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Revision 3004 by chrisfen, Mon Sep 18 20:32:11 2006 UTC vs.
Revision 3019 by chrisfen, Fri Sep 22 13:45:24 2006 UTC

# Line 246 | Line 246 | in order to predict changes to the free energy landsca
246   of the ice polymorphs.\cite{Ponder87} The calculated energy difference
247   in the presence and absence of PME was applied to the previous results
248   in order to predict changes to the free energy landscape.
249 +
250 + In addition to the above procedures, we also tested how the inclusion
251 + of the Lennard-Jones long-range correction affects the free energy
252 + results. The correction for the Lennard-Jones trucation was included
253 + by integration of the equation discussed in section
254 + \ref{sec:LJCorrections}. Rather than discuss its affect alongside the
255 + free energy results, we will just mention that while the correction
256 + does lower the free energy of the higher density states more than the
257 + lower density states, the effect is so small that it is entirely
258 + overwelmed by the error in the free energy calculation. Since its
259 + inclusion does not influence the results, the Lennard-Jones correction
260 + was omitted from all the calculations below.
261  
262   \section{Initial Free Energy Results}
263  
# Line 435 | Line 447 | Model & I$_\textrm{h}$ & I$_\textrm{c}$ & B & Ice-$i$
447   \cmidrule(lr){2-6}
448   & \multicolumn{5}{c}{(kcal mol$^{-1}$)} \\
449   \midrule
450 < TIP5P-E & -11.98(4) & -11.96(4) & & - & -11.95(3) \\
450 > TIP5P-E & -11.98(4) & -11.96(4) & -11.87(3) & - & -11.95(3) \\
451   TIP4P-Ew & -13.11(3) & -13.09(3) & -12.97(3) & - & -12.98(3) \\
452   SPC/E & -12.99(3) & -13.00(3) & -13.03(3) & - & -12.99(3) \\
453   SSD/RF & -11.83(3) & -11.66(4) & -12.32(3) & -12.39(3) & - \\
# Line 473 | Line 485 | polymorphs. TIP5P-E shows similar behavior to SPC/E, w
485   higher in energy, though overlapping within error, and the less
486   realistic ice B and Ice-$i^\prime$ are destabilized relative to these
487   polymorphs. TIP5P-E shows similar behavior to SPC/E, where there is no
488 < real free energy distinction between the various polymorphs and lend
489 < credence to other results indicating the preferred form of TIP5P at
490 < 1~atm is a structure similar to ice B.\cite{Yamada02,Vega05,Abascal05}
491 < These results indicate that TIP4P-Ew is a better mimic of real water
492 < than these other models when studying crystallization and solid forms
493 < of water.
488 > real free energy distinction between the various polymorphs because
489 > many overlap within error. While ice B is close in free energy to the
490 > other polymorphs, these results fail to support the findings of other
491 > researchers indicating the preferred form of TIP5P at 1~atm is a
492 > structure similar to ice B.\cite{Yamada02,Vega05,Abascal05} It should
493 > be noted that we are looking at TIP5P-E rather than TIP5P, and the
494 > differences in the Lennard-Jones parameters could be a reason for this
495 > dissimilarity.  Overall, these results indicate that TIP4P-Ew is a
496 > better mimic of real water than these other models when studying
497 > crystallization and solid forms of water.
498  
499   \section{Conclusions}
500  
501   In this work, thermodynamic integration was used to determine the
502   absolute free energies of several ice polymorphs.  The new polymorph,
503 < Ice-{\it i} was observed to be the stable crystalline state for {\it
503 > Ice-$i$ was observed to be the stable crystalline state for {\it
504   all} the water models when using a 9.0~\AA\ cutoff.  However, the free
505   energy partially depends on simulation conditions (particularly on the
506 < choice of long range correction method). Regardless, Ice-{\it i} was
506 > choice of long range correction method). Regardless, Ice-$i$ was
507   still observed to be a stable polymorph for all of the studied water
508   models.
509  
510   So what is the preferred solid polymorph for simulated water?  As
511   indicated above, the answer appears to be dependent both on the
512   conditions and the model used.  In the case of short cutoffs without a
513 < long-range interaction correction, Ice-{\it i} and Ice-$i^\prime$ have
513 > long-range interaction correction, Ice-$i$ and Ice-$i^\prime$ have
514   the lowest free energy of the studied polymorphs with all the models.
515   Ideally, crystallization of each model under constant pressure
516   conditions, as was done with SSD/E, would aid in the identification of
# Line 503 | Line 519 | We also note that none of the water models used in thi
519   insight about important behavior of others.
520  
521   We also note that none of the water models used in this study are
522 < polarizable or flexible models.  It is entirely possible that the
523 < polarizability of real water makes Ice-{\it i} substantially less
524 < stable than ice I$_h$.  However, the calculations presented above seem
525 < interesting enough to communicate before the role of polarizability
526 < (or flexibility) has been thoroughly investigated.
522 > polarizable or flexible models. It is entirely possible that the
523 > polarizability of real water makes Ice-$i$ substantially less stable
524 > than ice I$_\textrm{h}$. The dipole moment of the water molecules
525 > increases as the system becomes more condensed, and the increasing
526 > dipole moment should destabilize the tetramer structures in
527 > Ice-$i$. Right now, using TIP4P-Ew with an electrostatic correction
528 > gives the proper thermodynamically preferred state, and we recommend
529 > this arrangement for study of crystallization processes if the
530 > computational cost increase that comes with including polarizability
531 > is an issue.
532  
533 < Finally, due to the stability of Ice-{\it i} in the investigated
533 > Finally, due to the stability of Ice-$i$ in the investigated
534   simulation conditions, the question arises as to possible experimental
535   observation of this polymorph.  The rather extensive past and current
536   experimental investigation of water in the low pressure regime makes

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