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1 plouden 4259 %load any "/usepackage" here...
2     \documentclass{pnastwo}
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4     %% ADDITIONAL OPTIONAL STYLE FILES Font specification
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6     %\usepackage{PNASTWOF}
7     \usepackage[version=3]{mhchem}
8     \usepackage[round,numbers,sort&compress]{natbib}
9     \usepackage{fixltx2e}
10     \usepackage{booktabs}
11     \usepackage{multirow}
12 gezelter 4261 \usepackage{tablefootnote}
13    
14 plouden 4259 \bibpunct{(}{)}{,}{n}{,}{,}
15     \bibliographystyle{pnas2011}
16    
17 gezelter 4261 \renewcommand{\thefigure}{S\arabic{figure}}
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19     \renewcommand{\theequation}{S\arabic{equation}}
20     \renewcommand{\thesection}{S\arabic{section}}
21    
22     %% OPTIONAL MACRO DEFINITIONS
23     \def\s{\sigma}
24     %%%%%%%%%%%%
25     %% For PNAS Only:
26     %\url{www.pnas.org/cgi/doi/10.1073/pnas.0709640104}
27     \copyrightyear{2014}
28     \issuedate{Issue Date}
29     \volume{Volume}
30     \issuenumber{Issue Number}
31     %\setcounter{page}{2687} %Set page number here if desired
32     %%%%%%%%%%%%
33    
34 plouden 4259 \begin{document}
35    
36 gezelter 4261 \title{Supporting Information for: \\
37     The different facets of ice have different hydrophilicities: Friction at water /
38     ice-I\textsubscript{h} interfaces}
39    
40     \author{Patrick B. Louden\affil{1}{Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame,
41     IN 46556}
42     \and
43     J. Daniel Gezelter\affil{1}{}}
44    
45     \contributor{Submitted to Proceedings of the National Academy of Sciences
46     of the United States of America}
47    
48     \maketitle
49    
50     \begin{article}
51    
52     \section{Overview}
53     The supporting information contains further details about the model
54     construction, analysis methods, and supplies figures that support the
55     data presented in the main text.
56    
57     \section{Construction of the Ice / Water interfaces}
58     Ice I$_\mathrm{h}$ crystallizes in the hexagonal space group
59     P$6_3/mmc$, and common ice crystals form hexagonal plates with the
60 gezelter 4268 basal face, $\{0~0~0~1\}$, forming the top and bottom of each plate, and
61     the prismatic facet, $\{1~0~\bar{1}~0\}$, forming the sides. In extreme
62 gezelter 4261 temperatures or low water saturation conditions, ice crystals can
63 gezelter 4268 easily form as hollow columns, needles and dendrites. These are
64 gezelter 4261 structures that expose other crystalline facets of the ice to the
65     surroundings. Among the more common facets are the secondary prism,
66     $\{1~1~\bar{2}~0\}$, and pyramidal, $\{2~0~\bar{2}~1\}$, faces.
67    
68     We found it most useful to work with proton-ordered, zero-dipole
69     crystals that expose strips of dangling H-atoms and lone
70 gezelter 4268 pairs~\cite{Buch:2008fk}. Our structures were created starting from
71 gezelter 4261 Structure 6 of Hirsch and Ojam\"{a}e's set of orthorhombic
72     representations for ice-I$_{h}$~\cite{Hirsch04}. This crystal
73     structure was cleaved along the four different facets. The exposed
74     face was reoriented normal to the $z$-axis of the simulation cell, and
75 gezelter 4268 the structures were extended to form large exposed facets in
76 gezelter 4261 rectangular box geometries. Liquid water boxes were created with
77     identical dimensions (in $x$ and $y$) as the ice, with a $z$ dimension
78     of three times that of the ice block, and a density corresponding to 1
79     g / cm$^3$. Each of the ice slabs and water boxes were independently
80     equilibrated at a pressure of 1 atm, and the resulting systems were
81     merged by carving out any liquid water molecules within 3 \AA\ of any
82     atoms in the ice slabs. Each of the combined ice/water systems were
83     then equilibrated at 225K, which is the liquid-ice coexistence
84     temperature for SPC/E water~\cite{Bryk02}. Reference
85     \citealp{Louden13} contains a more detailed explanation of the
86     construction of similar ice/water interfaces. The resulting dimensions
87     as well as the number of ice and liquid water molecules contained in
88     each of these systems are shown in Table S1.
89    
90 gezelter 4268 \section{Further details on the shearing (RNEMD) simulations}
91     All simulations were performed using OpenMD~\cite{OOPSE,openmd}, with a
92     time step of 2 fs and periodic boundary conditions in all three
93     dimensions. Electrostatics were handled using the damped-shifted
94     force real-space electrostatic kernel~\cite{Ewald}. The systems were
95     divided into 100 bins along the $z$-axis for the VSS-RNEMD moves,
96     which were attempted every 2~fs.
97    
98     The interfaces were equilibrated for a total of 10 ns at equilibrium
99     conditions before being exposed to either a shear or thermal gradient.
100     This consisted of 5 ns under a constant temperature (NVT) integrator
101     set to 225~K followed by 5 ns under a microcanonical (NVE) integrator.
102     Weak thermal gradients were allowed to develop using the VSS-RNEMD
103     (NVE) integrator using a small thermal flux ($-2.0\times 10^{-6}$
104     kcal/mol/\AA$^2$/fs) for a duration of 5 ns to allow the gradient to
105     stabilize. The resulting temperature gradient was $\approx$ 10K over
106     the entire box length, which was sufficient to keep the temperature at
107     the interface within $\pm 1$ K of the 225~K target.
108    
109     Velocity gradients were then imposed using the VSS-RNEMD (NVE)
110     integrator with a range of momentum fluxes. These gradients were
111     allowed to stabilize for 1~ns before data collection started. Once
112     established, four successive 0.5~ns runs were performed for each shear
113     rate. During these simulations, configurations of the system were
114     stored every 1~ps, and statistics on the structure and dynamics in
115     each bin were accumulated throughout the simulations. Although there
116     was some small variation in the measured interfacial width between
117     succcessive runs, no indication of bulk melting or crystallization was
118     observed. That is, no large scale changes in the positions of the top
119     and bottom interfaces occurred during the simulations.
120    
121 gezelter 4261 \section{A second method for computing contact angles}
122     In addition to the spherical cap method outlined in the main text, a
123     second method for obtaining the contact angle was described by
124     Ruijter, Blake, and Coninck~\cite{Ruijter99}. This method uses a
125     cylindrical averaging of the droplet's density profile. A threshold
126     density of 0.5 g cm\textsuperscript{-3} is used to estimate the
127     location of the edge of the droplet. The $r$ and $z$-dependence of
128     the droplet's edge is then fit to a circle, and the contact angle is
129     computed from the intersection of the fit circle with the $z$-axis
130     location of the solid surface. Again, for each stored configuration,
131     the density profile in a set of annular shells was computed. Due to
132     large density fluctuations close to the ice, all shells located within
133     2 \AA\ of the ice surface were left out of the circular fits. The
134     height of the solid surface ($z_\mathrm{suface}$) along with the best
135     fitting origin ($z_\mathrm{droplet}$) and radius
136     ($r_\mathrm{droplet}$) of the droplet can then be used to compute the
137     contact angle,
138     \begin{equation}
139     \theta = 90 + \frac{180}{\pi} \sin^{-1}\left(\frac{z_\mathrm{droplet} -
140     z_\mathrm{surface}}{r_\mathrm{droplet}} \right).
141     \end{equation}
142    
143 gezelter 4268 \section{Interfacial widths using structural information}
144 gezelter 4261 To determine the structural widths of the interfaces under shear, each
145     of the systems was divided into 100 bins along the $z$-dimension, and
146     the local tetrahedral order parameter (Eq. 5 in Reference
147     \citealp{Louden13}) was time-averaged in each bin for the duration of
148     the shearing simulation. The spatial dependence of this order
149     parameter, $q(z)$, is the tetrahedrality profile of the interface.
150     The lower panels in figures S2-S5 in the SI show tetrahedrality
151     profiles (in circles) for each of the four interfaces. The $q(z)$
152     function has a range of $(0,1)$, where a value of unity indicates a
153     perfectly tetrahedral environment. The $q(z)$ for the bulk liquid was
154     found to be $\approx~0.77$, while values of $\approx~0.92$ were more
155     common in the ice. The tetrahedrality profiles were fit using a
156     hyperbolic tangent function (see Eq. 6 in Reference
157     \citealp{Louden13}) designed to smoothly fit the bulk to ice
158     transition while accounting for the weak thermal gradient. In panels
159     $b$ and $c$ of the same figures, the resulting thermal and velocity
160     gradients from an imposed kinetic energy and momentum fluxes can be
161     seen. The vertical dotted lines traversing these figures indicate the
162     midpoints of the interfaces as determined by the tetrahedrality
163     profiles.
164    
165 gezelter 4268 \section{Interfacial widths using dynamic information}
166 gezelter 4261 To determine the dynamic widths of the interfaces under shear, each of
167     the systems was divided into bins along the $z$-dimension ($\approx$ 3
168     \AA\ wide) and $C_2(z,t)$ was computed using only those molecules that
169 gezelter 4268 were in the bin at the initial time. To compute these correlation
170     functions, each of the 0.5 ns simulations was followed by a shorter
171     200 ps microcanonical (NVE) simulation in which the positions and
172     orientations of every molecule in the system were recorded every 0.1
173     ps.
174 gezelter 4261
175 gezelter 4268 The time-dependence was fit to a triexponential decay, with three time
176     constants: $\tau_{short}$, measuring the librational motion of the
177     water molecules, $\tau_{middle}$, measuring the timescale for breaking
178     and making of hydrogen bonds, and $\tau_{long}$, corresponding to the
179     translational motion of the water molecules. An additional constant
180     was introduced in the fits to describe molecules in the crystal which
181     do not experience long-time orientational decay.
182 gezelter 4261
183 gezelter 4268 In Figures S6-S9, the $z$-coordinate profiles for the three decay
184     constants, $\tau_{short}$, $\tau_{middle}$, and $\tau_{long}$ for the
185     different interfaces are shown. (Figures S6 \& S7 are new results,
186     and Figures S8 \& S9 are updated plots from Ref \citealp{Louden13}.)
187     In the liquid regions of all four interfaces, we observe
188     $\tau_{middle}$ and $\tau_{long}$ to have approximately consistent
189     values of $3-6$ ps and $30-40$ ps, respectively. Both of these times
190     increase in value approaching the interface. Approaching the
191     interface, we also observe that $\tau_{short}$ decreases from its
192     liquid-state value of $72-76$ fs. The approximate values for the
193     decay constants and the trends approaching the interface match those
194     reported previously for the basal and prismatic interfaces.
195    
196 gezelter 4261 We have estimated the dynamic interfacial width $d_\mathrm{dyn}$ by
197     fitting the profiles of all the three orientational time constants
198     with an exponential decay to the bulk-liquid behavior,
199     \begin{equation}\label{tauFit}
200     \tau(z)\approx\tau_{liquid}+(\tau_{wall}-\tau_{liquid})e^{-(z-z_{wall})/d_\mathrm{dyn}}
201     \end{equation}
202     where $\tau_{liquid}$ and $\tau_{wall}$ are the liquid and projected
203     wall values of the decay constants, $z_{wall}$ is the location of the
204     interface, as measured by the structural order parameter. These
205 gezelter 4268 values are shown in table 1 in the main text. Because the bins must be
206 gezelter 4261 quite wide to obtain reasonable profiles of $C_2(z,t)$, the error
207     estimates for the dynamic widths of the interface are significantly
208     larger than for the structural widths. However, all four interfaces
209     exhibit dynamic widths that are significantly below 1~nm, and are in
210     reasonable agreement with the structural width above.
211    
212 gezelter 4268 \bibliography{iceWater}
213 gezelter 4261 \end{article}
214    
215     \begin{table}[h]
216     \centering
217     \caption{Sizes of the droplet and shearing simulations. Cell
218     dimensions are measured in \AA. \label{tab:method}}
219     \begin{tabular}{r|cccc|ccccc}
220     \toprule
221     \multirow{2}{*}{Interface} & \multicolumn{4}{c|}{Droplet} & \multicolumn{5}{c}{Shearing} \\
222     & $N_\mathrm{ice}$ & $N_\mathrm{droplet}$ & $L_x$ & $L_y$ & $N_\mathrm{ice}$ & $N_\mathrm{liquid}$ & $L_x$ & $L_y$ & $L_z$ \\
223     \midrule
224     Basal $\{0001\}$ & 12960 & 2048 & 134.70 & 140.04 & 900 & 1846 & 23.87 & 35.83 & 98.64 \\
225     Pyramidal $\{2~0~\bar{2}~1\}$ & 11136 & 2048 & 143.75 & 121.41 & 1216 & 2203 & 37.47 & 29.50 & 93.02 \\
226     Prismatic $\{1~0~\bar{1}~0\}$ & 9900 & 2048 & 110.04 & 115.00 & 3000 & 5464 & 35.95 & 35.65 & 205.77 \\
227     Secondary Prism $\{1~1~\bar{2}~0\}$ & 11520 & 2048 & 146.72 & 124.48 & 3840 & 8176 & 71.87 & 31.66 & 161.55 \\
228     \bottomrule
229     \end{tabular}
230     \end{table}
231    
232     %S1: contact angle
233 plouden 4259 \begin{figure}
234 gezelter 4261 \includegraphics[width=\linewidth]{ContactAngle}
235     \caption{\label{fig:ContactAngle} The dynamic contact angle of a
236     droplet after approaching each of the four ice facets. The decay to
237     an equilibrium contact angle displays similar dynamics. Although
238     all the surfaces are hydrophilic, the long-time behavior stabilizes
239     to significantly flatter droplets for the basal and pyramidal
240     facets. This suggests a difference in hydrophilicity for these
241     facets compared with the two prismatic facets.}
242     \end{figure}
243    
244    
245     %S2-S5 are the z-rnemd profiles
246     \begin{figure}
247 plouden 4259 \includegraphics[width=\linewidth]{Pyr_comic_strip}
248     \caption{\label{fig:pyrComic} Properties of the pyramidal interface
249     being sheared through water at 3.8 ms\textsuperscript{-1}. Lower
250     panel: the local tetrahedral order parameter, $q(z)$, (circles) and
251     the hyperbolic tangent fit (turquoise line). Middle panel: the
252     imposed thermal gradient required to maintain a fixed interfacial
253     temperature of 225 K. Upper panel: the transverse velocity gradient
254     that develops in response to an imposed momentum flux. The vertical
255     dotted lines indicate the locations of the midpoints of the two
256     interfaces.}
257     \end{figure}
258    
259     \begin{figure}
260     \includegraphics[width=\linewidth]{SP_comic_strip}
261     \caption{\label{fig:spComic} The secondary prism interface with a shear
262     rate of 3.5 \
263     ms\textsuperscript{-1}. Panel descriptions match those in figure \ref{fig:pyrComic}.}
264     \end{figure}
265    
266     \begin{figure}
267 gezelter 4261 \includegraphics[width=\linewidth]{B_comic_strip}
268     \caption{\label{fig:bComic} The basal interface with a shear
269 plouden 4259 rate of 1.3 \
270     ms\textsuperscript{-1}. Panel descriptions match those in figure \ref{fig:pyrComic}.}
271     \end{figure}
272    
273     \begin{figure}
274 gezelter 4261 \includegraphics[width=\linewidth]{prismatic_comic_strip}
275     \caption{\label{fig:pComic} The prismatic interface with a shear
276 plouden 4259 rate of 2 \
277     ms\textsuperscript{-1}. Panel descriptions match those in figure \ref{fig:pyrComic}.}
278     \end{figure}
279    
280 gezelter 4261 %Figures S6-S9 are the z-orientation times
281 plouden 4259 \begin{figure}
282     \includegraphics[width=\linewidth]{Pyr-orient}
283     \caption{\label{fig:PyrOrient} The three decay constants of the
284     orientational time correlation function, $C_2(z,t)$, for water as a
285     function of distance from the center of the ice slab. The vertical
286     dashed line indicates the edge of the pyramidal ice slab determined
287     by the local order tetrahedral parameter. The control (circles) and
288     sheared (squares) simulations were fit using shifted-exponential
289     decay (see Eq. 9 in Ref. \citealp{Louden13}).}
290     \end{figure}
291    
292     \begin{figure}
293     \includegraphics[width=\linewidth]{SP-orient}
294     \caption{\label{fig:SPorient} Decay constants for $C_2(z,t)$ at the secondary
295     prism face. Panel descriptions match those in \ref{fig:PyrOrient}.}
296     \end{figure}
297    
298    
299     \begin{figure}
300 gezelter 4261 \includegraphics[width=\linewidth]{B-orient}
301     \caption{\label{fig:Borient} Decay constants for $C_2(z,t)$ at the basal face. Panel descriptions match those in \ref{fig:PyrOrient}.}
302 plouden 4259 \end{figure}
303    
304     \begin{figure}
305 gezelter 4261 \includegraphics[width=\linewidth]{prismatic-orient}
306     \caption{\label{fig:Porient} Decay constants for $C_2(z,t)$ at the
307 plouden 4259 prismatic face. Panel descriptions match those in \ref{fig:PyrOrient}.}
308     \end{figure}
309    
310 gezelter 4261
311     \end{document}