| 84 | 
  | 
  char *parseErr; | 
| 85 | 
  | 
  int procIndex; | 
| 86 | 
  | 
  double boxMat[9]; | 
| 87 | 
< | 
   | 
| 87 | 
> | 
  double theBoxMat3[3][3]; | 
| 88 | 
  | 
 | 
| 89 | 
  | 
  simnfo = the_simnfo; | 
| 90 | 
  | 
 | 
| 130 | 
  | 
    simError(); | 
| 131 | 
  | 
  } | 
| 132 | 
  | 
 | 
| 133 | 
< | 
  simnfo->setBoxM( boxMat ); | 
| 133 | 
> | 
  for(i=0;i<3;i++) | 
| 134 | 
> | 
    for(j=0;j<3;j++) theBoxMat3[i][j] = boxMat[3*j+i]; | 
| 135 | 
  | 
 | 
| 136 | 
+ | 
  simnfo->setBoxM( theBoxMat3 ); | 
| 137 | 
  | 
 | 
| 138 | 
+ | 
 | 
| 139 | 
  | 
  for( i=0; i < n_atoms; i++){ | 
| 140 | 
  | 
     | 
| 141 | 
  | 
    eof_test = fgets(read_buffer, sizeof(read_buffer), c_in_file); | 
| 304 | 
  | 
      | 
| 305 | 
  | 
 // last  thing last, enable  fatalities. | 
| 306 | 
  | 
  painCave.isEventLoop = 0; | 
| 307 | 
< | 
  simnfo->setBoxM( boxMat ); | 
| 307 | 
> | 
 | 
| 308 | 
> | 
  for(i=0;i<3;i++) | 
| 309 | 
> | 
    for(j=0;j<3;j++) theBoxMat3[i][j] = boxMat[3*j+i]; | 
| 310 | 
> | 
 | 
| 311 | 
> | 
  simnfo->setBoxM( theBoxMat3 ); | 
| 312 | 
  | 
 | 
| 313 | 
  | 
    | 
| 314 | 
  | 
#endif |