| 1 | tim | 987 | #ifndef _ABSTRACT_CLASSES_H_ | 
| 2 |  |  | #define _ABSTRACT_CLASSES_H_ | 
| 3 |  |  |  | 
| 4 |  |  | #include <string> | 
| 5 |  |  | #include "Atom.hpp" | 
| 6 |  |  | #ifdef IS_MPI | 
| 7 |  |  |  | 
| 8 |  |  | #include "mpi.h" | 
| 9 |  |  | #endif | 
| 10 |  |  |  | 
| 11 |  |  | using namespace std; | 
| 12 |  |  |  | 
| 13 |  |  | class Constraint{ | 
| 14 |  |  | public: | 
| 15 |  |  | Constraint(){ | 
| 16 |  |  | } | 
| 17 |  |  | ~Constraint(){ | 
| 18 |  |  | } | 
| 19 |  |  |  | 
| 20 |  |  | int get_a(){ | 
| 21 |  |  | return a; | 
| 22 |  |  | } | 
| 23 |  |  | void set_a(int index){ | 
| 24 |  |  | a = index; | 
| 25 |  |  | } | 
| 26 |  |  | int get_b(){ | 
| 27 |  |  | return b; | 
| 28 |  |  | } | 
| 29 |  |  | void set_b(int index){ | 
| 30 |  |  | b = index; | 
| 31 |  |  | } | 
| 32 |  |  | double get_dsqr(){ | 
| 33 |  |  | return dsqr; | 
| 34 |  |  | } | 
| 35 |  |  | void set_dsqr(double ds){ | 
| 36 |  |  | dsqr = ds; | 
| 37 |  |  | } | 
| 38 |  |  |  | 
| 39 |  |  | private: | 
| 40 |  |  | int a; /* index of constrained atom a */ | 
| 41 |  |  | int b; /* index of constrained atom b */ | 
| 42 |  |  | double dsqr; /* the square of the constraint distance */ | 
| 43 |  |  | }; | 
| 44 |  |  |  | 
| 45 |  |  | class SRI{ | 
| 46 |  |  | public: | 
| 47 |  |  | SRI(){ | 
| 48 |  |  | c_potential_E = 0.0; | 
| 49 |  |  | } | 
| 50 |  |  | virtual ~SRI(){ | 
| 51 |  |  | } | 
| 52 |  |  |  | 
| 53 |  |  | virtual void calc_forces() = 0; | 
| 54 |  |  |  | 
| 55 |  |  | double get_potential(){ | 
| 56 |  |  | return c_potential_E; | 
| 57 |  |  | } | 
| 58 |  |  | virtual int is_constrained() = 0; | 
| 59 |  |  | virtual Constraint* get_constraint() = 0; | 
| 60 |  |  | virtual void constrain(double bond_distance) = 0; | 
| 61 |  |  |  | 
| 62 |  |  | virtual void printMe(void) = 0; | 
| 63 |  |  |  | 
| 64 |  |  | protected: | 
| 65 |  |  | double c_potential_E; | 
| 66 |  |  | }; | 
| 67 |  |  |  | 
| 68 |  |  |  | 
| 69 |  |  | class BaseIntegrator{ | 
| 70 |  |  | public: | 
| 71 |  |  | BaseIntegrator(){ | 
| 72 |  |  | } | 
| 73 |  |  | virtual ~BaseIntegrator(){ | 
| 74 |  |  | } | 
| 75 |  |  |  | 
| 76 |  |  | virtual void integrate(void) = 0; | 
| 77 |  |  | virtual double getConservedQuantity(void) = 0; | 
| 78 |  |  | virtual string getAdditionalParameters(void) = 0; | 
| 79 |  |  | }; | 
| 80 |  |  | #endif |