| 4 |
|
|
| 5 |
|
#include "MakeStamps.hpp" |
| 6 |
|
#include "MoleculeStamp.hpp" |
| 7 |
+ |
#include "RigidBodyStamp.hpp" |
| 8 |
|
#include "simError.h" |
| 9 |
|
#ifdef IS_MPI |
| 10 |
|
#include "mpiBASS.h" |
| 223 |
|
return 1; |
| 224 |
|
} |
| 225 |
|
|
| 225 |
– |
int MakeStamps::rigidBodyPosition( event* the_event ){ |
| 226 |
– |
|
| 227 |
– |
current_rigidbody->setPosition( the_event->evt.pos.x, |
| 228 |
– |
the_event->evt.pos.y, |
| 229 |
– |
the_event->evt.pos.z ); |
| 230 |
– |
return 1; |
| 231 |
– |
} |
| 232 |
– |
|
| 233 |
– |
|
| 234 |
– |
int MakeStamps::rigidBodyOrientation( event* the_event ){ |
| 235 |
– |
|
| 236 |
– |
current_rigidbody->setOrientation( the_event->evt.ornt.x, |
| 237 |
– |
the_event->evt.ornt.y, |
| 238 |
– |
the_event->evt.ornt.z ); |
| 239 |
– |
return 1; |
| 240 |
– |
} |
| 241 |
– |
|
| 226 |
|
int MakeStamps::rigidBodyAssign( event* the_event ){ |
| 227 |
|
|
| 228 |
|
switch( the_event->evt.asmt.asmt_type ){ |
| 260 |
|
return 0; |
| 261 |
|
} |
| 262 |
|
|
| 263 |
+ |
int MakeStamps::rigidBodyMembers( event* the_event ){ |
| 264 |
+ |
|
| 265 |
+ |
int i; |
| 266 |
+ |
|
| 267 |
+ |
if( the_event->evt.mbrs.nMembers > 0 ){ |
| 268 |
+ |
|
| 269 |
+ |
for (i = 0; i < the_event->evt.mbrs.nMembers; i++) { |
| 270 |
+ |
current_rigidbody->addMember( the_event->evt.mbrs.memberList[i]); |
| 271 |
+ |
} |
| 272 |
+ |
|
| 273 |
+ |
return 1; |
| 274 |
+ |
|
| 275 |
+ |
} else { |
| 276 |
+ |
the_event->err_msg = strdup( "MakeStamp error. No members in memberList " |
| 277 |
+ |
" for this rigidBody."); |
| 278 |
+ |
return 0; |
| 279 |
+ |
|
| 280 |
+ |
} |
| 281 |
+ |
} |
| 282 |
+ |
|
| 283 |
|
int MakeStamps::rigidBodyEnd( event* the_event ){ |
| 284 |
|
|
| 285 |
|
the_event->err_msg = current_rigidbody->checkMe(); |
| 294 |
|
|
| 295 |
|
the_event->err_msg = current_mol->addAtom( current_atom, |
| 296 |
|
the_event->evt.blk_index ); |
| 297 |
+ |
|
| 298 |
|
if( the_event->err_msg != NULL ) return 0; |
| 299 |
|
return 1; |
| 300 |
|
} |
| 310 |
|
|
| 311 |
|
int MakeStamps::atomOrientation( event* the_event ){ |
| 312 |
|
|
| 313 |
< |
current_atom->setOrientation( the_event->evt.ornt.x, |
| 314 |
< |
the_event->evt.ornt.y, |
| 315 |
< |
the_event->evt.ornt.z ); |
| 313 |
> |
current_atom->setOrientation( the_event->evt.ornt.phi, |
| 314 |
> |
the_event->evt.ornt.theta, |
| 315 |
> |
the_event->evt.ornt.psi ); |
| 316 |
|
return 1; |
| 317 |
|
} |
| 318 |
|
|
| 403 |
|
return 0; |
| 404 |
|
} |
| 405 |
|
|
| 406 |
< |
int MakeStamps::bondMember( event* the_event ){ |
| 406 |
> |
int MakeStamps::bondMembers( event* the_event ){ |
| 407 |
> |
|
| 408 |
> |
if( the_event->evt.mbrs.nMembers == 2 ){ |
| 409 |
> |
|
| 410 |
> |
current_bond->members( the_event->evt.mbrs.memberList[0], |
| 411 |
> |
the_event->evt.mbrs.memberList[1] ); |
| 412 |
> |
return 1; |
| 413 |
|
|
| 414 |
< |
current_bond->members( the_event->evt.mbr.a, |
| 415 |
< |
the_event->evt.mbr.b ); |
| 416 |
< |
return 1; |
| 414 |
> |
} else { |
| 415 |
> |
the_event->err_msg = strdup( "MakeStamp error. Wrong number of members " |
| 416 |
> |
" in bond"); |
| 417 |
> |
return 0; |
| 418 |
> |
|
| 419 |
> |
} |
| 420 |
> |
|
| 421 |
|
} |
| 422 |
|
|
| 423 |
|
int MakeStamps::bondConstraint( event* the_event ){ |
| 476 |
|
return 0; |
| 477 |
|
} |
| 478 |
|
|
| 479 |
< |
int MakeStamps::bendMember( event* the_event ){ |
| 479 |
> |
int MakeStamps::bendMembers( event* the_event ){ |
| 480 |
|
|
| 481 |
< |
current_bend->members( the_event->evt.mbr.a, |
| 482 |
< |
the_event->evt.mbr.b, |
| 483 |
< |
the_event->evt.mbr.c ); |
| 484 |
< |
return 1; |
| 481 |
> |
|
| 482 |
> |
switch( the_event->evt.mbrs.nMembers ) { |
| 483 |
> |
case 3: |
| 484 |
> |
current_bend->members( the_event->evt.mbrs.memberList[0], |
| 485 |
> |
the_event->evt.mbrs.memberList[1], |
| 486 |
> |
the_event->evt.mbrs.memberList[2]); |
| 487 |
> |
return 1; |
| 488 |
> |
break; |
| 489 |
> |
case 2: |
| 490 |
> |
current_bend->members( the_event->evt.mbrs.memberList[0], |
| 491 |
> |
the_event->evt.mbrs.memberList[1], |
| 492 |
> |
0 ); |
| 493 |
> |
return 1; |
| 494 |
> |
break; |
| 495 |
> |
default: |
| 496 |
> |
the_event->err_msg = strdup( "MakeStamp error. Wrong number of members " |
| 497 |
> |
"in bend."); |
| 498 |
> |
return 0; |
| 499 |
> |
break; |
| 500 |
> |
} |
| 501 |
> |
return 0; |
| 502 |
|
} |
| 503 |
|
|
| 504 |
|
int MakeStamps::bendConstraint( event* the_event ){ |
| 557 |
|
return 0; |
| 558 |
|
} |
| 559 |
|
|
| 560 |
< |
int MakeStamps::torsionMember( event* the_event ){ |
| 560 |
> |
int MakeStamps::torsionMembers( event* the_event ){ |
| 561 |
|
|
| 562 |
< |
current_torsion->members( the_event->evt.mbr.a, |
| 563 |
< |
the_event->evt.mbr.b, |
| 564 |
< |
the_event->evt.mbr.c, |
| 565 |
< |
the_event->evt.mbr.d ); |
| 566 |
< |
return 1; |
| 562 |
> |
if( the_event->evt.mbrs.nMembers == 4 ){ |
| 563 |
> |
|
| 564 |
> |
current_torsion->members( the_event->evt.mbrs.memberList[0], |
| 565 |
> |
the_event->evt.mbrs.memberList[1], |
| 566 |
> |
the_event->evt.mbrs.memberList[2], |
| 567 |
> |
the_event->evt.mbrs.memberList[3]); |
| 568 |
> |
return 1; |
| 569 |
> |
|
| 570 |
> |
} else { |
| 571 |
> |
the_event->err_msg = strdup( "MakeStamp error. Wrong number of members " |
| 572 |
> |
" in torsion"); |
| 573 |
> |
return 0; |
| 574 |
> |
|
| 575 |
> |
} |
| 576 |
|
} |
| 577 |
|
|
| 578 |
|
int MakeStamps::torsionConstraint( event* the_event ){ |