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#include "simError.h" | 
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Lattice::Lattice(int latticeType, double latticeSpacing){ | 
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Lattice::Lattice(int latticeType, double latticeParameter){ | 
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  int hasError; | 
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 | 
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  latticePosX = NULL; | 
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  latticePosY = NULL; | 
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  latticePosZ = NULL; | 
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 | 
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  startX = 0.0; | 
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  startY = 0.0; | 
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  startZ = 0.0; | 
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  switch(latticeType){ | 
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     | 
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  case FCC_LATTICE_TYPE: | 
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    hasError = createFccLattice(latticeSpacing); | 
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    hasError = createFccLattice(latticeParameter); | 
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    break; | 
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     | 
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  case BCC_LATTICE_TYPE: | 
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    hasError = createBccLattice(latticeSpacing); | 
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    hasError = createBccLattice(latticeParameter); | 
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    break; | 
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     | 
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  case HCP_LATTICE_TYPE: | 
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    hasError = createHcpLattice(latticeSpacing); | 
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    hasError = createHcpLattice(latticeParameter); | 
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    break; | 
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 | 
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  case HCPWATER_LATTICE_TYPE: | 
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    hasError = createHcpWaterLattice(latticeSpacing); | 
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    hasError = createHcpWaterLattice(latticeParameter); | 
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    break; | 
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 | 
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  case ORTHORHOMBIC_LATTICE_TYPE: | 
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    hasError = createFccLattice(latticeParameter); | 
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    break; | 
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 | 
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 | 
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  default: | 
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        //simerror here..... | 
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    //simerror here..... | 
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    ; | 
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  } | 
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   | 
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  latticePosX = new double[nCellSites]; | 
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  latticePosY = new double[nCellSites]; | 
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  latticePosZ = new double[nCellSites]; | 
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   | 
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  return; | 
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} | 
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 | 
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    latticePosX = new double[nCellSites]; | 
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    latticePosY = new double[nCellSites]; | 
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    latticePosZ = new double[nCellSites]; | 
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Lattice::Lattice(int latticeType, double latticeParameters[3]){ | 
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  int hasError; | 
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 | 
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  latticePosX = NULL; | 
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  latticePosY = NULL; | 
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  latticePosZ = NULL; | 
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 | 
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  startX = 0.0; | 
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  startY = 0.0; | 
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  startZ = 0.0; | 
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 | 
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  switch(latticeType){ | 
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     | 
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  case ORTHORHOMBIC_LATTICE_TYPE: | 
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    hasError = createOrthorhombicLattice(latticeParameters); | 
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    break; | 
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  default: | 
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    //simerror here..... | 
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    ; | 
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  } | 
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   | 
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  latticePosX = new double[nCellSites]; | 
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  latticePosY = new double[nCellSites]; | 
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  latticePosZ = new double[nCellSites]; | 
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   | 
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  return; | 
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} | 
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} | 
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 int Lattice::createFccLattice(double latticeSpacing){ | 
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 int Lattice::createFccLattice(double latticeParameter){ | 
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   double cell2; | 
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   double rroot3; | 
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    | 
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   cell2  = 0.5 * latticeSpacing; | 
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   cellLengthX = latticeParameter; | 
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   cellLengthY = latticeParameter; | 
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   cellLengthZ = latticeParameter; | 
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   cell2  = 0.5 * latticeParameter; | 
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   rroot3 = 1.0 / sqrt(3.0); | 
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   nCellSites = 4; | 
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   thisUnitCell.sx[3]   = cell2; | 
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   thisUnitCell.sy[3]   = 0.0; | 
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   thisUnitCell.sz[3]   = cell2; | 
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   thisUnitCell.s_ex[3] = -rroot3; | 
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   thisUnitCell.s_ey[3] = -rroot3; | 
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   thisUnitCell.s_ez[3] = rroot3; | 
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 | 
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     return 0; | 
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 } | 
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 | 
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 int Lattice::createOrthorhombicLattice(double latticeParameters[3]){ | 
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   double cell2; | 
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   double rroot3; | 
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    | 
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   cellLengthX = latticeParameter[0]; | 
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   cellLengthY = latticeParameter[1]; | 
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   cellLengthZ = latticeParameter[2]; | 
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 | 
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   cellx2  = 0.5 * latticeParameter[0]; | 
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   cellx2  = 0.5 * latticeParameter[1]; | 
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   cellx2  = 0.5 * latticeParameter[2]; | 
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   rroot3 = 1.0 / sqrt(3.0); | 
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 | 
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   nCellSites = 4; | 
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   // create new unit cells | 
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   thisUnitCell.sx   = new double[nCellSites]; | 
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   thisUnitCell.sy   = new double[nCellSites]; | 
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   thisUnitCell.sz   = new double[nCellSites]; | 
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   thisUnitCell.s_ex = new double[nCellSites]; | 
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   thisUnitCell.s_ey = new double[nCellSites]; | 
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   thisUnitCell.s_ez = new double[nCellSites]; | 
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 | 
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   // add members to each unit cell | 
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   // Molecule 1 | 
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   thisUnitCell.sx[0]   = 0.0; | 
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   thisUnitCell.sy[0]   = 0.0; | 
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   thisUnitCell.sz[0]   = 0.0; | 
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   thisUnitCell.s_ex[0] = rroot3; | 
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   thisUnitCell.s_ey[0] = rroot3; | 
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   thisUnitCell.s_ez[0] = rroot3; | 
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 | 
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     // Molecule 2 | 
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   thisUnitCell.sx[1]   = 0.0; | 
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   thisUnitCell.sy[1]   = celly2; | 
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   thisUnitCell.sz[1]   = cellz2; | 
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   thisUnitCell.s_ex[1] = -rroot3; | 
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   thisUnitCell.s_ey[1] = rroot3; | 
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   thisUnitCell.s_ez[1] = -rroot3; | 
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      | 
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     // Molecule 3 | 
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   thisUnitCell.sx[2]   = cellx2;  | 
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   thisUnitCell.sy[2]   = celly2; | 
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   thisUnitCell.sz[2]   = 0.0; | 
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   thisUnitCell.s_ex[2] = rroot3; | 
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   thisUnitCell.s_ey[2] = -rroot3; | 
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   thisUnitCell.s_ez[2] = -rroot3; | 
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 | 
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     // Molecule 4 | 
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   thisUnitCell.sx[3]   = cellx2; | 
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   thisUnitCell.sy[3]   = 0.0; | 
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   thisUnitCell.sz[3]   = cellz2; | 
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   thisUnitCell.s_ex[3] = -rroot3; | 
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   thisUnitCell.s_ey[3] = -rroot3; | 
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   thisUnitCell.s_ez[3] = rroot3; | 
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 // Body centered cubic lattice | 
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 int Lattice::createBccLattice(double latticeSpacing){ | 
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 int Lattice::createBccLattice(double latticeParameter){ | 
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   return 0; | 
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 } | 
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 // Standard HCP lattice | 
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 int Lattice::createHcpLattice(double latticeSpacing){ | 
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 int Lattice::createHcpLattice(double latticeParameter){ | 
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   return 0; | 
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 } | 
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 // HCP contains tetrahedral sites for waters  | 
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 int Lattice::createHcpWaterLattice(double latticeSpacing){ | 
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 int Lattice::createHcpWaterLattice(double latticeParameter){ | 
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  | 
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   return 0; | 
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> | 
    | 
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   double rroot3; | 
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   double cell; | 
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   double cell2; | 
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   thisUnitCell.s_ez = new double[nCellSites]; | 
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   | 
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   rroot3 = 1.0 / sqrt(3.0); | 
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   cell   = latticeSpacing; | 
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> | 
   cell   = latticeParameter; | 
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  | 
   cell2  = 0.5  * cell; | 
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  | 
   cell4  = 0.25 * cell; | 
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   cell16 = cell / 6.0; | 
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 | 
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 //Returns lattice points when called repeatedly | 
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 int Lattice::getLatticePoints(double** thePosX, double** thePosY, | 
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                                double** thePosZ, | 
| 359 | 
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                                int ix, int iy, int iz){ | 
| 358 | 
> | 
                double** thePosZ, | 
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> | 
                int ix, int iy, int iz){ | 
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 | 
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   int iref; | 
| 362 | 
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   | 
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  | 
   for( iref=0;iref < nCellSites;iref++){ | 
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 | 
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< | 
     latticePosX[iref] = thisUnitCell.sx[iref] +  | 
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       cellLength * (double( ix ) - 0.5); | 
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     latticePosY[iref] = thisUnitCell.sy[iref] +  | 
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       cellLength * (double( iy ) - 0.5); | 
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< | 
     latticePosZ[iref] = thisUnitCell.sz[iref] +  | 
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       cellLength * (double( iz ) - 0.5); | 
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> | 
     latticePosX[iref] = startX + thisUnitCell.sx[iref] +  | 
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> | 
       cellLengthX * (double( ix ) - 0.5); | 
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> | 
     latticePosY[iref] = startY + thisUnitCell.sy[iref] +  | 
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> | 
       cellLengthY * (double( iy ) - 0.5); | 
| 369 | 
> | 
     latticePosZ[iref] = startZ + thisUnitCell.sz[iref] +  | 
| 370 | 
> | 
       cellLengthZ * (double( iz ) - 0.5); | 
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  | 
      | 
| 372 | 
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   } | 
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