| 14 |
|
n_bends = 0; |
| 15 |
|
n_torsions = 0; |
| 16 |
|
n_rigidbodies = 0; |
| 17 |
+ |
n_integrable = 0; |
| 18 |
|
|
| 19 |
|
unhandled = NULL; |
| 20 |
|
atoms = NULL; |
| 247 |
|
char* MoleculeStamp::addAtom( AtomStamp* the_atom, int atomIndex ){ |
| 248 |
|
|
| 249 |
|
if( have_atoms && atomIndex < n_atoms ) atoms[atomIndex] = the_atom; |
| 250 |
< |
else{ |
| 250 |
> |
else { |
| 251 |
|
if( have_atoms ){ |
| 252 |
|
sprintf( errMsg, "MoleculeStamp error, %d out of nAtoms range", |
| 253 |
|
atomIndex ); |
| 265 |
|
|
| 266 |
|
if( have_rigidbodies && rigidBodyIndex < n_rigidbodies ) |
| 267 |
|
rigidBodies[rigidBodyIndex] = the_rigidbody; |
| 268 |
< |
else{ |
| 268 |
> |
else { |
| 269 |
|
if( have_rigidbodies ){ |
| 270 |
|
sprintf( errMsg, "MoleculeStamp error, %d out of nRigidBodies range", |
| 271 |
|
rigidBodyIndex ); |
| 366 |
|
return strdup( errMsg ); |
| 367 |
|
} |
| 368 |
|
|
| 369 |
+ |
|
| 370 |
+ |
n_integrable = n_atoms; |
| 371 |
+ |
for (i = 0; i < n_rigidbodies; i++) |
| 372 |
+ |
n_integrable -= rigidBodies[i]->getNMembers(); |
| 373 |
+ |
|
| 374 |
+ |
if (n_integrable <= 0 || n_integrable > n_atoms) { |
| 375 |
+ |
sprintf( errMsg, |
| 376 |
+ |
"MoleculeStamp error. n_integrable is either <= 0 or" |
| 377 |
+ |
" greater than n_atoms in molecule \"%s\".\n", name ); |
| 378 |
+ |
return strdup( errMsg ); |
| 379 |
+ |
} |
| 380 |
+ |
|
| 381 |
|
return NULL; |
| 382 |
|
} |