| 42 |
|
char* getEnsemble( void ) { return ensemble; } |
| 43 |
|
double getDt( void ) { return dt; } |
| 44 |
|
double getRunTime( void ) { return run_time; } |
| 45 |
< |
|
| 46 |
< |
|
| 45 |
> |
|
| 46 |
|
int getNzConstraints( void ) { return n_zConstraints; } |
| 47 |
|
char* getInitialConfig( void ) { return initial_config; } |
| 48 |
|
char* getFinalConfig( void ) { return final_config; } |
| 57 |
|
double getResetTime( void ) { return resetTime; } |
| 58 |
|
double getThermalTime( void ) { return thermal_time; } |
| 59 |
|
double getDielectric( void ) { return dielectric; } |
| 60 |
< |
double getECR( void) { return ecr; } |
| 61 |
< |
double getEST( void) { return est; } |
| 60 |
> |
double getRcut( void ) { return rcut; } |
| 61 |
> |
double getRsw( void ) { return rsw; } |
| 62 |
|
int getTempSet( void ) { return tempSet; } |
| 63 |
|
int getUseInitTime( void ) { return useInitTime; } |
| 64 |
< |
int getUseInitXSstate( void ) { return useInitXSstate; } |
| 64 |
> |
int getUseInitXSstate( void ) { return useInitXSstate; } |
| 65 |
|
double getOrthoBoxTolerance(void) { return orthoBoxTolerance; } |
| 66 |
< |
int getPBC( void ) { return usePBC;} |
| 67 |
< |
int getUseRF( void ) { return useRF;} |
| 68 |
< |
char* getMixingRule( void) { return mixingRule;} |
| 69 |
< |
double getZconsTime(void) { return zcons_time;} |
| 70 |
< |
double getZconsTol(void) { return zcons_tol;} |
| 71 |
< |
char* getZconsForcePolicy(void) { return zconsForcePolicy;} |
| 72 |
< |
double getZconsGap(void) {return zcons_gap;} |
| 73 |
< |
double getZconsFixtime(void) {return zcons_fixtime;} |
| 74 |
< |
int getZconsUsingSMD(void) {return zcons_using_smd;} |
| 75 |
< |
|
| 76 |
< |
int getSeed(void) { return seed;} |
| 77 |
< |
double getLJrcut(void) { return LJrcut;} |
| 66 |
> |
int getPBC( void ) { return usePBC; } |
| 67 |
> |
int getUseRF( void ) { return useRF; } |
| 68 |
> |
char* getMixingRule( void) { return mixingRule; } |
| 69 |
> |
double getZconsTime(void) { return zcons_time; } |
| 70 |
> |
double getZconsTol(void) { return zcons_tol; } |
| 71 |
> |
char* getZconsForcePolicy(void) { return zconsForcePolicy; } |
| 72 |
> |
double getZconsGap(void) { return zcons_gap; } |
| 73 |
> |
double getZconsFixtime(void) { return zcons_fixtime; } |
| 74 |
> |
int getZconsUsingSMD(void) { return zcons_using_smd; } |
| 75 |
> |
int getSeed(void) { return seed; } |
| 76 |
> |
char* getMinimizer(void) { return minimizer_name; } |
| 77 |
> |
int getMinMaxIter(void) { return minimizer_maxiteration; } |
| 78 |
> |
int getMinWriteFrq(void) { return minimizer_writefrq; } |
| 79 |
> |
double getMinStepSize(void) { return minimizer_stepsize; } |
| 80 |
> |
double getMinFTol(void) { return minimizer_ftol; } |
| 81 |
> |
double getMinGTol(void) { return minimizer_gtol; } |
| 82 |
> |
double getMinLSTol(void) { return minimizer_ls_tol; } |
| 83 |
> |
int getMinLSMaxIter(void) { return minimizer_ls_maxiteration; } |
| 84 |
|
|
| 80 |
– |
char* getMinimizer(void) { return minimizer_name;} |
| 81 |
– |
int getMinMaxIter(void) {return minimizer_maxiteration;} |
| 82 |
– |
int getMinWriteFrq(void) {return minimizer_writefrq;} |
| 83 |
– |
double getMinStepSize(void) {return minimizer_stepsize;} |
| 84 |
– |
double getMinFTol(void) {return minimizer_ftol;} |
| 85 |
– |
double getMinGTol(void) {return minimizer_gtol;} |
| 86 |
– |
double getMinLSTol(void) {return minimizer_ls_tol;} |
| 87 |
– |
int getMinLSMaxIter(void) {return minimizer_ls_maxiteration;} |
| 88 |
– |
|
| 89 |
– |
int getUseMolecularCutoffs( void ) {return useMolecularCutoffs;} |
| 90 |
– |
|
| 85 |
|
short int haveInitialConfig( void ) { return have_initial_config; } |
| 86 |
|
short int haveFinalConfig( void ) { return have_final_config; } |
| 87 |
|
short int haveNMol( void ) { return have_n_mol; } |
| 94 |
|
short int haveResetTime( void ) { return have_reset_time; } |
| 95 |
|
short int haveStatusTime( void ) { return have_status_time; } |
| 96 |
|
short int haveThermalTime( void ) { return have_thermal_time; } |
| 97 |
< |
short int haveECR( void ) { return have_ecr; } |
| 98 |
< |
short int haveEST( void ) { return have_est; } |
| 97 |
> |
short int haveRcut( void ) { return have_rcut; } |
| 98 |
> |
short int haveRsw( void ) { return have_rsw; } |
| 99 |
|
short int haveDielectric( void ) { return have_dielectric; } |
| 100 |
|
short int haveTempSet( void ) { return have_tempSet; } |
| 101 |
|
short int haveTargetPressure( void ){ return have_target_pressure; } |
| 102 |
|
short int haveQmass( void ) { return have_q_mass; } |
| 103 |
< |
short int haveTauThermostat( void ) { return have_tau_thermostat;} |
| 104 |
< |
short int haveTauBarostat( void ) { return have_tau_barostat;} |
| 103 |
> |
short int haveTauThermostat( void ) { return have_tau_thermostat; } |
| 104 |
> |
short int haveTauBarostat( void ) { return have_tau_barostat; } |
| 105 |
|
short int haveZconstraintTime(void) { return have_zcons_time; } |
| 106 |
< |
short int haveZconstraints( void ) { return have_zConstraints;} |
| 107 |
< |
short int haveZconsTol(void) { return have_zcons_tol;} |
| 108 |
< |
short int haveZconsForcePolicy(void){ return have_zcons_force_policy;} |
| 109 |
< |
short int haveZConsGap(void) {return have_zcons_gap;} |
| 110 |
< |
short int haveZConsFixTime(void) {return have_zcons_fixtime;} |
| 111 |
< |
short int haveZConsUsingSMD(void) {return have_zcons_using_smd;} |
| 112 |
< |
|
| 113 |
< |
short int haveSeed(void) { return have_seed;} |
| 114 |
< |
short int haveLJrcut(void) { return have_ljrcut;} |
| 115 |
< |
short int haveMinimizer(void) { return have_minimizer;} |
| 116 |
< |
short int haveMinMaxIter(void) {return have_minimizer_maxiteration;} |
| 117 |
< |
short int haveMinWriteFrq(void) {return have_minimizer_writefrq;} |
| 118 |
< |
short int haveMinStepSize(void) {return have_minimizer_stepsize;} |
| 119 |
< |
short int haveMinFTol(void) {return have_minimizer_ftol;} |
| 120 |
< |
short int haveMinGTol(void) {return have_minimizer_gtol;} |
| 127 |
< |
short int haveMinLSTol(void) {return have_minimizer_ls_tol;} |
| 128 |
< |
short int haveMinLSMaxIter(void) {return have_minimizer_ls_maxiteration;} |
| 129 |
< |
short int haveUseMolecularCutoffs(void) {return have_use_molecular_cutoffs;} |
| 106 |
> |
short int haveZconstraints( void ) { return have_zConstraints; } |
| 107 |
> |
short int haveZconsTol(void) { return have_zcons_tol; } |
| 108 |
> |
short int haveZconsForcePolicy(void){ return have_zcons_force_policy; } |
| 109 |
> |
short int haveZConsGap(void) { return have_zcons_gap; } |
| 110 |
> |
short int haveZConsFixTime(void) { return have_zcons_fixtime; } |
| 111 |
> |
short int haveZConsUsingSMD(void) { return have_zcons_using_smd; } |
| 112 |
> |
short int haveSeed(void) { return have_seed; } |
| 113 |
> |
short int haveMinimizer(void) { return have_minimizer; } |
| 114 |
> |
short int haveMinMaxIter(void) { return have_minimizer_maxiteration; } |
| 115 |
> |
short int haveMinWriteFrq(void) { return have_minimizer_writefrq; } |
| 116 |
> |
short int haveMinStepSize(void) { return have_minimizer_stepsize; } |
| 117 |
> |
short int haveMinFTol(void) { return have_minimizer_ftol; } |
| 118 |
> |
short int haveMinGTol(void) { return have_minimizer_gtol; } |
| 119 |
> |
short int haveMinLSTol(void) { return have_minimizer_ls_tol; } |
| 120 |
> |
short int haveMinLSMaxIter(void) { return have_minimizer_ls_maxiteration;} |
| 121 |
|
|
| 122 |
|
/* other accessors */ |
| 123 |
|
Component** getComponents( void ) { return components; } |
| 159 |
|
double resetTime; |
| 160 |
|
double orthoBoxTolerance; |
| 161 |
|
double thermal_time; |
| 162 |
< |
double ecr; |
| 163 |
< |
double est; |
| 162 |
> |
double rcut; |
| 163 |
> |
double rsw; |
| 164 |
|
double dielectric; |
| 165 |
|
int tempSet; |
| 166 |
|
int useInitTime; |
| 167 |
|
int useInitXSstate; |
| 168 |
|
int usePBC; |
| 169 |
|
int useRF; |
| 179 |
– |
int useMolecularCutoffs; |
| 170 |
|
double q_mass; |
| 171 |
|
double tau_thermostat; |
| 172 |
|
double tau_barostat; |
| 178 |
|
int zcons_using_smd; |
| 179 |
|
|
| 180 |
|
int seed; |
| 191 |
– |
double LJrcut; |
| 181 |
|
char minimizer_name[100]; |
| 182 |
|
int minimizer_maxiteration; |
| 183 |
|
int minimizer_writefrq; |
| 193 |
|
// optional arguments |
| 194 |
|
short int have_initial_config, have_final_config, have_n_mol; |
| 195 |
|
short int have_density, have_box, have_box_x, have_box_y, have_box_z; |
| 196 |
< |
short int have_sample_time, have_status_time, have_ecr, have_dielectric; |
| 197 |
< |
short int have_tempSet, have_thermal_time, have_est, have_q_mass; |
| 196 |
> |
short int have_sample_time, have_status_time, have_rcut, have_dielectric; |
| 197 |
> |
short int have_tempSet, have_thermal_time, have_rsw, have_q_mass; |
| 198 |
|
short int have_tau_thermostat, have_tau_barostat; |
| 199 |
|
short int have_zcons_time, have_zConstraints, have_n_zConstraints; |
| 200 |
< |
short int have_zcons_tol, have_seed, have_ljrcut; |
| 200 |
> |
short int have_zcons_tol, have_seed; |
| 201 |
|
short int have_zcons_force_policy, have_reset_time; |
| 202 |
|
short int have_zcons_gap, have_zcons_fixtime; |
| 203 |
|
short int have_zcons_using_smd; |
| 205 |
|
short int have_minimizer_writefrq, have_minimizer_stepsize; |
| 206 |
|
short int have_minimizer_ftol, have_minimizer_gtol; |
| 207 |
|
short int have_minimizer_ls_tol, have_minimizer_ls_maxiteration; |
| 219 |
– |
short int have_use_molecular_cutoffs; |
| 208 |
|
}; |
| 209 |
|
|
| 210 |
|
#endif |