| 1 |
mmeineke |
377 |
#ifndef __MOLECULESTAMP_H__ |
| 2 |
|
|
#define __MOLECULESTAMP_H__ |
| 3 |
|
|
|
| 4 |
|
|
#include "AtomStamp.hpp" |
| 5 |
|
|
#include "BondStamp.hpp" |
| 6 |
|
|
#include "BendStamp.hpp" |
| 7 |
|
|
#include "TorsionStamp.hpp" |
| 8 |
|
|
#include "LinkedAssign.hpp" |
| 9 |
|
|
|
| 10 |
|
|
class MoleculeStamp{ |
| 11 |
|
|
|
| 12 |
|
|
public: |
| 13 |
|
|
MoleculeStamp(); |
| 14 |
|
|
~MoleculeStamp(); |
| 15 |
|
|
|
| 16 |
|
|
char* assignString( char* lhs, char* rhs ); |
| 17 |
|
|
char* assignDouble( char* lhs, double rhs ); |
| 18 |
|
|
char* assignInt( char* lhs, int rhs ); |
| 19 |
|
|
char* checkMe( void ); |
| 20 |
|
|
|
| 21 |
|
|
char* addAtom( AtomStamp* the_atom, int atomIndex ); |
| 22 |
|
|
char* addBond( BondStamp* the_bond, int bondIndex ); |
| 23 |
|
|
char* addBend( BendStamp* the_bend, int bendIndex ); |
| 24 |
|
|
char* addTorsion( TorsionStamp* the_torsion, int torsionIndex ); |
| 25 |
|
|
|
| 26 |
|
|
char* getID( void ) { return name; } |
| 27 |
|
|
int getNAtoms( void ) { return n_atoms; } |
| 28 |
|
|
int getNBonds( void ) { return n_bonds; } |
| 29 |
|
|
int getNBends( void ) { return n_bends; } |
| 30 |
|
|
int getNTorsions( void ) { return n_torsions; } |
| 31 |
|
|
|
| 32 |
|
|
AtomStamp* getAtom( int index ) { return atoms[index]; } |
| 33 |
|
|
BondStamp* getBond( int index ) { return bonds[index]; } |
| 34 |
|
|
BendStamp* getBend( int index ) { return bends[index]; } |
| 35 |
|
|
TorsionStamp* getTorsion( int index ) { return torsions[index]; } |
| 36 |
|
|
|
| 37 |
|
|
static char errMsg[500]; |
| 38 |
|
|
private: |
| 39 |
|
|
|
| 40 |
|
|
|
| 41 |
|
|
char name[100]; |
| 42 |
|
|
int n_atoms; |
| 43 |
|
|
int n_bonds; |
| 44 |
|
|
int n_bends; |
| 45 |
|
|
int n_torsions; |
| 46 |
|
|
|
| 47 |
|
|
int have_name, have_atoms, have_bonds, have_bends, have_torsions; |
| 48 |
|
|
|
| 49 |
|
|
AtomStamp** atoms; |
| 50 |
|
|
BondStamp** bonds; |
| 51 |
|
|
BendStamp** bends; |
| 52 |
|
|
TorsionStamp** torsions; |
| 53 |
|
|
|
| 54 |
|
|
LinkedAssign* unhandled; // the unhandled assignments |
| 55 |
|
|
short int have_extras; |
| 56 |
|
|
}; |
| 57 |
|
|
|
| 58 |
|
|
#endif |