| 335 |
|
|
| 336 |
|
|
| 337 |
|
if( simnfo->n_SRI ){ |
| 338 |
+ |
|
| 339 |
+ |
std::cerr << "n_SRI = " << simnfo->n_SRI << "\n"; |
| 340 |
+ |
|
| 341 |
|
Exclude::createArray(simnfo->n_SRI); |
| 342 |
|
the_excludes = new Exclude*[simnfo->n_SRI]; |
| 343 |
+ |
for( int ex=0; ex<simnfo->n_SRI; ex++) the_excludes[ex] = new Exclude(ex); |
| 344 |
|
simnfo->globalExcludes = new int; |
| 345 |
|
simnfo->n_exclude = tot_SRI; |
| 346 |
|
} |
| 358 |
|
// set the arrays into the SimInfo object |
| 359 |
|
|
| 360 |
|
simnfo->atoms = the_atoms; |
| 361 |
+ |
simnfo->molecules = the_molecules; |
| 362 |
|
simnfo->nGlobalExcludes = 0; |
| 363 |
|
simnfo->excludes = the_excludes; |
| 364 |
|
|