" molecule: %s\n", |
| 176 |
> |
name ); |
| 177 |
> |
return strdup( errMsg ); |
| 178 |
|
} |
| 179 |
|
have_bends = 1; |
| 180 |
|
bends = new BendStamp*[n_bends]; |
| 185 |
|
n_torsions = rhs; |
| 186 |
|
|
| 187 |
|
if( have_torsions ){ |
| 188 |
< |
std::cerr << "MoleculeStamp error, n_torsions already declared for" |
| 189 |
< |
<< " molecule: " << name << "\n"; |
| 190 |
< |
exit(1); |
| 188 |
> |
sprintf( errMsg, |
| 189 |
> |
"MoleculeStamp error, n_torsions already declared for" |
| 190 |
> |
" molecule: %s\n", |
| 191 |
> |
name); |
| 192 |
> |
return strdup( errMsg ); |
| 193 |
|
} |
| 194 |
|
have_torsions = 1; |
| 195 |
|
torsions = new TorsionStamp*[n_torsions]; |
| 200 |
|
else unhandled->add( lhs, rhs ); |
| 201 |
|
have_extras = 1; |
| 202 |
|
} |
| 203 |
+ |
return NULL; |
| 204 |
|
} |
| 205 |
|
|
| 206 |
|
char* MoleculeStamp::addAtom( AtomStamp* the_atom, int atomIndex ){ |
| 207 |
|
|
| 189 |
– |
char err[200]; |
| 190 |
– |
|
| 208 |
|
if( have_atoms && atomIndex < n_atoms ) atoms[atomIndex] = the_atom; |
| 209 |
|
else{ |
| 210 |
|
if( have_atoms ){ |
| 211 |
< |
sprintf( err, "MoleculeStamp error, %d out of nAtoms range", |
| 211 |
> |
sprintf( errMsg, "MoleculeStamp error, %d out of nAtoms range", |
| 212 |
|
atomIndex ); |
| 213 |
< |
return strdup( err ); |
| 213 |
> |
return strdup( errMsg ); |
| 214 |
|
} |
| 215 |
|
else return strdup("MoleculeStamp error, nAtoms not given before" |
| 216 |
|
"first atom declaration." ); |
| 221 |
|
|
| 222 |
|
char* MoleculeStamp::addBond( BondStamp* the_bond, int bondIndex ){ |
| 223 |
|
|
| 207 |
– |
char err[200]; |
| 224 |
|
|
| 225 |
|
if( have_bonds && bondIndex < n_bonds ) bonds[bondIndex] = the_bond; |
| 226 |
|
else{ |
| 227 |
|
if( have_bonds ){ |
| 228 |
< |
sprintf( err, "MoleculeStamp error, %d out of nBonds range", |
| 228 |
> |
sprintf( errMsg, "MoleculeStamp error, %d out of nBonds range", |
| 229 |
|
bondIndex ); |
| 230 |
< |
return strdup( err ); |
| 230 |
> |
return strdup( errMsg ); |
| 231 |
|
} |
| 232 |
|
else return strdup("MoleculeStamp error, nBonds not given before" |
| 233 |
|
"first bond declaration." ); |
| 238 |
|
|
| 239 |
|
char* MoleculeStamp::addBend( BendStamp* the_bend, int bendIndex ){ |
| 240 |
|
|
| 225 |
– |
char err[200]; |
| 241 |
|
|
| 242 |
|
if( have_bends && bendIndex < n_bends ) bends[bendIndex] = the_bend; |
| 243 |
|
else{ |
| 244 |
|
if( have_bends ){ |
| 245 |
< |
sprintf( err, "MoleculeStamp error, %d out of nBends range", |
| 245 |
> |
sprintf( errMsg, "MoleculeStamp error, %d out of nBends range", |
| 246 |
|
bendIndex ); |
| 247 |
< |
return strdup( err ); |
| 247 |
> |
return strdup( errMsg ); |
| 248 |
|
} |
| 249 |
|
else return strdup("MoleculeStamp error, nBends not given before" |
| 250 |
|
"first bend declaration." ); |
| 255 |
|
|
| 256 |
|
char* MoleculeStamp::addTorsion( TorsionStamp* the_torsion, int torsionIndex ){ |
| 257 |
|
|
| 243 |
– |
char err[200]; |
| 258 |
|
|
| 259 |
|
if( have_torsions && torsionIndex < n_torsions ) |
| 260 |
|
torsions[torsionIndex] = the_torsion; |
| 261 |
|
else{ |
| 262 |
|
if( have_torsions ){ |
| 263 |
< |
sprintf( err, "MoleculeStamp error, %d out of nTorsions range", |
| 263 |
> |
sprintf( errMsg, "MoleculeStamp error, %d out of nTorsions range", |
| 264 |
|
torsionIndex ); |
| 265 |
< |
return strdup( err ); |
| 265 |
> |
return strdup( errMsg ); |
| 266 |
|
} |
| 267 |
|
else return strdup("MoleculeStamp error, nTorsions not given before" |
| 268 |
|
"first torsion declaration." ); |
| 275 |
|
|
| 276 |
|
int i; |
| 277 |
|
short int no_atom; |
| 264 |
– |
char err[120]; |
| 278 |
|
|
| 279 |
|
if( !have_name || !have_atoms ){ |
| 280 |
|
if( !have_name ) return strdup( "MoleculeStamp error. Molecule's name" |
| 288 |
|
} |
| 289 |
|
|
| 290 |
|
if( no_atom ){ |
| 291 |
< |
sprintf( err, |
| 291 |
> |
sprintf( errMsg, |
| 292 |
|
"MoleculeStamp error. Not all of the atoms were" |
| 293 |
|
" declared in molecule \"%s\".\n", name ); |
| 294 |
< |
return strdup( err ); |
| 294 |
> |
return strdup( errMsg ); |
| 295 |
|
} |
| 296 |
|
|
| 297 |
|
return NULL; |