11 |
|
latticePosY = NULL; |
12 |
|
latticePosZ = NULL; |
13 |
|
|
14 |
+ |
startX = 0.0; |
15 |
+ |
startY = 0.0; |
16 |
+ |
startZ = 0.0; |
17 |
|
|
18 |
|
switch(latticeType){ |
19 |
|
|
33 |
|
hasError = createHcpWaterLattice(latticeParameter); |
34 |
|
break; |
35 |
|
|
36 |
+ |
case ORTHORHOMBIC_LATTICE_TYPE: |
37 |
+ |
hasError = createFccLattice(latticeParameter); |
38 |
+ |
break; |
39 |
+ |
|
40 |
+ |
|
41 |
|
default: |
42 |
|
//simerror here..... |
43 |
|
; |
50 |
|
return; |
51 |
|
} |
52 |
|
|
53 |
+ |
Lattice::Lattice(int latticeType, double latticeParameters[3]){ |
54 |
+ |
int hasError; |
55 |
|
|
56 |
+ |
latticePosX = NULL; |
57 |
+ |
latticePosY = NULL; |
58 |
+ |
latticePosZ = NULL; |
59 |
+ |
|
60 |
+ |
startX = 0.0; |
61 |
+ |
startY = 0.0; |
62 |
+ |
startZ = 0.0; |
63 |
+ |
|
64 |
+ |
switch(latticeType){ |
65 |
+ |
|
66 |
+ |
case ORTHORHOMBIC_LATTICE_TYPE: |
67 |
+ |
hasError = createOrthorhombicLattice(latticeParameters); |
68 |
+ |
break; |
69 |
+ |
|
70 |
+ |
|
71 |
+ |
default: |
72 |
+ |
//simerror here..... |
73 |
+ |
; |
74 |
+ |
} |
75 |
+ |
|
76 |
+ |
latticePosX = new double[nCellSites]; |
77 |
+ |
latticePosY = new double[nCellSites]; |
78 |
+ |
latticePosZ = new double[nCellSites]; |
79 |
+ |
|
80 |
+ |
return; |
81 |
+ |
} |
82 |
+ |
|
83 |
+ |
|
84 |
|
Lattice::~Lattice(void){ |
85 |
|
if (latticePosX != NULL) delete[] latticePosX; |
86 |
|
if (latticePosY != NULL) delete[] latticePosY; |
92 |
|
double cell2; |
93 |
|
double rroot3; |
94 |
|
|
95 |
< |
cellLength = latticeParameter; |
95 |
> |
cellLengthX = latticeParameter; |
96 |
> |
cellLengthY = latticeParameter; |
97 |
> |
cellLengthZ = latticeParameter; |
98 |
|
|
99 |
|
cell2 = 0.5 * latticeParameter; |
100 |
|
rroot3 = 1.0 / sqrt(3.0); |
145 |
|
} |
146 |
|
|
147 |
|
|
148 |
+ |
int Lattice::createOrthorhombicLattice(double latticeParameters[3]){ |
149 |
+ |
double cellx2, celly2, cellz2; |
150 |
+ |
double rroot3; |
151 |
+ |
|
152 |
+ |
cellLengthX = latticeParameters[0]; |
153 |
+ |
cellLengthY = latticeParameters[1]; |
154 |
+ |
cellLengthZ = latticeParameters[2]; |
155 |
+ |
|
156 |
+ |
cellx2 = 0.5 * latticeParameters[0]; |
157 |
+ |
celly2 = 0.5 * latticeParameters[1]; |
158 |
+ |
cellz2 = 0.5 * latticeParameters[2]; |
159 |
+ |
rroot3 = 1.0 / sqrt(3.0); |
160 |
+ |
|
161 |
+ |
nCellSites = 4; |
162 |
+ |
// create new unit cells |
163 |
+ |
thisUnitCell.sx = new double[nCellSites]; |
164 |
+ |
thisUnitCell.sy = new double[nCellSites]; |
165 |
+ |
thisUnitCell.sz = new double[nCellSites]; |
166 |
+ |
thisUnitCell.s_ex = new double[nCellSites]; |
167 |
+ |
thisUnitCell.s_ey = new double[nCellSites]; |
168 |
+ |
thisUnitCell.s_ez = new double[nCellSites]; |
169 |
+ |
|
170 |
+ |
// add members to each unit cell |
171 |
+ |
// Molecule 1 |
172 |
+ |
thisUnitCell.sx[0] = 0.0; |
173 |
+ |
thisUnitCell.sy[0] = 0.0; |
174 |
+ |
thisUnitCell.sz[0] = 0.0; |
175 |
+ |
thisUnitCell.s_ex[0] = rroot3; |
176 |
+ |
thisUnitCell.s_ey[0] = rroot3; |
177 |
+ |
thisUnitCell.s_ez[0] = rroot3; |
178 |
+ |
|
179 |
+ |
// Molecule 2 |
180 |
+ |
thisUnitCell.sx[1] = 0.0; |
181 |
+ |
thisUnitCell.sy[1] = celly2; |
182 |
+ |
thisUnitCell.sz[1] = cellz2; |
183 |
+ |
thisUnitCell.s_ex[1] = -rroot3; |
184 |
+ |
thisUnitCell.s_ey[1] = rroot3; |
185 |
+ |
thisUnitCell.s_ez[1] = -rroot3; |
186 |
+ |
|
187 |
+ |
// Molecule 3 |
188 |
+ |
thisUnitCell.sx[2] = cellx2; |
189 |
+ |
thisUnitCell.sy[2] = celly2; |
190 |
+ |
thisUnitCell.sz[2] = 0.0; |
191 |
+ |
thisUnitCell.s_ex[2] = rroot3; |
192 |
+ |
thisUnitCell.s_ey[2] = -rroot3; |
193 |
+ |
thisUnitCell.s_ez[2] = -rroot3; |
194 |
+ |
|
195 |
+ |
// Molecule 4 |
196 |
+ |
thisUnitCell.sx[3] = cellx2; |
197 |
+ |
thisUnitCell.sy[3] = 0.0; |
198 |
+ |
thisUnitCell.sz[3] = cellz2; |
199 |
+ |
thisUnitCell.s_ex[3] = -rroot3; |
200 |
+ |
thisUnitCell.s_ey[3] = -rroot3; |
201 |
+ |
thisUnitCell.s_ez[3] = rroot3; |
202 |
+ |
|
203 |
+ |
return 0; |
204 |
+ |
} |
205 |
+ |
|
206 |
+ |
|
207 |
|
// Body centered cubic lattice |
208 |
|
int Lattice::createBccLattice(double latticeParameter){ |
209 |
|
return 0; |
362 |
|
|
363 |
|
for( iref=0;iref < nCellSites;iref++){ |
364 |
|
|
365 |
< |
latticePosX[iref] = thisUnitCell.sx[iref] + |
366 |
< |
cellLength * (double( ix ) - 0.5); |
367 |
< |
latticePosY[iref] = thisUnitCell.sy[iref] + |
368 |
< |
cellLength * (double( iy ) - 0.5); |
369 |
< |
latticePosZ[iref] = thisUnitCell.sz[iref] + |
370 |
< |
cellLength * (double( iz ) - 0.5); |
365 |
> |
latticePosX[iref] = startX + thisUnitCell.sx[iref] + |
366 |
> |
cellLengthX * (double( ix ) - 0.5); |
367 |
> |
latticePosY[iref] = startY + thisUnitCell.sy[iref] + |
368 |
> |
cellLengthY * (double( iy ) - 0.5); |
369 |
> |
latticePosZ[iref] = startZ + thisUnitCell.sz[iref] + |
370 |
> |
cellLengthZ * (double( iz ) - 0.5); |
371 |
|
|
372 |
|
} |
373 |
|
|