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root/group/trunk/SHAPES/shaper.cpp
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Comparing trunk/SHAPES/shaper.cpp (file contents):
Revision 1359 by chrisfen, Mon Jun 28 23:07:18 2004 UTC vs.
Revision 1360 by gezelter, Tue Jul 20 20:02:15 2004 UTC

# Line 94 | Line 94 | int main(int argc, char* argv[]){
94    if (cmdline_parser (argc, argv, &args_info) != 0)
95      exit(1) ;
96  
97 <  if (args_info.input_given){
98 <    fileName = args_info.input_arg;
99 <  }
100 <  else{
97 >
98 >  if (args_info.inputs_num > 0) {
99 >      fileName = args_info.inputs[0];
100 >  } else {
101      std::cerr << "Does not have input file name" << endl;
102      exit(1);
103    }
# Line 223 | Line 223 | int main(int argc, char* argv[]){
223    strcpy(structureFileName, fileName.c_str() );
224  
225    PDBReader* PDBread = new PDBReader();
226 <  PDBread->setPDBfile(structureFileName);
226 >  PDBread->setPDBfileName(structureFileName);
227    theAtoms = PDBread->getAtomList();
228    printf("Found %d atoms\n", theAtoms.size());
229  

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