| 1 | #ifndef __GLOBALS_H__ | 
| 2 | #define __GLOBALS_H__ | 
| 3 |  | 
| 4 | #include <iostream> | 
| 5 |  | 
| 6 | #include <stdlib.h> | 
| 7 | #include <vector> | 
| 8 |  | 
| 9 | #include "BASS_interface.h" | 
| 10 | #include "Component.hpp" | 
| 11 | #include "LinkedCommand.hpp" | 
| 12 | #include "MakeStamps.hpp" | 
| 13 | #include "ZconStamp.hpp" | 
| 14 |  | 
| 15 | using namespace std; | 
| 16 |  | 
| 17 | class Globals{ | 
| 18 |  | 
| 19 | public: | 
| 20 |  | 
| 21 | Globals(); | 
| 22 | ~Globals(); | 
| 23 |  | 
| 24 | int newComponent( event* the_event ); | 
| 25 | int componentAssign( event* the_event ); | 
| 26 | int componentEnd( event* the_event ); | 
| 27 |  | 
| 28 | int newZconstraint( event* the_event ); | 
| 29 | int zConstraintAssign( event* the_event ); | 
| 30 | int zConstraintEnd( event* the_event ); | 
| 31 |  | 
| 32 | int globalAssign( event* the_event ); | 
| 33 | int globalEnd( event* the_event ); | 
| 34 |  | 
| 35 | char*  getForceField( void )      { return force_field; } | 
| 36 | int    getNComponents( void )     { return n_components; } | 
| 37 | double getTargetTemp( void )      { return target_temp; } | 
| 38 | double getTargetPressure( void )  { return target_pressure; } | 
| 39 | double getQmass( void )           { return q_mass; } | 
| 40 | double getTauThermostat( void )   { return tau_thermostat; } | 
| 41 | double getTauBarostat( void )     { return tau_barostat; } | 
| 42 | char*  getEnsemble( void )        { return ensemble; } | 
| 43 | double getDt( void )              { return dt; } | 
| 44 | double getRunTime( void )         { return run_time; } | 
| 45 |  | 
| 46 | int    getNzConstraints( void )   { return n_zConstraints; } | 
| 47 | char*  getInitialConfig( void )   { return initial_config; } | 
| 48 | char*  getFinalConfig( void )     { return final_config; } | 
| 49 | int    getNMol( void )            { return n_mol; } | 
| 50 | double getDensity( void )         { return density; } | 
| 51 | double getBox( void )             { return box; } | 
| 52 | double getBoxX( void )            { return box_x; } | 
| 53 | double getBoxY( void )            { return box_y; } | 
| 54 | double getBoxZ( void )            { return box_z; } | 
| 55 | double getSampleTime( void )      { return sample_time; } | 
| 56 | double getStatusTime( void )      { return status_time; } | 
| 57 | double getResetTime( void )       { return resetTime; } | 
| 58 | double getThermalTime( void )     { return thermal_time; } | 
| 59 | double getDielectric( void )      { return dielectric; } | 
| 60 | double getRcut( void )            { return rcut; } | 
| 61 | double getRsw( void )             { return rsw; } | 
| 62 | int    getTempSet( void )         { return tempSet; } | 
| 63 | int    getUseInitTime( void )     { return useInitTime; } | 
| 64 | int    getUseInitXSstate( void )  { return useInitXSstate; } | 
| 65 | double getOrthoBoxTolerance(void) { return orthoBoxTolerance; } | 
| 66 | int    getPBC( void )             { return usePBC; } | 
| 67 | int    getUseRF( void )           { return useRF; } | 
| 68 | char*  getMixingRule( void)       { return mixingRule; } | 
| 69 | double getZconsTime(void)         { return zcons_time; } | 
| 70 | double getZconsTol(void)          { return zcons_tol; } | 
| 71 | char*  getZconsForcePolicy(void)  { return zconsForcePolicy; } | 
| 72 | double getZconsGap(void)          { return zcons_gap; } | 
| 73 | double getZconsFixtime(void)      { return zcons_fixtime; } | 
| 74 | int    getZconsUsingSMD(void)     { return zcons_using_smd; } | 
| 75 | int    getSeed(void)              { return seed; } | 
| 76 | char*  getMinimizer(void)         { return minimizer_name; } | 
| 77 | int    getMinMaxIter(void)        { return minimizer_maxiteration; } | 
| 78 | int    getMinWriteFrq(void)       { return minimizer_writefrq; } | 
| 79 | double getMinStepSize(void)       { return minimizer_stepsize; } | 
| 80 | double getMinFTol(void)           { return minimizer_ftol; } | 
| 81 | double getMinGTol(void)           { return minimizer_gtol; } | 
| 82 | double getMinLSTol(void)          { return minimizer_ls_tol; } | 
| 83 | int    getMinLSMaxIter(void)      { return minimizer_ls_maxiteration; } | 
| 84 | int    getUseSolidThermInt(void)  { return useSolidThermInt; } | 
| 85 | int    getUseLiquidThermInt(void) { return useLiquidThermInt; } | 
| 86 | double getThermIntLambda(void)    { return thermodynamic_integration_lambda; } | 
| 87 | double getThermIntK(void)         { return thermodynamic_integration_k; } | 
| 88 | char*  getForceFieldVariant( void ) { return forcefield_variant; } | 
| 89 |  | 
| 90 | short int haveInitialConfig( void ) { return have_initial_config; } | 
| 91 | short int haveFinalConfig( void )   { return have_final_config; } | 
| 92 | short int haveNMol( void )          { return have_n_mol; } | 
| 93 | short int haveDensity( void )       { return have_density; } | 
| 94 | short int haveBox( void )           { return have_box; } | 
| 95 | short int haveBoxX( void )          { return have_box_x; } | 
| 96 | short int haveBoxY( void )          { return have_box_y; } | 
| 97 | short int haveBoxZ( void )          { return have_box_z; } | 
| 98 | short int haveSampleTime( void )    { return have_sample_time; } | 
| 99 | short int haveResetTime( void )     { return have_reset_time; } | 
| 100 | short int haveStatusTime( void )    { return have_status_time; } | 
| 101 | short int haveThermalTime( void )   { return have_thermal_time; } | 
| 102 | short int haveRcut( void )          { return have_rcut; } | 
| 103 | short int haveRsw( void )           { return have_rsw; } | 
| 104 | short int haveDielectric( void )    { return have_dielectric; } | 
| 105 | short int haveTempSet( void )       { return have_tempSet; } | 
| 106 | short int haveTargetPressure( void ){ return have_target_pressure; } | 
| 107 | short int haveQmass( void )         { return have_q_mass; } | 
| 108 | short int haveTauThermostat( void ) { return have_tau_thermostat; } | 
| 109 | short int haveTauBarostat( void )   { return have_tau_barostat; } | 
| 110 | short int haveZconstraintTime(void) { return have_zcons_time; } | 
| 111 | short int haveZconstraints( void )  { return have_zConstraints; } | 
| 112 | short int haveZconsTol(void)        { return have_zcons_tol; } | 
| 113 | short int haveZconsForcePolicy(void){ return have_zcons_force_policy; } | 
| 114 | short int haveZConsGap(void)        { return have_zcons_gap; } | 
| 115 | short int haveZConsFixTime(void)    { return have_zcons_fixtime; } | 
| 116 | short int haveZConsUsingSMD(void)   { return have_zcons_using_smd; } | 
| 117 | short int haveSeed(void)            { return have_seed; } | 
| 118 | short int haveMinimizer(void)       { return have_minimizer; } | 
| 119 | short int haveMinMaxIter(void)      { return have_minimizer_maxiteration; } | 
| 120 | short int haveMinWriteFrq(void)     { return have_minimizer_writefrq; } | 
| 121 | short int haveMinStepSize(void)     { return have_minimizer_stepsize; } | 
| 122 | short int haveMinFTol(void)         { return have_minimizer_ftol; } | 
| 123 | short int haveMinGTol(void)         { return have_minimizer_gtol; } | 
| 124 | short int haveMinLSTol(void)        { return have_minimizer_ls_tol; } | 
| 125 | short int haveMinLSMaxIter(void)    { return have_minimizer_ls_maxiteration;} | 
| 126 | short int haveThermIntLambda(void)  { return have_thermodynamic_integration_lambda; } | 
| 127 | short int haveThermIntK(void)       { return have_thermodynamic_integration_k; } | 
| 128 | short int haveForceFieldVariant(void) { return have_forcefield_variant; } | 
| 129 |  | 
| 130 | /* other accessors */ | 
| 131 | Component** getComponents( void )   { return components; } | 
| 132 | ZconStamp** getZconStamp( void )    { return zConstraints; } | 
| 133 |  | 
| 134 | private: | 
| 135 |  | 
| 136 | int hash_size; | 
| 137 | int hash_shift; | 
| 138 | int hash( char* text ); | 
| 139 | void addHash( char* text, int token ); | 
| 140 | LinkedCommand** command_table; | 
| 141 |  | 
| 142 | char* checkMe( void ); | 
| 143 |  | 
| 144 | Component* current_component; | 
| 145 | Component** components; // the array of components | 
| 146 |  | 
| 147 | ZconStamp* current_zConstraint; | 
| 148 | ZconStamp** zConstraints; // the array of zConstraints | 
| 149 |  | 
| 150 | char force_field[100]; | 
| 151 | int n_components; | 
| 152 | int n_zConstraints; | 
| 153 | double target_temp; | 
| 154 | double target_pressure; | 
| 155 | char ensemble[100]; | 
| 156 | char mixingRule[100]; | 
| 157 | double dt; | 
| 158 | double run_time; | 
| 159 | char initial_config[120]; | 
| 160 | char final_config[120]; | 
| 161 | int n_mol; | 
| 162 | double density; | 
| 163 | double box; | 
| 164 | double box_x, box_y, box_z; | 
| 165 | double sample_time; | 
| 166 | double status_time; | 
| 167 | double resetTime; | 
| 168 | double orthoBoxTolerance; | 
| 169 | double thermal_time; | 
| 170 | double rcut; | 
| 171 | double rsw; | 
| 172 | double dielectric; | 
| 173 | int tempSet; | 
| 174 | int useInitTime; | 
| 175 | int useInitXSstate; | 
| 176 | int usePBC; | 
| 177 | int useRF; | 
| 178 | double q_mass; | 
| 179 | double tau_thermostat; | 
| 180 | double tau_barostat; | 
| 181 | double zcons_time; | 
| 182 | double zcons_tol; | 
| 183 | char zconsForcePolicy[100]; | 
| 184 | double zcons_gap; | 
| 185 | double zcons_fixtime; | 
| 186 | int zcons_using_smd; | 
| 187 |  | 
| 188 | int seed; | 
| 189 | char minimizer_name[100]; | 
| 190 | int minimizer_maxiteration; | 
| 191 | int minimizer_writefrq; | 
| 192 | double minimizer_stepsize; | 
| 193 | double minimizer_ftol; | 
| 194 | double minimizer_gtol; | 
| 195 | double minimizer_ls_tol; | 
| 196 | int minimizer_ls_maxiteration; | 
| 197 | int useSolidThermInt; | 
| 198 | int useLiquidThermInt; | 
| 199 | double thermodynamic_integration_lambda; | 
| 200 | double thermodynamic_integration_k; | 
| 201 | char forcefield_variant[100]; | 
| 202 |  | 
| 203 | //required arguments | 
| 204 | short int have_force_field, have_n_components, have_target_temp; | 
| 205 | short int have_target_pressure, have_ensemble, have_dt, have_run_time; | 
| 206 |  | 
| 207 | // optional arguments | 
| 208 | short int have_initial_config, have_final_config, have_n_mol; | 
| 209 | short int have_density, have_box, have_box_x, have_box_y, have_box_z; | 
| 210 | short int have_sample_time, have_status_time, have_rcut, have_dielectric; | 
| 211 | short int have_tempSet, have_thermal_time, have_rsw, have_q_mass; | 
| 212 | short int have_tau_thermostat, have_tau_barostat; | 
| 213 | short int have_zcons_time, have_zConstraints, have_n_zConstraints; | 
| 214 | short int have_zcons_tol, have_seed; | 
| 215 | short int have_zcons_force_policy, have_reset_time; | 
| 216 | short int have_zcons_gap, have_zcons_fixtime; | 
| 217 | short int have_zcons_using_smd; | 
| 218 | short int have_minimizer, have_minimizer_maxiteration; | 
| 219 | short int have_minimizer_writefrq, have_minimizer_stepsize; | 
| 220 | short int have_minimizer_ftol, have_minimizer_gtol; | 
| 221 | short int have_minimizer_ls_tol, have_minimizer_ls_maxiteration; | 
| 222 | short int have_thermodynamic_integration_lambda; | 
| 223 | short int have_thermodynamic_integration_k; | 
| 224 | short int have_forcefield_variant; | 
| 225 | }; | 
| 226 |  | 
| 227 | #endif |