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root/group/trunk/OOPSE/libmdtools/Make.dep
Revision: 1199
Committed: Thu May 27 15:21:20 2004 UTC (21 years, 5 months ago) by gezelter
File size: 49839 byte(s)
Log Message: 
Fixed off-by-one error in groupStartRow and groupStartCol

File Contents

# User Rev Content
1 gezelter 747 # DO NOT DELETE THIS LINE - used by make depend
2 gezelter 1097 obj/mpiForceField$(O) : ./mpiForceField.c
3 tim 1119 obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
4 gezelter 1097 obj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
5     obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
6 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
7 gezelter 1097 obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
8 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
9 gezelter 1097 obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
10 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
11     ./AbstractClasses.hpp ../libBASS/simError.h
12 gezelter 1097 obj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
13 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
14 gezelter 1097 obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
15 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
16     ./AbstractClasses.hpp
17 gezelter 1097 obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
18 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
19     ../libBASS/simError.h ./MatVec3.h
20 gezelter 1097 obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
21 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
22     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
23     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
24     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
25 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
26 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
27 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
28     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
29     ./randomSPRNG.hpp ../libBASS/simError.h
30 gezelter 1097 obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
31 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
32     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
33     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
34     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
35 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
36 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
37 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
38     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
39     ./randomSPRNG.hpp ../libBASS/simError.h
40 tim 1119 obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
41     obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
42     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
43     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
44 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
45     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
46     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
47 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
48 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
49     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
50     ./randomSPRNG.hpp ../libBASS/simError.h
51 tim 1119 obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
52     ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
53 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
54     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
55     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
56 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
57 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
58 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
59     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
60     ../libBASS/simError.h ./fortranWrappers.hpp
61 gezelter 1097 obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
62 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
63     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
64     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
65     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
66 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
67 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
68 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
69     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
70     ../libBASS/simError.h ./fortranWrappers.hpp
71 gezelter 1097 obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
72 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
73     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
74     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
75     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
76 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
77 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
78 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
79     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
80     ../libBASS/simError.h ./fortranWrappers.hpp
81 tim 1119 obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
82     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
83     ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
84     ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
85 gezelter 1097 obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
86 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
87     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
88     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
89     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
90 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
91 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
92 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
93     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
94     ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
95     ./MatVec3.h
96 gezelter 1097 obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
97     ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
98     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
99     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
100 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
101     ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
102     ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
103     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
104     ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
105 tim 1158 ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
106 gezelter 1199 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
107     ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
108     ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
109     ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
110     ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
111 tim 1158 ./MinimizerParameterSet.hpp
112 gezelter 1097 obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
113 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
114     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
115     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
116     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
117 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
118 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
119 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
120     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
121     ./randomSPRNG.hpp ../libBASS/simError.h
122 tim 1119 obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
123     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
124     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
125     ../libBASS/AtomStamp.hpp ../libBASS/simError.h
126     obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
127     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
128 gezelter 1097 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
129 tim 1119 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
130     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
131 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
132 tim 1158 ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
133 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
134     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
135     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
136 tim 1158 ../libBASS/simError.h
137 gezelter 1097 obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
138 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
139     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
140     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
141 gezelter 1097 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
142     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
143 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
144 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
145     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
146     ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
147     ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
148 gezelter 1097 obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
149 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
150     ./DirectionalAtom.hpp ./AbstractClasses.hpp
151 gezelter 1097 obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
152 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
153 gezelter 1097 obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
154 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
155     ./AbstractClasses.hpp
156 gezelter 1097 obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
157 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
158     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
159     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
160     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
161 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
162 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
163 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
164     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
165     ../libBASS/simError.h ./fortranWrappers.hpp
166 tim 1119 obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
167     obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
168     ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
169     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
170 gezelter 1097 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
171     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
172     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
173     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
174 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
175 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
176     ./fSimulation.h ./fForceField.h
177 gezelter 1097 obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
178 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
179     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
180     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
181     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
182 gezelter 1097 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
183 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
184 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
185     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
186     ./fortranWrappers.hpp
187 tim 1119 obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
188     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
189     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
190     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
191     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
192 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
193 tim 1158 ./CutoffGroup.hpp ../libBASS/simError.h
194 tim 1119 obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
195     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
196     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
197 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
198     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
199     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
200 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
201 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
202     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
203     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
204 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
205 tim 1119 obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
206     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
207     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
208     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
209     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
210 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
211     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
212 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
213     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
214     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
215     ./ZConsWriter.hpp ../libBASS/simError.h
216 gezelter 1097 obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
217 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
218     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
219 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
220     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
221     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
222 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
223 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
224     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
225     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
226 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
227 tim 1119 obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
228     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
229     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
230     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
231     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
232 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
233     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
234 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
235     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
236     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
237     ./ZConsWriter.hpp ../libBASS/simError.h
238 gezelter 1097 obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
239     obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
240 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
241     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
242     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
243     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
244 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
245 tim 1158 ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
246 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
247     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
248     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
249 tim 1158 ../libBASS/simError.h
250 gezelter 1097 obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
251     ../libBASS/simError.h
252     obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
253     obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
254     obj/mpiSimulation$(O) : ./mpiSimulation.cpp
255     obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
256     obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
257 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
258     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
259 gezelter 1097 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
260     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
261 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
262 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
263     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
264 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
265     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
266     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
267     ./MinimizerParameterSet.hpp
268 tim 1119 obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
269     ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
270     ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
271 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
272     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
273 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
274 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
275     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
276 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
277     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
278     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
279     ./MinimizerParameterSet.hpp ./Utility.hpp
280 tim 1119 obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
281     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
282     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
283     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
284     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
285 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
286 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
287     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
288 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
289     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
290     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
291     ./MinimizerParameterSet.hpp ./Utility.hpp
292 gezelter 1097 obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
293 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
294     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
295     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
296 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
297 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
298 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
299     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
300 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
301     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
302     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
303     ./MinimizerParameterSet.hpp ./Utility.hpp
304 gezelter 1097 obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
305 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
306     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
307     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
308     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
309 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
310 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
311     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
312 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
313     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
314     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
315     ../libBASS/simError.h
316 tim 1119 obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
317     ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
318 gezelter 1154 ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
319     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
320 tim 1119 obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
321 gezelter 1154 ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
322     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
323     ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
324 tim 1119 obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
325     ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
326     ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
327     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
328     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
329 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
330 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
331     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
332 gezelter 1199 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
333 tim 1119 obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
334     ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
335     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
336     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
337     obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
338     ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
339     ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
340 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
341     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
342 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
343 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
344     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
345 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
346     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
347     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp
348     obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
349     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
350     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
351     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
352     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
353     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
354     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
355     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
356     ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
357 gezelter 1097 MPIobj/mpiForceField$(O) : ./mpiForceField.c
358 tim 1119 MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
359 gezelter 1097 MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
360     MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
361 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
362 gezelter 1097 MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
363 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
364 gezelter 1097 MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
365 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
366     ./AbstractClasses.hpp ../libBASS/simError.h
367 gezelter 1097 MPIobj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
368 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
369 gezelter 1097 MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
370 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
371     ./AbstractClasses.hpp
372 gezelter 1097 MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
373 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
374     ../libBASS/simError.h ./MatVec3.h
375 gezelter 1097 MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
376 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
377     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
378     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
379     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
380 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
381 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
382 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
383     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
384     ./randomSPRNG.hpp ../libBASS/simError.h
385 gezelter 1097 MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
386 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
387     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
388     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
389     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
390 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
391 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
392 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
393     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
394     ./randomSPRNG.hpp ../libBASS/simError.h
395 tim 1119 MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
396     MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
397     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
398     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
399 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
400     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
401     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
402 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
403 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
404     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
405     ./randomSPRNG.hpp ../libBASS/simError.h
406 tim 1119 MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
407     ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
408 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
409     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
410     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
411 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
412 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
413 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
414     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
415     ../libBASS/simError.h ./fortranWrappers.hpp
416 gezelter 1097 MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
417 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
418     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
419     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
420     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
421 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
422 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
423 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
424     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
425     ../libBASS/simError.h ./fortranWrappers.hpp
426 gezelter 1097 MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
427 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
428     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
429     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
430     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
431 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
432 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
433 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
434     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
435     ../libBASS/simError.h ./fortranWrappers.hpp
436 tim 1119 MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
437     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
438     ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
439     ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
440 gezelter 1097 MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
441 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
442     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
443     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
444     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
445 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
446 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
447 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
448     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
449     ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
450     ./MatVec3.h
451 gezelter 1097 MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
452     ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
453     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
454     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
455 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
456     ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
457     ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
458     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
459     ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
460 tim 1158 ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
461 gezelter 1199 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
462     ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
463     ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
464     ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
465     ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
466 tim 1158 ./MinimizerParameterSet.hpp
467 gezelter 1097 MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
468 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
469     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
470     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
471     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
472 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
473 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
474 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
475     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
476     ./randomSPRNG.hpp ../libBASS/simError.h
477 tim 1119 MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
478     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
479     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
480     ../libBASS/AtomStamp.hpp ../libBASS/simError.h
481     MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
482     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
483 gezelter 1097 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
484 tim 1119 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
485     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
486 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
487 tim 1158 ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
488 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
489     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
490     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
491 tim 1158 ../libBASS/simError.h
492 gezelter 1097 MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
493 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
494     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
495     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
496 gezelter 1097 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
497     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
498 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
499 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
500     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
501     ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
502     ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
503 gezelter 1097 MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
504 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
505     ./DirectionalAtom.hpp ./AbstractClasses.hpp
506 gezelter 1097 MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
507 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
508 gezelter 1097 MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
509 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
510     ./AbstractClasses.hpp
511 gezelter 1097 MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
512 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
513     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
514     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
515     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
516 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
517 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
518 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
519     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
520     ../libBASS/simError.h ./fortranWrappers.hpp
521 tim 1119 MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
522     MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
523     ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
524     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
525 gezelter 1097 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
526     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
527     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
528     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
529 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
530 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
531     ./fSimulation.h ./fForceField.h
532 gezelter 1097 MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
533 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
534     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
535     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
536     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
537 gezelter 1097 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
538 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
539 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
540     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
541     ./fortranWrappers.hpp
542 tim 1119 MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
543     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
544     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
545     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
546     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
547 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
548 tim 1158 ./CutoffGroup.hpp ../libBASS/simError.h
549 tim 1119 MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
550     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
551     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
552 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
553     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
554     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
555 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
556 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
557     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
558     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
559 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
560 tim 1119 MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
561     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
562     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
563     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
564     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
565 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
566     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
567 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
568     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
569     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
570     ./ZConsWriter.hpp ../libBASS/simError.h
571 gezelter 1097 MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
572 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
573     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
574 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
575     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
576     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
577 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
578 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
579     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
580     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
581 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
582 tim 1119 MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
583     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
584     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
585     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
586     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
587 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
588     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
589 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
590     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
591     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
592     ./ZConsWriter.hpp ../libBASS/simError.h
593 gezelter 1097 MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
594     MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
595 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
596     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
597     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
598     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
599 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
600 tim 1158 ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
601 gezelter 1199 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
602     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
603     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
604 tim 1158 ../libBASS/simError.h
605 gezelter 1097 MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
606     ../libBASS/simError.h
607     MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
608     MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
609     MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
610     MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
611     MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
612 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
613     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
614 gezelter 1097 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
615     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
616 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
617 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
618     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
619 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
620     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
621     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
622     ./MinimizerParameterSet.hpp
623 tim 1119 MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
624     ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
625     ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
626 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
627     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
628 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
629 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
630     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
631 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
632     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
633     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
634     ./MinimizerParameterSet.hpp ./Utility.hpp
635 tim 1119 MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
636     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
637     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
638     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
639     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
640 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
641 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
642     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
643 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
644     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
645     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
646     ./MinimizerParameterSet.hpp ./Utility.hpp
647 gezelter 1097 MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
648 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
649     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
650     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
651 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
652 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
653 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
654     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
655 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
656     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
657     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
658     ./MinimizerParameterSet.hpp ./Utility.hpp
659 gezelter 1097 MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
660 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
661     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
662     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
663     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
664 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
665 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
666     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
667 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
668     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
669     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
670     ../libBASS/simError.h
671 tim 1119 MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
672     ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
673 gezelter 1154 ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
674     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
675 tim 1119 MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
676 gezelter 1154 ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
677     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
678     ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
679 tim 1119 MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
680     ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
681     ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
682     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
683     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
684 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
685 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
686     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
687 gezelter 1199 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
688 tim 1119 MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
689     ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
690     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
691     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
692     MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
693     ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
694     ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
695 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
696     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
697 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
698 tim 1158 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
699     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
700 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
701     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
702     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp
703     MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
704     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
705     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
706     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
707     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
708     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
709     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
710     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
711     ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h