8 |
|
objType = OT_RIGIDBODY; |
9 |
|
is_linear = false; |
10 |
|
linear_axis = -1; |
11 |
+ |
momIntTol = 1e-6; |
12 |
|
} |
13 |
|
|
14 |
|
RigidBody::~RigidBody() { |
86 |
|
theF[i] = frc[i]; |
87 |
|
} |
88 |
|
|
89 |
+ |
void RigidBody::setFrc(double theF[3]){ |
90 |
+ |
for (int i = 0; i < 3 ; i++) |
91 |
+ |
frc[i] = theF[i]; |
92 |
+ |
} |
93 |
+ |
|
94 |
|
void RigidBody::addFrc(double theF[3]){ |
95 |
|
for (int i = 0; i < 3 ; i++) |
96 |
|
frc[i] += theF[i]; |
188 |
|
A[2][0] = 2.0 * ( the_q[1] * the_q[3] + the_q[0] * the_q[2] ); |
189 |
|
A[2][1] = 2.0 * ( the_q[2] * the_q[3] - the_q[0] * the_q[1] ); |
190 |
|
A[2][2] = q0Sqr - q1Sqr -q2Sqr +q3Sqr; |
185 |
– |
|
191 |
|
} |
192 |
|
|
193 |
|
void RigidBody::getA( double the_A[3][3] ){ |
223 |
|
void RigidBody::getTrq(double theT[3]){ |
224 |
|
for (int i = 0; i < 3 ; i++) |
225 |
|
theT[i] = trq[i]; |
226 |
+ |
} |
227 |
+ |
|
228 |
+ |
void RigidBody::setTrq(double theT[3]){ |
229 |
+ |
for (int i = 0; i < 3 ; i++) |
230 |
+ |
trq[i] = theT[i]; |
231 |
|
} |
232 |
|
|
233 |
|
void RigidBody::addTrq(double theT[3]){ |
268 |
|
r[0] = (A[0][0] * rb[0]) + (A[1][0] * rb[1]) + (A[2][0] * rb[2]); |
269 |
|
r[1] = (A[0][1] * rb[0]) + (A[1][1] * rb[1]) + (A[2][1] * rb[2]); |
270 |
|
r[2] = (A[0][2] * rb[0]) + (A[1][2] * rb[1]) + (A[2][2] * rb[2]); |
271 |
+ |
|
272 |
+ |
} |
273 |
+ |
|
274 |
+ |
double RigidBody::getZangle( ){ |
275 |
+ |
return zAngle; |
276 |
+ |
} |
277 |
+ |
|
278 |
+ |
void RigidBody::setZangle( double zAng ){ |
279 |
+ |
zAngle = zAng; |
280 |
+ |
} |
281 |
|
|
282 |
+ |
void RigidBody::addZangle( double zAng ){ |
283 |
+ |
zAngle += zAng; |
284 |
|
} |
285 |
|
|
286 |
|
void RigidBody::calcRefCoords( ) { |
654 |
|
|
655 |
|
//for(atomIter = myAtoms.begin(); atomIter != myAtoms.end(); ++atomIter) |
656 |
|
// (*atomIter)->accept(v); |
657 |
< |
} |
657 |
> |
} |
658 |
> |
void RigidBody::getAtomRefCoor(double pos[3], int index){ |
659 |
> |
vec3 ref; |
660 |
> |
|
661 |
> |
ref = refCoords[index]; |
662 |
> |
pos[0] = ref[0]; |
663 |
> |
pos[1] = ref[1]; |
664 |
> |
pos[2] = ref[2]; |
665 |
> |
|
666 |
> |
} |
667 |
> |
|
668 |
> |
|
669 |
> |
void RigidBody::getAtomPos(double theP[3], int index){ |
670 |
> |
vec3 ref; |
671 |
> |
|
672 |
> |
if (index >= myAtoms.size()) |
673 |
> |
cerr << index << " is an invalid index, current rigid body contains " << myAtoms.size() << "atoms" << endl; |
674 |
> |
|
675 |
> |
ref = refCoords[index]; |
676 |
> |
body2Lab(ref.vec); |
677 |
> |
|
678 |
> |
theP[0] = pos[0] + ref[0]; |
679 |
> |
theP[1] = pos[1] + ref[1]; |
680 |
> |
theP[2] = pos[2] + ref[2]; |
681 |
> |
} |
682 |
> |
|
683 |
> |
|
684 |
> |
void RigidBody::getAtomVel(double theV[3], int index){ |
685 |
> |
vec3 ref; |
686 |
> |
double velRot[3]; |
687 |
> |
double skewMat[3][3]; |
688 |
> |
double aSkewMat[3][3]; |
689 |
> |
double aSkewTransMat[3][3]; |
690 |
> |
|
691 |
> |
//velRot = $(A\cdot skew(I^{-1}j))^{T}refCoor$ |
692 |
> |
|
693 |
> |
if (index >= myAtoms.size()) |
694 |
> |
cerr << index << " is an invalid index, current rigid body contains " << myAtoms.size() << "atoms" << endl; |
695 |
> |
|
696 |
> |
ref = refCoords[index]; |
697 |
> |
|
698 |
> |
skewMat[0][0] =0; |
699 |
> |
skewMat[0][1] = ji[2] /I[2][2]; |
700 |
> |
skewMat[0][2] = -ji[1] /I[1][1]; |
701 |
> |
|
702 |
> |
skewMat[1][0] = -ji[2] /I[2][2]; |
703 |
> |
skewMat[1][1] = 0; |
704 |
> |
skewMat[1][2] = ji[0]/I[0][0]; |
705 |
> |
|
706 |
> |
skewMat[2][0] =ji[1] /I[1][1]; |
707 |
> |
skewMat[2][1] = -ji[0]/I[0][0]; |
708 |
> |
skewMat[2][2] = 0; |
709 |
> |
|
710 |
> |
matMul3(A, skewMat, aSkewMat); |
711 |
> |
|
712 |
> |
transposeMat3(aSkewMat, aSkewTransMat); |
713 |
> |
|
714 |
> |
matVecMul3(aSkewTransMat, ref.vec, velRot); |
715 |
> |
theV[0] = vel[0] + velRot[0]; |
716 |
> |
theV[1] = vel[1] + velRot[1]; |
717 |
> |
theV[2] = vel[2] + velRot[2]; |
718 |
> |
} |
719 |
> |
|
720 |
> |
|