in the progress of fixing MPI version of cutoff group
fixed two bugs in MPI version of InitfromFile and one unmatch MPI command in DumpWriter
Change DumpWriter and InitFromFile
More BASS changes to do new rigidBody scheme a copy of WATER.cpp from this morning
BASS changes to add RigidBodies required a change in how the MoleculeStamps are used by divideLabor in mpiSimulation.cpp
replace c++ header stuff with more portable c header stuff Also, mod file fixes and portability changes Some fortran changes will need to be reversed.
cleaned things with gcc -Wall and g++ -Wall
set default force substraction policy to PolicyByMass
user can setup seed in bass file now, if he does not specify any value for seed, oopse will take the value of seconds of system time as seed
fixed some small things with simError.h
more bug fixes....
mpi fixes and debugging mpi read write from file.
MPI buggy, fixed mpiRefresh issue.
finished updating SimSetup to initialize and use the new MPI division of labour, and Molecule class
fixes for local->global atom numbering in MPI
little bug fixes here and there.
bug fixes many bug fixes
Finished globalIndex.
MPI stuff for passing out molecules
working on load balancing
This commit was generated by cvs2svn to compensate for changes in r377, which included commits to RCS files with non-trunk default branches.
New OOPSE Tree
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