| 5 |
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#define STR_DEFINE(t, s) t = MK_STR(s) |
| 6 |
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|
| 7 |
|
|
| 8 |
< |
#include <cstdio> |
| 9 |
< |
#include <cstdlib> |
| 8 |
> |
#include <stdio.h> |
| 9 |
> |
#include <stdlib.h> |
| 10 |
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|
| 11 |
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#include "Atom.hpp" |
| 12 |
|
#include "SimInfo.hpp" |
| 96 |
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|
| 97 |
|
}; |
| 98 |
|
|
| 99 |
– |
class TraPPEFF : public ForceFields{ |
| 99 |
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|
| 100 |
+ |
class DUFF : public ForceFields{ |
| 101 |
+ |
|
| 102 |
|
public: |
| 103 |
< |
TraPPEFF(); |
| 104 |
< |
virtual ~TraPPEFF(); |
| 103 |
> |
DUFF(); |
| 104 |
> |
virtual ~DUFF(); |
| 105 |
|
|
| 106 |
< |
void readParams(){} |
| 107 |
< |
void cleanMe( void ){} |
| 106 |
> |
void readParams(); |
| 107 |
> |
void cleanMe( void ); |
| 108 |
|
|
| 109 |
< |
void initializeAtoms( int nAtoms, Atom** atomArray ) {} |
| 109 |
> |
void initializeAtoms( int nAtoms, Atom** atomArray ); |
| 110 |
|
void initializeBonds( int nBonds, Bond** bondArray, |
| 111 |
< |
bond_pair* the_bonds ) {} |
| 111 |
> |
bond_pair* the_bonds ); |
| 112 |
|
void initializeBends( int nBends, Bend** bendArray, |
| 113 |
< |
bend_set* the_bends ) {} |
| 113 |
> |
bend_set* the_bends ); |
| 114 |
|
void initializeTorsions( int nTorsions, Torsion** torsionArray, |
| 115 |
< |
torsion_set* the_torsions ) {} |
| 115 |
< |
|
| 116 |
< |
}; |
| 115 |
> |
torsion_set* the_torsions ); |
| 116 |
|
|
| 117 |
+ |
void initForceField( int ljMixRule ); |
| 118 |
|
|
| 119 |
< |
class DipoleTestFF : public ForceFields{ |
| 120 |
< |
|
| 121 |
< |
public: |
| 122 |
< |
DipoleTestFF(); |
| 123 |
< |
virtual ~DipoleTestFF(); |
| 119 |
> |
private: |
| 120 |
|
|
| 121 |
< |
void readParams(){} |
| 126 |
< |
void cleanMe( void ){} |
| 127 |
< |
|
| 128 |
< |
void initializeAtoms( int nAtoms, Atom** atomArray ) {} |
| 129 |
< |
void initializeBonds( int nBonds, Bond** bondArray, |
| 130 |
< |
bond_pair* the_bonds ) {} |
| 131 |
< |
void initializeBends( int nBends, Bend** bendArray, |
| 132 |
< |
bend_set* the_bends ) {} |
| 133 |
< |
void initializeTorsions( int nTorsions, Torsion** torsionArray, |
| 134 |
< |
torsion_set* the_torsions ) {} |
| 121 |
> |
void fastForward( char* stopText, char* searchOwner ); |
| 122 |
|
}; |
| 123 |
|
|
| 124 |
< |
class TraPPE_ExFF : public ForceFields{ |
| 124 |
> |
class LJFF : public ForceFields{ |
| 125 |
|
|
| 126 |
|
public: |
| 127 |
< |
TraPPE_ExFF(); |
| 128 |
< |
virtual ~TraPPE_ExFF(); |
| 127 |
> |
LJFF(); |
| 128 |
> |
virtual ~LJFF(); |
| 129 |
> |
|
| 130 |
|
|
| 131 |
|
void readParams(); |
| 132 |
|
void cleanMe( void ); |
| 139 |
|
void initializeTorsions( int nTorsions, Torsion** torsionArray, |
| 140 |
|
torsion_set* the_torsions ); |
| 141 |
|
|
| 142 |
+ |
void initForceField( int ljMixRule ); |
| 143 |
+ |
|
| 144 |
|
private: |
| 145 |
< |
|
| 145 |
> |
|
| 146 |
|
void fastForward( char* stopText, char* searchOwner ); |
| 147 |
+ |
|
| 148 |
|
}; |
| 149 |
|
|
| 150 |
< |
class LJ_FF : public ForceFields{ |
| 150 |
> |
class EAM_FF : public ForceFields{ |
| 151 |
|
|
| 152 |
|
public: |
| 153 |
< |
LJ_FF(); |
| 154 |
< |
virtual ~LJ_FF(); |
| 153 |
> |
EAM_FF(); |
| 154 |
> |
virtual ~EAM_FF(); |
| 155 |
|
|
| 156 |
|
|
| 157 |
|
void readParams(); |
| 164 |
|
bend_set* the_bends ); |
| 165 |
|
void initializeTorsions( int nTorsions, Torsion** torsionArray, |
| 166 |
|
torsion_set* the_torsions ); |
| 167 |
+ |
|
| 168 |
+ |
void initForceField( int ljMixRule ); |
| 169 |
+ |
|
| 170 |
+ |
void calcRcut( void ); |
| 171 |
|
private: |
| 172 |
|
|
| 173 |
|
void fastForward( char* stopText, char* searchOwner ); |
| 174 |
< |
|
| 174 |
> |
|
| 175 |
> |
double eamRcut; |
| 176 |
|
}; |
| 177 |
|
|
| 178 |
|
#endif |