| 1 | #ifndef __MPISIMULATION__ | 
| 2 | #define __MPISIMULATION__ | 
| 3 |  | 
| 4 | #include "SimInfo.hpp" | 
| 5 | #include "MakeStamps.hpp" | 
| 6 | #define __C | 
| 7 | #include "mpiComponentPlan.h" | 
| 8 |  | 
| 9 | #include "fortranWrapDefines.hpp" | 
| 10 |  | 
| 11 | class mpiSimulation{ | 
| 12 | public: | 
| 13 |  | 
| 14 | mpiSimulation(SimInfo* the_entryPlug); | 
| 15 | ~mpiSimulation(); | 
| 16 |  | 
| 17 | void divideLabor(); | 
| 18 |  | 
| 19 | int  getMyNode(void)           { return mpiPlug->myNode; } | 
| 20 | int  getNprocessors(void) { return mpiPlug->nProcessors; } | 
| 21 | int  getLocalNmol( void )         { return mpiPlug->nMolLocal; } | 
| 22 | int  getLocalNatoms( void )       { return mpiPlug->nAtomsLocal; } | 
| 23 | int  getTotAtoms( void )       { return mpiPlug->nAtomsGlobal; } | 
| 24 | int  getTotNmol( void )        { return mpiPlug->nMolGlobal; } | 
| 25 | int* getAtomToProcMap( void )  { return AtomToProcMap; } | 
| 26 | int* getMolToProcMap( void )   { return MolToProcMap; } | 
| 27 | int* getMolComponentType(void) { return MolComponentType; } | 
| 28 | vector<int> getGlobalAtomIndex(void) {return globalAtomIndex; } | 
| 29 | vector<int> getGlobalMolIndex(void) {return globalMolIndex;} | 
| 30 | int getGlobalToLocalMol(int globalIndex) {return globalToLocalMol[globalIndex];} | 
| 31 | int getGlobalToLocalAtom(int globalIndex) {return globalToLocalAtom[globalIndex];} | 
| 32 |  | 
| 33 |  | 
| 34 | //void globalToLocalMol(int globalIndex, int& whichNode, int& localIndex); | 
| 35 | //void globalToLocalAtom(int globalIndex, int& whichNode, int& localIndex); | 
| 36 |  | 
| 37 | // sets the internal function pointer to fortran. | 
| 38 |  | 
| 39 | void setInternal( setFortranMPI_TD fSetup){ | 
| 40 | setFsimParallel = fSetup; | 
| 41 | } | 
| 42 |  | 
| 43 |  | 
| 44 | // call at the begining and after load balancing | 
| 45 |  | 
| 46 | void mpiRefresh( void ); | 
| 47 |  | 
| 48 | protected: | 
| 49 | SimInfo* entryPlug; | 
| 50 | mpiSimData* mpiPlug; | 
| 51 | int *MolToProcMap; | 
| 52 | int *MolComponentType; | 
| 53 | int *AtomToProcMap; | 
| 54 | int *AtomType; | 
| 55 | vector<int> globalAtomIndex; | 
| 56 | vector<int> globalMolIndex; | 
| 57 |  | 
| 58 | vector<int> globalToLocalMol; | 
| 59 | vector<int> globalToLocalAtom; | 
| 60 | // private function to initialize the fortran side of the simulation | 
| 61 | setFortranMPI_TD setFsimParallel; | 
| 62 |  | 
| 63 | // int *myIdents; // is needed by Cpp only. It tells the molecule which stamp it is. | 
| 64 |  | 
| 65 | }; | 
| 66 |  | 
| 67 |  | 
| 68 | /** | 
| 69 | The following pointer is the global declaration of the mpiSim | 
| 70 | object created when the mpiSimulation creation routine is | 
| 71 | called. Every one who includes the header file will then have | 
| 72 | access to all of the routines in mpiSimulation class. | 
| 73 | */ | 
| 74 |  | 
| 75 | extern mpiSimulation* mpiSim; | 
| 76 |  | 
| 77 | #endif |