[ViewVC] Diff of: group/trunk/mattDisertation/disertation.bib

Comparing trunk/mattDisertation/disertation.bib (file contents):
Revision 1054 by mmeineke, Mon Feb 16 20:35:58 2004 UTC vs.
Revision 1083 by mmeineke, Fri Mar 5 00:07:19 2004 UTC

+@Article{venable00,
+  author =       {R.~M. Venable and B.~R. Brooks and R.~W. Pastor},
-<
+  title =        {MOlecular dynamics simulations of gel ($L_{\betaI}$) phase lipid bilayers in constant pressure and constant surface area ensembles},
->
+  title =        {Molecular dynamics simulations of gel ($L_{\beta I}$) phase lipid bilayers in constant pressure and constant surface area ensembles},
+  journal =      jcp,
+  year =         2000,
+  volume =       112,
+@Article{lindahl00,
+  author =       {E. Lindahl and O. Edholm},
-<
+  title =        {Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamicxs simulations},
->
+  title =        {Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations},
+  journal =      {Biophysical Journal},
+  year =         2000,
+  volume =       79,
+  year =         1995,
+  volume =       1,
+  pages =        77
-+
+}
-+
-+
+@Article{marrink:2002,
-+
+  author =       {S.~J. Marrink and D.~P. Teileman},
-+
+  title =        {Molecular Dynamics Simulation of Spontaneous Membrane Fusion during a Cubic-Hexagonal Phase Transition},
-+
+  journal =      {Biophysical Journal},
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+  year =         2002,
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+  volume =       83,
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+  pages =        {2386-2392}
-+
+}
-+
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+@Article{sum:2003,
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+  author =       {A.~K. Sum and J.~J. de~Pablo},
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+  title =        {Molecular Simulation Study on the influence of Dimethylsulfoxide on the structure of Phospholipid Bilayers},
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+  journal =      {Biophysical Journal},
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+  year =         2003,
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+  volume =       85,
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+  pages =        {3636-3645}
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+}
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+@Article{gomez:2003,
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+  author =       {J.~D. Faraldo-Gomez and G.~R. Smith and M.~S.P. Sansom},
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+  title =        {Setting up and optimization of membrane protein simulations},
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+  journal =      {Eur. Biophys. J.},
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+  year =         2002,
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+  volume =       31,
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+  pages =        {217-227}
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+}
-+
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+@Article{smondyrev:1999,
-+
+  author =       {A.~M. Smondyrev and M.~L. Berkowitz},
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+  title =        {Molecular Dynamics Simulation of DPPC Bilayer in DMSO},
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+  journal =      {Biophysical Journal},
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+  year =         1999,
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+  volume =       76,
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+  pages =        {2472-2478}
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+@Article{nina:2002,
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+  author =       {M. Nina and T. Simonson},
-+
+  title =        {Molecular Dynamics of the $\text{tRNA}^{\text{Ala}}$ Acceptor Stem: Comparison between Continuum Reaction Field and Particle-Mesh Ewald Electrostatic Treatments},
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+  journal =      {J. Phys. Chem. B},
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+  year =         2002,
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+  volume =       106,
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+  pages =        {3696-3705}
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+}
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+@Article{norberg:2000,
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+  author =       {J. Norberg and L. Nilsson},
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+  title =        {On the truncation od Long-Range Electrostatic Interactions in DNA},
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+  journal =      {Biophysical Journal},
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+  year =         2000,
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+  volume =       79,
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+  pages =        {1537-1553}
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+}
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+@Article{patra:2003,
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+  author =       {M. Patra and M. Karttunen and M.~T. Hyv\"{o}nen and E. Falk and P. Lindqvist and I. Vattulainen},
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+  title =        {Molecular Dynamics Simulations of Lipid Bilayers: Major Artifacts Due to Truncating Electrostatic Interactions},
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+  journal =      {Biophysical Journal},
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+  year =         2003,
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+  volume =       84,
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+  pages =        {3636-3645}
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+}
-+
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+@Article{marrink04,
-+
+  author =       {S.~J. Marrink and A.~H. de~Vries and A.~E. Mark},
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+  title =        {Coarse Grained Model for Semiquantitative Lipid Simulations},
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+  journal =      {J. Phys. Chem. B},
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+  year =         2004,
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+  volume =       108,
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+  pages =        {750-760}
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+}
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+@Article{andersen83,
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+  author =       {H.~C. Andersen},
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+  title =        {Rattle: A Velocity Version of the Shake Algorithm for Molecular Dynamics Calculations},
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+  journal =      {Journal of Computational Physics},
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+  year =         1983,
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+  volume =       52,
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+  pages =        {24-34}
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+}
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+@Article{hura00,
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+  author =       {G. Hura and J.~M. Sorenson and R.~M. Glaeser and T. Head-Gordon},
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+  title =        {A high-quality x-ray scattering experiment on liquid water at ambient conditions},
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+  journal =      {J. Chem. Phys.},
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+  year =         2000,
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+  volume =       113,
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+  pages =        {9140-9148}
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+}
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+@Article{ryckaert77,
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+  author =       {J.~P. Ryckaert and G. Ciccotti and H.~J.~C. Berendsen},
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+  title =        {Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes},
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+  journal =      {Journal of Computational Physics},
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+  year =         1977,
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+  volume =       23,
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+  pages =        {327-341}
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+}
-+
-+
-+
+@InBook{fowles99:lagrange,
-+
+  author =       {G.~R. Fowles and G.~L. Cassiday},
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+  title =        {Analytical Mechanics},
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+  chapter =      10,
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+  publisher =    {Saunders College Publishing},
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+  year =         1999,
-+
+  edition =      {6th}
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+}
-+
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+@Article{petrache00,
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+  author =       {H.~I. Petrache and S.~W. Dodd and M.~F. Brown},
-+
+  title =        {Area per Lipid and Acyl Length Distributions in Fluid Phosphatidylcholines Determined by $^2\text{H}$ NMR Spectroscopy},
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+  journal =      {Biophysical Journal},
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+  year =         2000,
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+  volume =       79,
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+  pages =        {3172-3192}
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+}
-+
-+
+@Article{egberts88,
-+
+  author =       {E. Egberts and H.~J.~C. Berendsen},
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+  title =        {Molecular Dynamics Simulation of a smectic liquid crystal with atomic detail},
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+  journal =      {J. Chem. Phys.},
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+  year =         1988,
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+  volume =       89,
-+
+  pages =        {3718-3732}
-+
+}
-+

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Comparing trunk/mattDisertation/disertation.bib (file contents): Revision 1054 by mmeineke, Mon Feb 16 20:35:58 2004 UTC vs. Revision 1083 by mmeineke, Fri Mar 5 00:07:19 2004 UTC

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Comparing trunk/mattDisertation/disertation.bib (file contents):
Revision 1054 by mmeineke, Mon Feb 16 20:35:58 2004 UTC vs.
Revision 1083 by mmeineke, Fri Mar 5 00:07:19 2004 UTC