roll in progress
Fixed a bug in NPTf (vScale was declared in the cpp file in addition to the declaration in Integrator.hpp file)
new rattle algorithm is working
fixed two bugs in MPI version of InitfromFile and one unmatch MPI command in DumpWriter
Changes for RigidBody dynamics (Somewhat extensive)
moved the velocity scale matrix calculation outside of the atom loop in the NPT family of integrators.
add chi and eta to the comment line of dump file.
replace c++ header stuff with more portable c header stuff Also, mod file fixes and portability changes Some fortran changes will need to be reversed.
Converted NPTf to work with the NPT base class. Removed NPTfm and NPTim from cvs
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