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Revision 2610 by chrisfen, Mon Mar 13 14:22:15 2006 UTC vs.
Revision 2630 by chrisfen, Thu Mar 16 15:03:20 2006 UTC

# Line 2 | Line 2
2   %% http://bibdesk.sourceforge.net/
3  
4  
5 < %% Created for Chris Fennell at 2006-03-12 20:26:24 -0500
5 > %% Created for Chris Fennell at 2006-03-16 10:02:01 -0500
6  
7  
8   %% Saved with string encoding Western (ASCII)
# Line 45 | Line 45
45   @STRING{rmp = "Rev. Mod. Phys."}
46  
47  
48 + @article{Weber00,
49 +        Author = {W. Weber and P.~H. H\"{u}nenberger and J.~A. McCammon},
50 +        Date-Added = {2006-03-16 09:49:22 -0500},
51 +        Date-Modified = {2006-03-16 09:51:17 -0500},
52 +        Doi = {10.1021/jp9937757},
53 +        Journal = {J. Phys. Chem. B},
54 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/McCammon_ArtificialEwaldPeriodicityMD_00.pdf},
55 +        Number = {15},
56 +        Pages = {3668-3675},
57 +        Title = {Molecular Dynamics Simulations of a Polyalanine Octapeptide under Ewald Boundary Conditions: Influence of Artificial Periodicity on Peptide Conformation},
58 +        Volume = {104},
59 +        Year = {2000}}
60 +
61 + @article{Hunenberger99,
62 +        Author = {P.~H. H\"{u}nenberger and J.~A. McCammon},
63 +        Date-Added = {2006-03-16 09:45:10 -0500},
64 +        Date-Modified = {2006-03-16 09:49:15 -0500},
65 +        Journal = {Biophys. Chem.},
66 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/McCammon_ArtificialEwaldPeriodicity_99.pdf},
67 +        Pages = {69-88},
68 +        Title = {Effect of artificial periodicity in simulations of biomolecules under Ewald boundary conditions: a continuum electrostatics study},
69 +        Volume = {78},
70 +        Year = {1999}}
71 +
72 + @article{Petersen95,
73 +        Author = {H.~G. Petersen},
74 +        Date-Added = {2006-03-16 08:43:02 -0500},
75 +        Date-Modified = {2006-03-16 08:44:32 -0500},
76 +        Journal = {J. Chem. Phys.},
77 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Petersen_AccuracyofPME_95.pdf},
78 +        Month = {September},
79 +        Number = {9},
80 +        Pages = {3668-3679},
81 +        Title = {Accuracy and efficiency of the particle mesh Ewald method},
82 +        Volume = {103},
83 +        Year = {1995}}
84 +
85 + @article{Luty95,
86 +        Author = {B.~A. Luty and I.~G. Tironi and W.~F. {van~Gunsteren}},
87 +        Date-Added = {2006-03-16 08:39:13 -0500},
88 +        Date-Modified = {2006-03-16 08:41:15 -0500},
89 +        Journal = {J. Chem. Phys.},
90 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Luty_LatticeSumElectrostatics_95.pdf},
91 +        Number = {8},
92 +        Pages = {3014-3021},
93 +        Title = {Lattice-sum methods for calculating electrostatic interactions in molecular simulations},
94 +        Volume = {103},
95 +        Year = {1995}}
96 +
97 + @article{Barker73,
98 +        Author = {J.~A. Barker and R.~O. Watts },
99 +        Date-Added = {2006-03-15 18:58:17 -0500},
100 +        Date-Modified = {2006-03-15 21:17:31 -0500},
101 +        Journal = {Mol. Phys.},
102 +        Pages = {789=792},
103 +        Title = {Monte Carlo studies of the dielectric properties of water-like models},
104 +        Volume = {26},
105 +        Year = {1973}}
106 +
107 + @article{Adams79,
108 +        Author = {D.~J. Adams and E.~M. Adams and G.~J. Hills},
109 +        Date-Added = {2006-03-15 17:46:36 -0500},
110 +        Date-Modified = {2006-03-15 17:48:04 -0500},
111 +        Journal = {Mol. Phys.},
112 +        Number = {2},
113 +        Pages = {387-400},
114 +        Title = {The computer simulation of polar liquids},
115 +        Volume = {38},
116 +        Year = {1979}}
117 +
118 + @article{Rahman71,
119 +        Author = {A. Rahman and F.~H. Stillinger},
120 +        Date-Added = {2006-03-15 17:04:53 -0500},
121 +        Date-Modified = {2006-03-15 17:07:29 -0500},
122 +        Journal = {J. Chem. Phys.},
123 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/WaterSimulation/Rahman_MDWater_71.pdf},
124 +        Month = {October},
125 +        Number = {7},
126 +        Pages = {3336-3359},
127 +        Title = {Molecular Dynamics Study of Liquid Water},
128 +        Volume = {55},
129 +        Year = {1971}}
130 +
131 + @article{Andrea83,
132 +        Author = {T.~A. Andrea and W.~C. Swope and H.~C. Andersen},
133 +        Date-Added = {2006-03-15 15:16:12 -0500},
134 +        Date-Modified = {2006-03-15 15:18:10 -0500},
135 +        Journal = {J. Chem. Phys.},
136 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/WaterSimulation/Andrea_LongRangeForcesInWater_83.pdf},
137 +        Number = {9},
138 +        Pages = {4576-4584},
139 +        Title = {The role of long ranged forces in determining the structure and properties of liquid water},
140 +        Volume = {79},
141 +        Year = {1983}}
142 +
143 + @article{Brush66,
144 +        Author = {S.~G. Brush and H.~L. Sahlin and E. Teller},
145 +        Date-Added = {2006-03-13 16:55:39 -0500},
146 +        Date-Modified = {2006-03-13 17:01:15 -0500},
147 +        Journal = {J. Chem. Phys.},
148 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Brush_MCEwaldApplication_66.pdf},
149 +        Month = {September},
150 +        Number = {6},
151 +        Pages = {2102-2118},
152 +        Title = {Monte Carlo Study of a One-Component Plasma. I},
153 +        Volume = {45},
154 +        Year = {1966}}
155 +
156 + @article{Ewald21,
157 +        Author = {P.~P. Ewald},
158 +        Date-Added = {2006-03-13 13:32:04 -0500},
159 +        Date-Modified = {2006-03-13 13:32:55 -0500},
160 +        Journal = {Ann. Physik},
161 +        Pages = {253},
162 +        Volume = {64},
163 +        Year = {1921}}
164 +
165 + @article{Jones56,
166 +        Author = {R.~E. Jones and D.~H. Templeton},
167 +        Date-Added = {2006-03-13 13:25:58 -0500},
168 +        Date-Modified = {2006-03-13 13:27:15 -0500},
169 +        Journal = {J. Chem. Phys.},
170 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Jones_ChargeShapeFunctions_56.pdf},
171 +        Number = {5},
172 +        Pages = {1062-1063},
173 +        Title = {Optimum Atomic Shape for Bertaut Series},
174 +        Volume = {25},
175 +        Year = {1956}}
176 +
177 + @article{Heyes81,
178 +        Author = {D.~M. Heyes},
179 +        Date-Added = {2006-03-13 13:12:45 -0500},
180 +        Date-Modified = {2006-03-13 13:14:27 -0500},
181 +        Journal = {J. Chem. Phys.},
182 +        Keywords = {Empty Keywords},
183 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Heyes_CoulombChargeSpreading_81.pdf},
184 +        Number = {3},
185 +        Pages = {1924-1929},
186 +        Title = {Electrostatic potentials and fields in infinite point charge lattices},
187 +        Volume = {74},
188 +        Year = {1981}}
189 +
190   @article{Steinbach94,
191          Author = {P.~J. Steinbach and B.~R. Brooks},
192          Date-Added = {2006-03-12 19:26:45 -0500},
# Line 1456 | Line 1598
1598  
1599   @article{Darden93,
1600          Author = {T. Darden and D. York and L. Pedersen},
1601 <        Date-Modified = {2006-02-15 10:09:52 -0500},
1601 >        Date-Modified = {2006-03-16 08:37:25 -0500},
1602          Journal = {Journal of Chemical Physics},
1603 +        Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Darden_ParticleMeshEwald_93.pdf},
1604          Number = 12,
1605          Pages = {10089-10092},
1606          Title = {Particle mesh Ewald: An $N \log N$ method for Ewald sums in large systems},
# Line 1865 | Line 2008
2008  
2009   @article{Marrink03,
2010          Author = {S.~J. Marrink and A.~E. Mark},
2011 <        Date-Modified = {2006-02-15 10:28:41 -0500},
2011 >        Date-Modified = {2006-03-16 09:54:52 -0500},
2012          Journal = {J. Am. Chem. Soc.},
2013          Pages = {15233-15242},
2014 <        Title = {Molecular Dynaimcs Simulation of the Formation, Structure, and Dynamics of Small Phospholipid Vesicles},
2014 >        Title = {Molecular Dynamics Simulation of the Formation, Structure, and Dynamics of Small Phospholipid Vesicles},
2015          Volume = 125,
2016          Year = 2003}
2017  

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