| 15 |
|
int nTorsions; // .. . . .. . . torsions . . .. . . |
| 16 |
|
int nOriented; // .. . . . .. . oriented atoms . . . |
| 17 |
|
int nExcludes; // . . .. . . . .exclude pairs.. . . . |
| 18 |
< |
|
| 18 |
> |
|
| 19 |
|
Atom** myAtoms; // the array of atoms |
| 20 |
|
Exclude** myExcludes;// the array of Excluded pairs |
| 21 |
|
Bond** myBonds; // arrays of all the short range interactions |
| 57 |
|
double getPotential( void ); |
| 58 |
|
|
| 59 |
|
void printMe( void ); |
| 60 |
– |
|
| 60 |
|
|
| 61 |
+ |
void getCOM( double COM[3] ); |
| 62 |
+ |
void moveCOM(double delta[3]); |
| 63 |
+ |
|
| 64 |
|
private: |
| 65 |
|
|
| 66 |
|
int stampID; // the ID in the BASS component stamp array |