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Revision 2987 by chrisfen, Wed Aug 30 22:36:06 2006 UTC vs.
Revision 3016 by chrisfen, Thu Sep 21 23:21:37 2006 UTC

# Line 1 | Line 1
1 < \chapter{\label{chap:ice}PHASE BEHAVIOR OF WATER IN COMPUTER SIMULATIONS}
1 > \chapter{\label{chap:ice}PHASE BEHAVIOR OF WATER IN COMPUTER \\ SIMULATIONS}
2  
3   As discussed in the previous chapter, water has proven to be a
4   challenging substance to depict in simulations, and a variety of
# Line 220 | Line 220 | methods.\cite{Baez95b}
220   parameter.  This method has been shown to be reversible and provide
221   results in excellent agreement with other established
222   methods.\cite{Baez95b}
223 +
224 + The Helmholtz free energy error was determined in the same manner in
225 + both the solid and the liquid free energy calculations . At each point
226 + along the integration path, we calculated the standard deviation of
227 + the potential energy difference. Addition or subtraction of these
228 + values to each of their respective points and integrating the curve
229 + again provides the upper and lower bounds of the uncertainty in the
230 + Helmholtz free energy.
231  
232   Near the cutoff radius ($0.85 * r_{cut}$), charge, dipole, and
233   Lennard-Jones interactions were gradually reduced by a cubic switching
# Line 427 | Line 435 | Model & I$_\textrm{h}$ & I$_\textrm{c}$ & B & Ice-$i$
435   \cmidrule(lr){2-6}
436   & \multicolumn{5}{c}{(kcal mol$^{-1}$)} \\
437   \midrule
438 < TIP5P-E & -10.76(4) & -10.72(4) & & - & -10.68(4) \\
439 < TIP4P-Ew & & -11.77(3) & & - & -11.60(3) \\
440 < SPC/E & -12.98(3) & -11.60(3) & & - & -12.93(3) \\
441 < SSD/RF & -11.81(4) & -11.65(3) & & -12.41(4) & - \\
442 < TRED & -12.58(3) & -12.44(3) & & -13.09(4) & - \\
438 > TIP5P-E & -11.98(4) & -11.96(4) & & - & -11.95(3) \\
439 > TIP4P-Ew & -13.11(3) & -13.09(3) & -12.97(3) & - & -12.98(3) \\
440 > SPC/E & -12.99(3) & -13.00(3) & -13.03(3) & - & -12.99(3) \\
441 > SSD/RF & -11.83(3) & -11.66(4) & -12.32(3) & -12.39(3) & - \\
442 > TRED & -12.61(3) & -12.43(3) & -12.89(3) & -13.12(3) & - \\
443   \end{tabular}
444   \label{tab:dampedFreeEnergy}
445   \end{table}
446 + The results of these calculations in table \ref{tab:dampedFreeEnergy}
447 + show similar behavior to the Ewald results in figure
448 + \ref{fig:incCutoff}, at least for SSD/RF and SPC/E which are present
449 + in both. The ice polymorph Helmholtz free energies for SSD/RF order in
450 + the same fashion; however Ice-$i$ and ice B are quite a bit closer in
451 + free energy (nearly isoenergetic). The free energy differences between
452 + ice polymorphs for TRED water parallel SSD/RF, with the exception that
453 + ice B is destabilized such that it is not very close to Ice-$i$. The
454 + SPC/E results really show the near isoenergetic behavior when using
455 + the electrostatics correction. Ice B has the lowest Helmholtz free
456 + energy; however, all the polymorph results overlap within error.
457  
458 + The most interesting results from these calculations come from the
459 + more expensive TIP4P-Ew and TIP5P-E results. Both of these models were
460 + optimized for use with an electrostatic correction and are
461 + geometrically arranged to mimic water following two different
462 + ideas. In TIP5P-E, the primary location for the negative charge in the
463 + molecule is assigned to the lone-pairs of the oxygen, while TIP4P-Ew
464 + places the negative charge near the center-of-mass along the H-O-H
465 + bisector. There is some debate as to which is the proper choice for
466 + the negative charge location, and this has in part led to a six-site
467 + water model that balances both of these options.\cite{Vega05,Nada03}
468 + The limited results in table \ref{tab:dampedFreeEnergy} support the
469 + results of Vega {\it et al.}, which indicate the TIP4P charge location
470 + geometry is more physically valid.\cite{Vega05} With the TIP4P-Ew
471 + water model, the experimentally observed polymorph (ice
472 + I$_\textrm{h}$) is the preferred form with ice I$_\textrm{c}$ slightly
473 + higher in energy, though overlapping within error, and the less
474 + realistic ice B and Ice-$i^\prime$ are destabilized relative to these
475 + polymorphs. TIP5P-E shows similar behavior to SPC/E, where there is no
476 + real free energy distinction between the various polymorphs and lend
477 + credence to other results indicating the preferred form of TIP5P at
478 + 1~atm is a structure similar to ice B.\cite{Yamada02,Vega05,Abascal05}
479 + These results indicate that TIP4P-Ew is a better mimic of real water
480 + than these other models when studying crystallization and solid forms
481 + of water.
482  
483   \section{Conclusions}
484  
485   In this work, thermodynamic integration was used to determine the
486   absolute free energies of several ice polymorphs.  The new polymorph,
487 < Ice-{\it i} was observed to be the stable crystalline state for {\it
487 > Ice-$i$ was observed to be the stable crystalline state for {\it
488   all} the water models when using a 9.0~\AA\ cutoff.  However, the free
489   energy partially depends on simulation conditions (particularly on the
490 < choice of long range correction method). Regardless, Ice-{\it i} was
490 > choice of long range correction method). Regardless, Ice-$i$ was
491   still observed to be a stable polymorph for all of the studied water
492   models.
493  
494   So what is the preferred solid polymorph for simulated water?  As
495   indicated above, the answer appears to be dependent both on the
496   conditions and the model used.  In the case of short cutoffs without a
497 < long-range interaction correction, Ice-{\it i} and Ice-$i^\prime$ have
497 > long-range interaction correction, Ice-$i$ and Ice-$i^\prime$ have
498   the lowest free energy of the studied polymorphs with all the models.
499   Ideally, crystallization of each model under constant pressure
500   conditions, as was done with SSD/E, would aid in the identification of
# Line 460 | Line 503 | We also note that none of the water models used in thi
503   insight about important behavior of others.
504  
505   We also note that none of the water models used in this study are
506 < polarizable or flexible models.  It is entirely possible that the
507 < polarizability of real water makes Ice-{\it i} substantially less
508 < stable than ice I$_h$.  However, the calculations presented above seem
509 < interesting enough to communicate before the role of polarizability
510 < (or flexibility) has been thoroughly investigated.
506 > polarizable or flexible models. It is entirely possible that the
507 > polarizability of real water makes Ice-$i$ substantially less stable
508 > than ice I$_\textrm{h}$. The dipole moment of the water molecules
509 > increases as the system becomes more condensed, and the increasing
510 > dipole moment should destabilize the tetramer structures in
511 > Ice-$i$. Right now, using TIP4P-Ew with an electrostatic correction
512 > gives the proper thermodynamically preferred state, and we recommend
513 > this arrangement for study of crystallization processes if the
514 > computational cost increase that comes with including polarizability
515 > is an issue.
516  
517 < Finally, due to the stability of Ice-{\it i} in the investigated
517 > Finally, due to the stability of Ice-$i$ in the investigated
518   simulation conditions, the question arises as to possible experimental
519   observation of this polymorph.  The rather extensive past and current
520   experimental investigation of water in the low pressure regime makes

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