| 1 |
chrisfen |
1453 |
%\documentclass[prb,aps,twocolumn,tabularx]{revtex4} |
| 2 |
gezelter |
1463 |
\documentclass[11pt]{article} |
| 3 |
chrisfen |
1453 |
%\documentclass[11pt]{article} |
| 4 |
gezelter |
1463 |
\usepackage{endfloat} |
| 5 |
chrisfen |
1453 |
\usepackage{amsmath} |
| 6 |
|
|
\usepackage{epsf} |
| 7 |
|
|
\usepackage{berkeley} |
| 8 |
gezelter |
1463 |
\usepackage{setspace} |
| 9 |
|
|
\usepackage{tabularx} |
| 10 |
chrisfen |
1453 |
\usepackage{graphicx} |
| 11 |
gezelter |
1463 |
\usepackage[ref]{overcite} |
| 12 |
|
|
\pagestyle{plain} |
| 13 |
|
|
\pagenumbering{arabic} |
| 14 |
|
|
\oddsidemargin 0.0cm \evensidemargin 0.0cm |
| 15 |
|
|
\topmargin -21pt \headsep 10pt |
| 16 |
|
|
\textheight 9.0in \textwidth 6.5in |
| 17 |
|
|
\brokenpenalty=10000 |
| 18 |
|
|
\renewcommand{\baselinestretch}{1.2} |
| 19 |
|
|
\renewcommand\citemid{\ } % no comma in optional reference note |
| 20 |
chrisfen |
1453 |
|
| 21 |
|
|
\begin{document} |
| 22 |
|
|
|
| 23 |
gezelter |
1463 |
\title{Ice-{\it i}: a novel ice polymorph predicted via computer simulation} |
| 24 |
chrisfen |
1453 |
|
| 25 |
gezelter |
1463 |
\author{Christopher J. Fennell and J. Daniel Gezelter \\ |
| 26 |
|
|
Department of Chemistry and Biochemistry\\ University of Notre Dame\\ |
| 27 |
chrisfen |
1453 |
Notre Dame, Indiana 46556} |
| 28 |
|
|
|
| 29 |
|
|
\date{\today} |
| 30 |
|
|
|
| 31 |
gezelter |
1463 |
\maketitle |
| 32 |
chrisfen |
1453 |
%\doublespacing |
| 33 |
|
|
|
| 34 |
|
|
\begin{abstract} |
| 35 |
chrisfen |
1459 |
The free energies of several ice polymorphs in the low pressure regime |
| 36 |
gezelter |
1463 |
were calculated using thermodynamic integration. These integrations |
| 37 |
|
|
were done for most of the common water models. Ice-{\it i}, a |
| 38 |
|
|
structure we recently observed to be stable in one of the single-point |
| 39 |
|
|
water models, was determined to be the stable crystalline state (at 1 |
| 40 |
|
|
atm) for {\it all} the water models investigated. Phase diagrams were |
| 41 |
|
|
generated, and phase coexistence lines were determined for all of the |
| 42 |
|
|
known low-pressure ice structures under all of the common water |
| 43 |
|
|
models. Additionally, potential truncation was shown to have an |
| 44 |
|
|
effect on the calculated free energies, and can result in altered free |
| 45 |
|
|
energy landscapes. |
| 46 |
chrisfen |
1453 |
\end{abstract} |
| 47 |
|
|
|
| 48 |
|
|
%\narrowtext |
| 49 |
|
|
|
| 50 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 51 |
|
|
% BODY OF TEXT |
| 52 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 53 |
|
|
|
| 54 |
|
|
\section{Introduction} |
| 55 |
|
|
|
| 56 |
gezelter |
1463 |
Molecular dynamics is a valuable tool for studying the phase behavior |
| 57 |
|
|
of systems ranging from small or simple |
| 58 |
chrisfen |
1462 |
molecules\cite{Matsumoto02andOthers} to complex biological |
| 59 |
gezelter |
1463 |
species.\cite{bigStuff} Many techniques have been developed to |
| 60 |
|
|
investigate the thermodynamic properites of model substances, |
| 61 |
chrisfen |
1459 |
providing both qualitative and quantitative comparisons between |
| 62 |
|
|
simulations and experiment.\cite{thermMethods} Investigation of these |
| 63 |
|
|
properties leads to the development of new and more accurate models, |
| 64 |
|
|
leading to better understanding and depiction of physical processes |
| 65 |
|
|
and intricate molecular systems. |
| 66 |
|
|
|
| 67 |
|
|
Water has proven to be a challenging substance to depict in |
| 68 |
gezelter |
1463 |
simulations, and a variety of models have been developed to describe |
| 69 |
|
|
its behavior under varying simulation |
| 70 |
chrisfen |
1462 |
conditions.\cite{Berendsen81,Jorgensen83,Bratko85,Berendsen87,Liu96,Mahoney00,Fennell04} |
| 71 |
gezelter |
1463 |
These models have been used to investigate important physical |
| 72 |
chrisfen |
1462 |
phenomena like phase transitions and the hydrophobic |
| 73 |
gezelter |
1463 |
effect.\cite{evenMorePapers} With the choice of models available, it |
| 74 |
|
|
is only natural to compare the models under interesting thermodynamic |
| 75 |
|
|
conditions in an attempt to clarify the limitations of each of the |
| 76 |
|
|
models.\cite{modelProps} Two important property to quantify are the |
| 77 |
|
|
Gibbs and Helmholtz free energies, particularly for the solid forms of |
| 78 |
|
|
water. Difficulty in these types of studies typically arises from the |
| 79 |
|
|
assortment of possible crystalline polymorphs that water adopts over a |
| 80 |
|
|
wide range of pressures and temperatures. There are currently 13 |
| 81 |
|
|
recognized forms of ice, and it is a challenging task to investigate |
| 82 |
|
|
the entire free energy landscape.\cite{Sanz04} Ideally, research is |
| 83 |
|
|
focused on the phases having the lowest free energy at a given state |
| 84 |
|
|
point, because these phases will dictate the true transition |
| 85 |
|
|
temperatures and pressures for their respective model. |
| 86 |
chrisfen |
1459 |
|
| 87 |
|
|
In this paper, standard reference state methods were applied to the |
| 88 |
|
|
study of crystalline water polymorphs in the low pressure regime. This |
| 89 |
|
|
work is unique in the fact that one of the crystal lattices was |
| 90 |
|
|
arrived at through crystallization of a computationally efficient |
| 91 |
|
|
water model under constant pressure and temperature |
| 92 |
|
|
conditions. Crystallization events are interesting in and of |
| 93 |
chrisfen |
1462 |
themselves\cite{Matsumoto02,Yamada02}; however, the crystal structure |
| 94 |
chrisfen |
1459 |
obtained in this case was different from any previously observed ice |
| 95 |
|
|
polymorphs, in experiment or simulation.\cite{Fennell04} This crystal |
| 96 |
|
|
was termed Ice-{\it i} in homage to its origin in computational |
| 97 |
|
|
simulation. The unit cell (Fig. \ref{iceiCell}A) consists of eight |
| 98 |
|
|
water molecules that stack in rows of interlocking water |
| 99 |
|
|
tetramers. Proton ordering can be accomplished by orienting two of the |
| 100 |
|
|
waters so that both of their donated hydrogen bonds are internal to |
| 101 |
|
|
their tetramer (Fig. \ref{protOrder}). As expected in an ice crystal |
| 102 |
|
|
constructed of water tetramers, the hydrogen bonds are not as linear |
| 103 |
|
|
as those observed in ice $I_h$, however the interlocking of these |
| 104 |
|
|
subunits appears to provide significant stabilization to the overall |
| 105 |
|
|
crystal. The arrangement of these tetramers results in surrounding |
| 106 |
|
|
open octagonal cavities that are typically greater than 6.3 \AA\ in |
| 107 |
|
|
diameter. This relatively open overall structure leads to crystals |
| 108 |
|
|
that are 0.07 g/cm$^3$ less dense on average than ice $I_h$. |
| 109 |
gezelter |
1463 |
|
| 110 |
chrisfen |
1460 |
\begin{figure} |
| 111 |
gezelter |
1463 |
\includegraphics[width=\linewidth]{unitCell.eps} |
| 112 |
chrisfen |
1461 |
\caption{Unit cells for (A) Ice-{\it i} and (B) Ice-2{\it i}, the elongated variant of Ice-{\it i}. For Ice-{\it i}, the $a$ to $c$ relation is given by $a = 2.1214c$, while for Ice-2{\it i}, $a = 1.7850c$.} |
| 113 |
chrisfen |
1460 |
\label{iceiCell} |
| 114 |
|
|
\end{figure} |
| 115 |
gezelter |
1463 |
|
| 116 |
chrisfen |
1460 |
\begin{figure} |
| 117 |
gezelter |
1463 |
\includegraphics[width=\linewidth]{orderedIcei.eps} |
| 118 |
chrisfen |
1460 |
\caption{Image of a proton ordered crystal of Ice-{\it i} looking |
| 119 |
|
|
down the (001) crystal face. The rows of water tetramers surrounded by |
| 120 |
|
|
octagonal pores leads to a crystal structure that is significantly |
| 121 |
|
|
less dense than ice $I_h$.} |
| 122 |
|
|
\label{protOrder} |
| 123 |
|
|
\end{figure} |
| 124 |
chrisfen |
1459 |
|
| 125 |
|
|
Results in the previous study indicated that Ice-{\it i} is the |
| 126 |
|
|
minimum energy crystal structure for the single point water models |
| 127 |
|
|
being studied (for discussions on these single point dipole models, |
| 128 |
|
|
see the previous work and related |
| 129 |
|
|
articles\cite{Fennell04,Ichiye96,Bratko85}). Those results only |
| 130 |
|
|
consider energetic stabilization and neglect entropic contributions to |
| 131 |
|
|
the overall free energy. To address this issue, the absolute free |
| 132 |
|
|
energy of this crystal was calculated using thermodynamic integration |
| 133 |
|
|
and compared to the free energies of cubic and hexagonal ice $I$ (the |
| 134 |
|
|
experimental low density ice polymorphs) and ice B (a higher density, |
| 135 |
|
|
but very stable crystal structure observed by B\`{a}ez and Clancy in |
| 136 |
|
|
free energy studies of SPC/E).\cite{Baez95b} This work includes |
| 137 |
|
|
results for the water model from which Ice-{\it i} was crystallized |
| 138 |
|
|
(soft sticky dipole extended, SSD/E) in addition to several common |
| 139 |
|
|
water models (TIP3P, TIP4P, TIP5P, and SPC/E) and a reaction field |
| 140 |
|
|
parametrized single point dipole water model (soft sticky dipole |
| 141 |
|
|
reaction field, SSD/RF). In should be noted that a second version of |
| 142 |
|
|
Ice-{\it i} (Ice-2{\it i}) was used in calculations involving SPC/E, |
| 143 |
|
|
TIP4P, and TIP5P. The unit cell of this crystal (Fig. \ref{iceiCell}B) |
| 144 |
|
|
is similar to the Ice-{\it i} unit it is extended in the direction of |
| 145 |
|
|
the (001) face and compressed along the other two faces. |
| 146 |
|
|
|
| 147 |
chrisfen |
1453 |
\section{Methods} |
| 148 |
|
|
|
| 149 |
chrisfen |
1454 |
Canonical ensemble (NVT) molecular dynamics calculations were |
| 150 |
|
|
performed using the OOPSE (Object-Oriented Parallel Simulation Engine) |
| 151 |
|
|
molecular mechanics package. All molecules were treated as rigid |
| 152 |
chrisfen |
1459 |
bodies, with orientational motion propagated using the symplectic DLM |
| 153 |
chrisfen |
1454 |
integration method. Details about the implementation of these |
| 154 |
|
|
techniques can be found in a recent publication.\cite{Meineke05} |
| 155 |
|
|
|
| 156 |
|
|
Thermodynamic integration was utilized to calculate the free energy of |
| 157 |
chrisfen |
1456 |
several ice crystals at 200 K using the TIP3P, TIP4P, TIP5P, SPC/E, |
| 158 |
|
|
SSD/RF, and SSD/E water models. Liquid state free energies at 300 and |
| 159 |
|
|
400 K for all of these water models were also determined using this |
| 160 |
|
|
same technique, in order to determine melting points and generate |
| 161 |
|
|
phase diagrams. All simulations were carried out at densities |
| 162 |
|
|
resulting in a pressure of approximately 1 atm at their respective |
| 163 |
|
|
temperatures. |
| 164 |
chrisfen |
1454 |
|
| 165 |
chrisfen |
1458 |
A single thermodynamic integration involves a sequence of simulations |
| 166 |
|
|
over which the system of interest is converted into a reference system |
| 167 |
|
|
for which the free energy is known. This transformation path is then |
| 168 |
|
|
integrated in order to determine the free energy difference between |
| 169 |
|
|
the two states: |
| 170 |
|
|
\begin{equation} |
| 171 |
|
|
\Delta A = \int_0^1\left\langle\frac{\partial V(\lambda |
| 172 |
|
|
)}{\partial\lambda}\right\rangle_\lambda d\lambda, |
| 173 |
|
|
\end{equation} |
| 174 |
|
|
where $V$ is the interaction potential and $\lambda$ is the |
| 175 |
chrisfen |
1459 |
transformation parameter that scales the overall |
| 176 |
|
|
potential. Simulations are distributed unevenly along this path in |
| 177 |
|
|
order to sufficiently sample the regions of greatest change in the |
| 178 |
|
|
potential. Typical integrations in this study consisted of $\sim$25 |
| 179 |
|
|
simulations ranging from 300 ps (for the unaltered system) to 75 ps |
| 180 |
|
|
(near the reference state) in length. |
| 181 |
chrisfen |
1458 |
|
| 182 |
chrisfen |
1454 |
For the thermodynamic integration of molecular crystals, the Einstein |
| 183 |
|
|
Crystal is chosen as the reference state that the system is converted |
| 184 |
|
|
to over the course of the simulation. In an Einstein Crystal, the |
| 185 |
|
|
molecules are harmonically restrained at their ideal lattice locations |
| 186 |
|
|
and orientations. The partition function for a molecular crystal |
| 187 |
|
|
restrained in this fashion has been evaluated, and the Helmholtz Free |
| 188 |
|
|
Energy ({\it A}) is given by |
| 189 |
|
|
\begin{eqnarray} |
| 190 |
|
|
A = E_m\ -\ kT\ln \left (\frac{kT}{h\nu}\right )^3&-&kT\ln \left |
| 191 |
|
|
[\pi^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{A}kT}{h^2}\right |
| 192 |
|
|
)^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{B}kT}{h^2}\right |
| 193 |
|
|
)^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{C}kT}{h^2}\right |
| 194 |
|
|
)^\frac{1}{2}\right ] \nonumber \\ &-& kT\ln \left [\frac{kT}{2(\pi |
| 195 |
|
|
K_\omega K_\theta)^{\frac{1}{2}}}\exp\left |
| 196 |
|
|
(-\frac{kT}{2K_\theta}\right)\int_0^{\left (\frac{kT}{2K_\theta}\right |
| 197 |
|
|
)^\frac{1}{2}}\exp(t^2)\mathrm{d}t\right ], |
| 198 |
|
|
\label{ecFreeEnergy} |
| 199 |
|
|
\end{eqnarray} |
| 200 |
|
|
where $2\pi\nu = (K_\mathrm{v}/m)^{1/2}$.\cite{Baez95a} In equation |
| 201 |
|
|
\ref{ecFreeEnergy}, $K_\mathrm{v}$, $K_\mathrm{\theta}$, and |
| 202 |
|
|
$K_\mathrm{\omega}$ are the spring constants restraining translational |
| 203 |
|
|
motion and deflection of and rotation around the principle axis of the |
| 204 |
|
|
molecule respectively (Fig. \ref{waterSpring}), and $E_m$ is the |
| 205 |
|
|
minimum potential energy of the ideal crystal. In the case of |
| 206 |
|
|
molecular liquids, the ideal vapor is chosen as the target reference |
| 207 |
|
|
state. |
| 208 |
gezelter |
1463 |
|
| 209 |
chrisfen |
1456 |
\begin{figure} |
| 210 |
gezelter |
1463 |
\includegraphics[width=\linewidth]{rotSpring.eps} |
| 211 |
chrisfen |
1456 |
\caption{Possible orientational motions for a restrained molecule. |
| 212 |
|
|
$\theta$ angles correspond to displacement from the body-frame {\it |
| 213 |
|
|
z}-axis, while $\omega$ angles correspond to rotation about the |
| 214 |
|
|
body-frame {\it z}-axis. $K_\theta$ and $K_\omega$ are spring |
| 215 |
|
|
constants for the harmonic springs restraining motion in the $\theta$ |
| 216 |
|
|
and $\omega$ directions.} |
| 217 |
|
|
\label{waterSpring} |
| 218 |
|
|
\end{figure} |
| 219 |
chrisfen |
1454 |
|
| 220 |
chrisfen |
1456 |
Charge, dipole, and Lennard-Jones interactions were modified by a |
| 221 |
chrisfen |
1462 |
cubic switching between 100\% and 85\% of the cutoff value (9 \AA |
| 222 |
|
|
). By applying this function, these interactions are smoothly |
| 223 |
|
|
truncated, thereby avoiding poor energy conserving dynamics resulting |
| 224 |
|
|
from harsher truncation schemes. The effect of a long-range correction |
| 225 |
|
|
was also investigated on select model systems in a variety of |
| 226 |
|
|
manners. For the SSD/RF model, a reaction field with a fixed |
| 227 |
|
|
dielectric constant of 80 was applied in all |
| 228 |
|
|
simulations.\cite{Onsager36} For a series of the least computationally |
| 229 |
|
|
expensive models (SSD/E, SSD/RF, and TIP3P), simulations were |
| 230 |
|
|
performed with longer cutoffs of 12 and 15 \AA\ to compare with the 9 |
| 231 |
|
|
\AA\ cutoff results. Finally, results from the use of an Ewald |
| 232 |
|
|
summation were estimated for TIP3P and SPC/E by performing |
| 233 |
chrisfen |
1456 |
calculations with Particle-Mesh Ewald (PME) in the TINKER molecular |
| 234 |
chrisfen |
1462 |
mechanics software package.\cite{Tinker} TINKER was chosen because it |
| 235 |
|
|
can also propagate the motion of rigid-bodies, and provides the most |
| 236 |
|
|
direct comparison to the results from OOPSE. The calculated energy |
| 237 |
|
|
difference in the presence and absence of PME was applied to the |
| 238 |
|
|
previous results in order to predict changes in the free energy |
| 239 |
|
|
landscape. |
| 240 |
chrisfen |
1454 |
|
| 241 |
chrisfen |
1456 |
\section{Results and discussion} |
| 242 |
chrisfen |
1454 |
|
| 243 |
chrisfen |
1456 |
The free energy of proton ordered Ice-{\it i} was calculated and |
| 244 |
|
|
compared with the free energies of proton ordered variants of the |
| 245 |
|
|
experimentally observed low-density ice polymorphs, $I_h$ and $I_c$, |
| 246 |
|
|
as well as the higher density ice B, observed by B\`{a}ez and Clancy |
| 247 |
|
|
and thought to be the minimum free energy structure for the SPC/E |
| 248 |
|
|
model at ambient conditions (Table \ref{freeEnergy}).\cite{Baez95b} |
| 249 |
|
|
Ice XI, the experimentally observed proton ordered variant of ice |
| 250 |
|
|
$I_h$, was investigated initially, but it was found not to be as |
| 251 |
|
|
stable as antiferroelectric variants of proton ordered or even proton |
| 252 |
|
|
disordered ice$I_h$.\cite{Davidson84} The proton ordered variant of |
| 253 |
|
|
ice $I_h$ used here is a simple antiferroelectric version that has an |
| 254 |
|
|
8 molecule unit cell. The crystals contained 648 or 1728 molecules for |
| 255 |
|
|
ice B, 1024 or 1280 molecules for ice $I_h$, 1000 molecules for ice |
| 256 |
|
|
$I_c$, or 1024 molecules for Ice-{\it i}. The larger crystal sizes |
| 257 |
|
|
were necessary for simulations involving larger cutoff values. |
| 258 |
chrisfen |
1454 |
|
| 259 |
chrisfen |
1456 |
\begin{table*} |
| 260 |
|
|
\begin{minipage}{\linewidth} |
| 261 |
|
|
\renewcommand{\thefootnote}{\thempfootnote} |
| 262 |
|
|
\begin{center} |
| 263 |
|
|
\caption{Calculated free energies for several ice polymorphs with a |
| 264 |
|
|
variety of common water models. All calculations used a cutoff radius |
| 265 |
|
|
of 9 \AA\ and were performed at 200 K and $\sim$1 atm. Units are |
| 266 |
|
|
kcal/mol. *Ice $I_c$ is unstable at 200 K using SSD/RF.} |
| 267 |
|
|
\begin{tabular}{ l c c c c } |
| 268 |
gezelter |
1463 |
\hline |
| 269 |
chrisfen |
1456 |
\ \quad \ Water Model\ \ & \ \quad \ \ \ \ $I_h$ \ \ & \ \quad \ \ \ \ $I_c$ \ \ & \ \quad \ \ \ \ B \ \ & \ \quad \ \ \ Ice-{\it i} \ \quad \ \\ |
| 270 |
gezelter |
1463 |
\hline |
| 271 |
chrisfen |
1456 |
\ \quad \ TIP3P & \ \quad \ -11.41 & \ \quad \ -11.23 & \ \quad \ -11.82 & \quad -12.30\\ |
| 272 |
|
|
\ \quad \ TIP4P & \ \quad \ -11.84 & \ \quad \ -12.04 & \ \quad \ -12.08 & \quad -12.33\\ |
| 273 |
|
|
\ \quad \ TIP5P & \ \quad \ -11.85 & \ \quad \ -11.86 & \ \quad \ -11.96 & \quad -12.29\\ |
| 274 |
|
|
\ \quad \ SPC/E & \ \quad \ -12.67 & \ \quad \ -12.96 & \ \quad \ -13.25 & \quad -13.55\\ |
| 275 |
|
|
\ \quad \ SSD/E & \ \quad \ -11.27 & \ \quad \ -11.19 & \ \quad \ -12.09 & \quad -12.54\\ |
| 276 |
|
|
\ \quad \ SSD/RF & \ \quad \ -11.51 & \ \quad \ NA* & \ \quad \ -12.08 & \quad -12.29\\ |
| 277 |
|
|
\end{tabular} |
| 278 |
|
|
\label{freeEnergy} |
| 279 |
|
|
\end{center} |
| 280 |
|
|
\end{minipage} |
| 281 |
|
|
\end{table*} |
| 282 |
chrisfen |
1453 |
|
| 283 |
chrisfen |
1456 |
The free energy values computed for the studied polymorphs indicate |
| 284 |
|
|
that Ice-{\it i} is the most stable state for all of the common water |
| 285 |
|
|
models studied. With the free energy at these state points, the |
| 286 |
|
|
temperature and pressure dependence of the free energy was used to |
| 287 |
|
|
project to other state points and build phase diagrams. Figures |
| 288 |
|
|
\ref{tp3phasedia} and \ref{ssdrfphasedia} are example diagrams built |
| 289 |
|
|
from the free energy results. All other models have similar structure, |
| 290 |
|
|
only the crossing points between these phases exist at different |
| 291 |
|
|
temperatures and pressures. It is interesting to note that ice $I$ |
| 292 |
|
|
does not exist in either cubic or hexagonal form in any of the phase |
| 293 |
|
|
diagrams for any of the models. For purposes of this study, ice B is |
| 294 |
|
|
representative of the dense ice polymorphs. A recent study by Sanz |
| 295 |
|
|
{\it et al.} goes into detail on the phase diagrams for SPC/E and |
| 296 |
|
|
TIP4P in the high pressure regime.\cite{Sanz04} |
| 297 |
gezelter |
1463 |
|
| 298 |
chrisfen |
1456 |
\begin{figure} |
| 299 |
|
|
\includegraphics[width=\linewidth]{tp3PhaseDia.eps} |
| 300 |
|
|
\caption{Phase diagram for the TIP3P water model in the low pressure |
| 301 |
|
|
regime. The displayed $T_m$ and $T_b$ values are good predictions of |
| 302 |
|
|
the experimental values; however, the solid phases shown are not the |
| 303 |
|
|
experimentally observed forms. Both cubic and hexagonal ice $I$ are |
| 304 |
|
|
higher in energy and don't appear in the phase diagram.} |
| 305 |
|
|
\label{tp3phasedia} |
| 306 |
|
|
\end{figure} |
| 307 |
gezelter |
1463 |
|
| 308 |
chrisfen |
1456 |
\begin{figure} |
| 309 |
|
|
\includegraphics[width=\linewidth]{ssdrfPhaseDia.eps} |
| 310 |
|
|
\caption{Phase diagram for the SSD/RF water model in the low pressure |
| 311 |
|
|
regime. Calculations producing these results were done under an |
| 312 |
|
|
applied reaction field. It is interesting to note that this |
| 313 |
|
|
computationally efficient model (over 3 times more efficient than |
| 314 |
|
|
TIP3P) exhibits phase behavior similar to the less computationally |
| 315 |
|
|
conservative charge based models.} |
| 316 |
|
|
\label{ssdrfphasedia} |
| 317 |
|
|
\end{figure} |
| 318 |
|
|
|
| 319 |
|
|
\begin{table*} |
| 320 |
|
|
\begin{minipage}{\linewidth} |
| 321 |
|
|
\renewcommand{\thefootnote}{\thempfootnote} |
| 322 |
|
|
\begin{center} |
| 323 |
|
|
\caption{Melting ($T_m$), boiling ($T_b$), and sublimation ($T_s$) |
| 324 |
|
|
temperatures of several common water models compared with experiment.} |
| 325 |
|
|
\begin{tabular}{ l c c c c c c c } |
| 326 |
gezelter |
1463 |
\hline |
| 327 |
chrisfen |
1456 |
\ \ Equilibria Point\ \ & \ \ \ \ \ TIP3P \ \ & \ \ \ \ \ TIP4P \ \ & \ \quad \ \ \ \ TIP5P \ \ & \ \ \ \ \ SPC/E \ \ & \ \ \ \ \ SSD/E \ \ & \ \ \ \ \ SSD/RF \ \ & \ \ \ \ \ Exp. \ \ \\ |
| 328 |
gezelter |
1463 |
\hline |
| 329 |
chrisfen |
1456 |
\ \ $T_m$ (K) & \ \ 269 & \ \ 265 & \ \ 271 & 297 & \ \ - & \ \ 278 & \ \ 273\\ |
| 330 |
|
|
\ \ $T_b$ (K) & \ \ 357 & \ \ 354 & \ \ 337 & 396 & \ \ - & \ \ 349 & \ \ 373\\ |
| 331 |
|
|
\ \ $T_s$ (K) & \ \ - & \ \ - & \ \ - & - & \ \ 355 & \ \ - & \ \ -\\ |
| 332 |
|
|
\end{tabular} |
| 333 |
|
|
\label{meltandboil} |
| 334 |
|
|
\end{center} |
| 335 |
|
|
\end{minipage} |
| 336 |
|
|
\end{table*} |
| 337 |
|
|
|
| 338 |
|
|
Table \ref{meltandboil} lists the melting and boiling temperatures |
| 339 |
|
|
calculated from this work. Surprisingly, most of these models have |
| 340 |
|
|
melting points that compare quite favorably with experiment. The |
| 341 |
|
|
unfortunate aspect of this result is that this phase change occurs |
| 342 |
|
|
between Ice-{\it i} and the liquid state rather than ice $I_h$ and the |
| 343 |
|
|
liquid state. These results are actually not contrary to previous |
| 344 |
|
|
studies in the literature. Earlier free energy studies of ice $I$ |
| 345 |
|
|
using TIP4P predict a $T_m$ ranging from 214 to 238 K (differences |
| 346 |
|
|
being attributed to choice of interaction truncation and different |
| 347 |
|
|
ordered and disordered molecular arrangements). If the presence of ice |
| 348 |
|
|
B and Ice-{\it i} were omitted, a $T_m$ value around 210 K would be |
| 349 |
|
|
predicted from this work. However, the $T_m$ from Ice-{\it i} is |
| 350 |
|
|
calculated at 265 K, significantly higher in temperature than the |
| 351 |
|
|
previous studies. Also of interest in these results is that SSD/E does |
| 352 |
|
|
not exhibit a melting point at 1 atm, but it shows a sublimation point |
| 353 |
|
|
at 355 K. This is due to the significant stability of Ice-{\it i} over |
| 354 |
|
|
all other polymorphs for this particular model under these |
| 355 |
|
|
conditions. While troubling, this behavior turned out to be |
| 356 |
chrisfen |
1459 |
advantageous in that it facilitated the spontaneous crystallization of |
| 357 |
chrisfen |
1456 |
Ice-{\it i}. These observations provide a warning that simulations of |
| 358 |
|
|
SSD/E as a ``liquid'' near 300 K are actually metastable and run the |
| 359 |
|
|
risk of spontaneous crystallization. However, this risk changes when |
| 360 |
|
|
applying a longer cutoff. |
| 361 |
|
|
|
| 362 |
chrisfen |
1458 |
\begin{figure} |
| 363 |
|
|
\includegraphics[width=\linewidth]{cutoffChange.eps} |
| 364 |
|
|
\caption{Free energy as a function of cutoff radius for (A) SSD/E, (B) |
| 365 |
|
|
TIP3P, and (C) SSD/RF. Data points omitted include SSD/E: $I_c$ 12 |
| 366 |
|
|
\AA\, TIP3P: $I_c$ 12 \AA\ and B 12 \AA\, and SSD/RF: $I_c$ 9 |
| 367 |
|
|
\AA\. These crystals are unstable at 200 K and rapidly convert into a |
| 368 |
|
|
liquid. The connecting lines are qualitative visual aid.} |
| 369 |
|
|
\label{incCutoff} |
| 370 |
|
|
\end{figure} |
| 371 |
|
|
|
| 372 |
chrisfen |
1457 |
Increasing the cutoff radius in simulations of the more |
| 373 |
|
|
computationally efficient water models was done in order to evaluate |
| 374 |
|
|
the trend in free energy values when moving to systems that do not |
| 375 |
|
|
involve potential truncation. As seen in Fig. \ref{incCutoff}, the |
| 376 |
|
|
free energy of all the ice polymorphs show a substantial dependence on |
| 377 |
|
|
cutoff radius. In general, there is a narrowing of the free energy |
| 378 |
chrisfen |
1459 |
differences while moving to greater cutoff radius. Interestingly, by |
| 379 |
|
|
increasing the cutoff radius, the free energy gap was narrowed enough |
| 380 |
|
|
in the SSD/E model that the liquid state is preferred under standard |
| 381 |
|
|
simulation conditions (298 K and 1 atm). Thus, it is recommended that |
| 382 |
|
|
simulations using this model choose interaction truncation radii |
| 383 |
|
|
greater than 9 \AA\. This narrowing trend is much more subtle in the |
| 384 |
|
|
case of SSD/RF, indicating that the free energies calculated with a |
| 385 |
|
|
reaction field present provide a more accurate picture of the free |
| 386 |
|
|
energy landscape in the absence of potential truncation. |
| 387 |
chrisfen |
1456 |
|
| 388 |
chrisfen |
1457 |
To further study the changes resulting to the inclusion of a |
| 389 |
|
|
long-range interaction correction, the effect of an Ewald summation |
| 390 |
|
|
was estimated by applying the potential energy difference do to its |
| 391 |
|
|
inclusion in systems in the presence and absence of the |
| 392 |
|
|
correction. This was accomplished by calculation of the potential |
| 393 |
|
|
energy of identical crystals with and without PME using TINKER. The |
| 394 |
|
|
free energies for the investigated polymorphs using the TIP3P and |
| 395 |
|
|
SPC/E water models are shown in Table \ref{pmeShift}. TIP4P and TIP5P |
| 396 |
|
|
are not fully supported in TINKER, so the results for these models |
| 397 |
|
|
could not be estimated. The same trend pointed out through increase of |
| 398 |
chrisfen |
1459 |
cutoff radius is observed in these PME results. Ice-{\it i} is the |
| 399 |
chrisfen |
1457 |
preferred polymorph at ambient conditions for both the TIP3P and SPC/E |
| 400 |
|
|
water models; however, there is a narrowing of the free energy |
| 401 |
|
|
differences between the various solid forms. In the case of SPC/E this |
| 402 |
|
|
narrowing is significant enough that it becomes less clear cut that |
| 403 |
|
|
Ice-{\it i} is the most stable polymorph, and is possibly metastable |
| 404 |
|
|
with respect to ice B and possibly ice $I_c$. However, these results |
| 405 |
|
|
do not significantly alter the finding that the Ice-{\it i} polymorph |
| 406 |
|
|
is a stable crystal structure that should be considered when studying |
| 407 |
|
|
the phase behavior of water models. |
| 408 |
chrisfen |
1456 |
|
| 409 |
chrisfen |
1457 |
\begin{table*} |
| 410 |
|
|
\begin{minipage}{\linewidth} |
| 411 |
|
|
\renewcommand{\thefootnote}{\thempfootnote} |
| 412 |
|
|
\begin{center} |
| 413 |
chrisfen |
1458 |
\caption{The free energy of the studied ice polymorphs after applying |
| 414 |
|
|
the energy difference attributed to the inclusion of the PME |
| 415 |
|
|
long-range interaction correction. Units are kcal/mol.} |
| 416 |
chrisfen |
1457 |
\begin{tabular}{ l c c c c } |
| 417 |
gezelter |
1463 |
\hline |
| 418 |
chrisfen |
1457 |
\ \ Water Model \ \ & \ \ \ \ \ $I_h$ \ \ & \ \ \ \ \ $I_c$ \ \ & \ \quad \ \ \ \ B \ \ & \ \ \ \ \ Ice-{\it i} \ \ \\ |
| 419 |
gezelter |
1463 |
\hline |
| 420 |
chrisfen |
1457 |
\ \ TIP3P & \ \ -11.53 & \ \ -11.24 & \ \ -11.51 & \ \ -11.67\\ |
| 421 |
|
|
\ \ SPC/E & \ \ -12.77 & \ \ -12.92 & \ \ -12.96 & \ \ -13.02\\ |
| 422 |
|
|
\end{tabular} |
| 423 |
|
|
\label{pmeShift} |
| 424 |
|
|
\end{center} |
| 425 |
|
|
\end{minipage} |
| 426 |
|
|
\end{table*} |
| 427 |
|
|
|
| 428 |
chrisfen |
1453 |
\section{Conclusions} |
| 429 |
|
|
|
| 430 |
chrisfen |
1458 |
The free energy for proton ordered variants of hexagonal and cubic ice |
| 431 |
|
|
$I$, ice B, and recently discovered Ice-{\it i} where calculated under |
| 432 |
|
|
standard conditions for several common water models via thermodynamic |
| 433 |
|
|
integration. All the water models studied show Ice-{\it i} to be the |
| 434 |
|
|
minimum free energy crystal structure in the with a 9 \AA\ switching |
| 435 |
|
|
function cutoff. Calculated melting and boiling points show |
| 436 |
|
|
surprisingly good agreement with the experimental values; however, the |
| 437 |
|
|
solid phase at 1 atm is Ice-{\it i}, not ice $I_h$. The effect of |
| 438 |
|
|
interaction truncation was investigated through variation of the |
| 439 |
|
|
cutoff radius, use of a reaction field parameterized model, and |
| 440 |
|
|
estimation of the results in the presence of the Ewald summation |
| 441 |
|
|
correction. Interaction truncation has a significant effect on the |
| 442 |
chrisfen |
1459 |
computed free energy values, and may significantly alter the free |
| 443 |
|
|
energy landscape for the more complex multipoint water models. Despite |
| 444 |
|
|
these effects, these results show Ice-{\it i} to be an important ice |
| 445 |
|
|
polymorph that should be considered in simulation studies. |
| 446 |
chrisfen |
1458 |
|
| 447 |
chrisfen |
1459 |
Due to this relative stability of Ice-{\it i} in all manner of |
| 448 |
|
|
investigated simulation examples, the question arises as to possible |
| 449 |
|
|
experimental observation of this polymorph. The rather extensive past |
| 450 |
|
|
and current experimental investigation of water in the low pressure |
| 451 |
|
|
regime leads the authors to be hesitant in ascribing relevance outside |
| 452 |
|
|
of computational models, hence the descriptive name presented. That |
| 453 |
|
|
being said, there are certain experimental conditions that would |
| 454 |
|
|
provide the most ideal situation for possible observation. These |
| 455 |
|
|
include the negative pressure or stretched solid regime, small |
| 456 |
|
|
clusters in vacuum deposition environments, and in clathrate |
| 457 |
|
|
structures involving small non-polar molecules. |
| 458 |
|
|
|
| 459 |
chrisfen |
1453 |
\section{Acknowledgments} |
| 460 |
|
|
Support for this project was provided by the National Science |
| 461 |
|
|
Foundation under grant CHE-0134881. Computation time was provided by |
| 462 |
chrisfen |
1458 |
the Notre Dame High Performance Computing Cluster and the Notre Dame |
| 463 |
|
|
Bunch-of-Boxes (B.o.B) computer cluster (NSF grant DMR-0079647). |
| 464 |
chrisfen |
1453 |
|
| 465 |
|
|
\newpage |
| 466 |
|
|
|
| 467 |
|
|
\bibliographystyle{jcp} |
| 468 |
|
|
\bibliography{iceiPaper} |
| 469 |
|
|
|
| 470 |
|
|
|
| 471 |
|
|
\end{document} |