| 1 |
< |
#include <cstdlib> |
| 2 |
< |
#include <cstdio> |
| 3 |
< |
#include <cstring> |
| 1 |
> |
#include <stdlib.h> |
| 2 |
> |
#include <stdio.h> |
| 3 |
> |
#include <string.h> |
| 4 |
|
|
| 5 |
|
#include "Globals.hpp" |
| 6 |
|
#include "simError.h" |
| 17 |
|
*/ |
| 18 |
|
|
| 19 |
|
//required parameters |
| 20 |
< |
#define G_FORCEFIELD 1 |
| 21 |
< |
#define G_NCOMPONENTS 2 |
| 22 |
< |
#define G_TARGETTEMP 3 |
| 23 |
< |
#define G_ENSEMBLE 4 |
| 24 |
< |
#define G_DT 5 |
| 25 |
< |
#define G_RUNTIME 6 |
| 20 |
> |
#define G_FORCEFIELD 1 |
| 21 |
> |
#define G_NCOMPONENTS 2 |
| 22 |
> |
#define G_TARGETTEMP 3 |
| 23 |
> |
#define G_ENSEMBLE 4 |
| 24 |
> |
#define G_DT 5 |
| 25 |
> |
#define G_RUNTIME 6 |
| 26 |
|
|
| 27 |
|
//optional parameters |
| 28 |
< |
#define G_INITIALCONFIG 7 |
| 29 |
< |
#define G_FINALCONFIG 8 |
| 30 |
< |
#define G_NMOL 9 |
| 31 |
< |
#define G_DENSITY 10 |
| 32 |
< |
#define G_BOX 11 |
| 33 |
< |
#define G_BOXX 12 |
| 34 |
< |
#define G_BOXY 13 |
| 35 |
< |
#define G_BOXZ 14 |
| 36 |
< |
#define G_SAMPLETIME 15 |
| 37 |
< |
#define G_STATUSTIME 16 |
| 38 |
< |
#define G_ECR 17 |
| 39 |
< |
#define G_DIELECTRIC 18 |
| 40 |
< |
#define G_TEMPSET 19 |
| 41 |
< |
#define G_THERMALTIME 20 |
| 42 |
< |
#define G_USEPBC 21 |
| 43 |
< |
#define G_MIXINGRULE 22 |
| 44 |
< |
#define G_EST 23 |
| 45 |
< |
#define G_USERF 24 |
| 46 |
< |
#define G_TARGETPRESSURE 25 |
| 47 |
< |
#define G_TAUTHERMOSTAT 26 |
| 48 |
< |
#define G_TAUBAROSTAT 27 |
| 49 |
< |
#define G_ZCONSTIME 28 |
| 50 |
< |
#define G_NZCONSTRAINTS 29 |
| 51 |
< |
#define G_ZCONSTOL 30 |
| 28 |
> |
#define G_INITIALCONFIG 7 |
| 29 |
> |
#define G_FINALCONFIG 8 |
| 30 |
> |
#define G_NMOL 9 |
| 31 |
> |
#define G_DENSITY 10 |
| 32 |
> |
#define G_BOX 11 |
| 33 |
> |
#define G_BOXX 12 |
| 34 |
> |
#define G_BOXY 13 |
| 35 |
> |
#define G_BOXZ 14 |
| 36 |
> |
#define G_SAMPLETIME 15 |
| 37 |
> |
#define G_STATUSTIME 16 |
| 38 |
> |
#define G_ECR 17 |
| 39 |
> |
#define G_DIELECTRIC 18 |
| 40 |
> |
#define G_TEMPSET 19 |
| 41 |
> |
#define G_THERMALTIME 20 |
| 42 |
> |
#define G_USEPBC 21 |
| 43 |
> |
#define G_MIXINGRULE 22 |
| 44 |
> |
#define G_EST 23 |
| 45 |
> |
#define G_USERF 24 |
| 46 |
> |
#define G_TARGETPRESSURE 25 |
| 47 |
> |
#define G_TAUTHERMOSTAT 26 |
| 48 |
> |
#define G_TAUBAROSTAT 27 |
| 49 |
> |
#define G_ZCONSTIME 28 |
| 50 |
> |
#define G_NZCONSTRAINTS 29 |
| 51 |
> |
#define G_ZCONSTOL 30 |
| 52 |
> |
#define G_ZCONSFORCEPOLICY 31 |
| 53 |
> |
#define G_SEED 32 |
| 54 |
> |
#define G_RESETTIME 33 |
| 55 |
> |
#define G_USEINITTIME 34 |
| 56 |
> |
#define G_USEINIT_XS_STATE 35 |
| 57 |
> |
#define G_ORTHOBOXTOLERANCE 36 |
| 58 |
> |
#define G_LJRCUT 37 |
| 59 |
|
|
| 60 |
+ |
|
| 61 |
|
Globals::Globals(){ |
| 62 |
|
|
| 63 |
|
int i; |
| 64 |
+ |
|
| 65 |
+ |
hash_size = 23; |
| 66 |
+ |
hash_shift = 4; |
| 67 |
|
|
| 68 |
|
components = NULL; |
| 69 |
|
|
| 87 |
|
addHash( "boxY", G_BOXY ); |
| 88 |
|
addHash( "boxZ", G_BOXZ ); |
| 89 |
|
addHash( "sampleTime", G_SAMPLETIME ); |
| 90 |
+ |
addHash( "resetTime", G_RESETTIME ); |
| 91 |
|
addHash( "statusTime", G_STATUSTIME ); |
| 92 |
|
addHash( "electrostaticCutoffRadius", G_ECR ); |
| 93 |
|
addHash( "dielectric", G_DIELECTRIC ); |
| 102 |
|
addHash( "tauBarostat", G_TAUBAROSTAT); |
| 103 |
|
addHash( "zconsTime", G_ZCONSTIME); |
| 104 |
|
addHash( "nZconstraints", G_NZCONSTRAINTS); |
| 105 |
< |
addHash( "zconsTol", G_ZCONSTOL); |
| 105 |
> |
addHash( "zconsTol", G_ZCONSTOL); |
| 106 |
> |
addHash( "zconsForcePolicy", G_ZCONSFORCEPOLICY); |
| 107 |
> |
addHash( "seed", G_SEED); |
| 108 |
> |
addHash( "useInitialTime", G_USEINITTIME); |
| 109 |
> |
addHash( "useInitialExtendedSystemState", G_USEINIT_XS_STATE); |
| 110 |
> |
addHash( "orthoBoxTolerance", G_ORTHOBOXTOLERANCE); |
| 111 |
> |
addHash( "LJrcut", G_LJRCUT); |
| 112 |
|
|
| 113 |
+ |
|
| 114 |
|
// define some default values |
| 115 |
|
|
| 116 |
|
strcpy( mixingRule,"standard"); //default mixing rules to standard. |
| 117 |
|
usePBC = 1; //default periodic boundry conditions to on |
| 118 |
|
useRF = 0; |
| 119 |
< |
|
| 119 |
> |
useInitTime = 1; // default to pull init time from the init file |
| 120 |
> |
useInitXSstate = 1; // default to pull the extended state from the init file |
| 121 |
> |
orthoBoxTolerance = 1E-6; |
| 122 |
> |
|
| 123 |
|
have_force_field = 0; |
| 124 |
|
have_n_components = 0; |
| 125 |
|
have_target_temp = 0; |
| 138 |
|
have_box_z = 0; |
| 139 |
|
have_sample_time = 0; |
| 140 |
|
have_status_time = 0; |
| 141 |
+ |
have_reset_time = 0; |
| 142 |
|
have_thermal_time = 0; |
| 143 |
|
have_ecr = 0; |
| 144 |
|
have_dielectric = 0; |
| 152 |
|
have_n_zConstraints = 0; |
| 153 |
|
have_zConstraints = 0; |
| 154 |
|
have_zcons_tol = 0; |
| 155 |
+ |
have_seed = 0; |
| 156 |
+ |
have_ljrcut = 0; |
| 157 |
|
|
| 158 |
|
} |
| 159 |
|
|
| 403 |
|
default: |
| 404 |
|
the_event->err_msg = |
| 405 |
|
strdup( "Global error. targetTemp unrecognized.\n" ); |
| 406 |
+ |
return 0; |
| 407 |
+ |
break; |
| 408 |
+ |
} |
| 409 |
+ |
break; |
| 410 |
+ |
|
| 411 |
+ |
case G_ORTHOBOXTOLERANCE: |
| 412 |
+ |
switch( the_type ){ |
| 413 |
+ |
|
| 414 |
+ |
case STRING: |
| 415 |
+ |
the_event->err_msg = |
| 416 |
+ |
strdup( "Global error. orthoBoxTolerance is not a double or int.\n" ); |
| 417 |
+ |
return 0; |
| 418 |
+ |
break; |
| 419 |
+ |
|
| 420 |
+ |
case DOUBLE: |
| 421 |
+ |
orthoBoxTolerance = the_event->evt.asmt.rhs.dval; |
| 422 |
+ |
have_target_temp = 1; |
| 423 |
+ |
return 1; |
| 424 |
+ |
break; |
| 425 |
+ |
|
| 426 |
+ |
case INT: |
| 427 |
+ |
orthoBoxTolerance = (double)the_event->evt.asmt.rhs.ival; |
| 428 |
+ |
have_target_temp = 1; |
| 429 |
+ |
return 1; |
| 430 |
+ |
break; |
| 431 |
+ |
|
| 432 |
+ |
default: |
| 433 |
+ |
the_event->err_msg = |
| 434 |
+ |
strdup( "Global error.orthoBoxTolerance unrecognized.\n" ); |
| 435 |
|
return 0; |
| 436 |
|
break; |
| 437 |
|
} |
| 769 |
|
default: |
| 770 |
|
the_event->err_msg = |
| 771 |
|
strdup( "Global error. statusTime unrecognized.\n" ); |
| 772 |
+ |
return 0; |
| 773 |
+ |
break; |
| 774 |
+ |
} |
| 775 |
+ |
break; |
| 776 |
+ |
|
| 777 |
+ |
case G_RESETTIME: |
| 778 |
+ |
switch( the_type ){ |
| 779 |
+ |
|
| 780 |
+ |
case STRING: |
| 781 |
+ |
the_event->err_msg = |
| 782 |
+ |
strdup( "Global error. resetTime is not a double or int.\n" ); |
| 783 |
+ |
return 0; |
| 784 |
+ |
break; |
| 785 |
+ |
|
| 786 |
+ |
case DOUBLE: |
| 787 |
+ |
resetTime = the_event->evt.asmt.rhs.dval; |
| 788 |
+ |
have_reset_time = 1; |
| 789 |
+ |
return 1; |
| 790 |
+ |
break; |
| 791 |
+ |
|
| 792 |
+ |
case INT: |
| 793 |
+ |
resetTime = (double)the_event->evt.asmt.rhs.ival; |
| 794 |
+ |
have_reset_time = 1; |
| 795 |
+ |
return 1; |
| 796 |
+ |
break; |
| 797 |
+ |
|
| 798 |
+ |
default: |
| 799 |
+ |
the_event->err_msg = |
| 800 |
+ |
strdup( "Global error. resetTime unrecognized.\n" ); |
| 801 |
|
return 0; |
| 802 |
|
break; |
| 803 |
|
} |
| 831 |
|
break; |
| 832 |
|
} |
| 833 |
|
break; |
| 834 |
+ |
|
| 835 |
+ |
case G_LJRCUT: |
| 836 |
+ |
switch( the_type ){ |
| 837 |
+ |
|
| 838 |
+ |
case STRING: |
| 839 |
+ |
the_event->err_msg = |
| 840 |
+ |
strdup( "Global error. LJrcut is not a double or int.\n" ); |
| 841 |
+ |
return 0; |
| 842 |
+ |
break; |
| 843 |
+ |
|
| 844 |
+ |
case DOUBLE: |
| 845 |
+ |
LJrcut = the_event->evt.asmt.rhs.dval; |
| 846 |
+ |
have_ljrcut = 1; |
| 847 |
+ |
return 1; |
| 848 |
+ |
break; |
| 849 |
+ |
|
| 850 |
+ |
case INT: |
| 851 |
+ |
LJrcut = (double)the_event->evt.asmt.rhs.ival; |
| 852 |
+ |
have_ljrcut = 1; |
| 853 |
+ |
return 1; |
| 854 |
+ |
break; |
| 855 |
+ |
|
| 856 |
+ |
default: |
| 857 |
+ |
the_event->err_msg = |
| 858 |
+ |
strdup( "Global error. LJrcut unrecognized.\n" ); |
| 859 |
+ |
return 0; |
| 860 |
+ |
break; |
| 861 |
+ |
} |
| 862 |
+ |
break; |
| 863 |
|
|
| 864 |
|
case G_ECR: |
| 865 |
|
switch( the_type ){ |
| 964 |
|
|
| 965 |
|
the_event->err_msg = |
| 966 |
|
strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); |
| 967 |
+ |
return 0; |
| 968 |
+ |
break; |
| 969 |
+ |
|
| 970 |
+ |
case G_USEINITTIME: |
| 971 |
+ |
if( the_type == STRING ){ |
| 972 |
+ |
|
| 973 |
+ |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useInitTime = 1; |
| 974 |
+ |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useInitTime = 0; |
| 975 |
+ |
else{ |
| 976 |
+ |
the_event->err_msg = |
| 977 |
+ |
strdup( "Global error. useInitTime was not \"true\" or \"false\".\n" ); |
| 978 |
+ |
return 0; |
| 979 |
+ |
} |
| 980 |
+ |
return 1; |
| 981 |
+ |
} |
| 982 |
+ |
|
| 983 |
+ |
the_event->err_msg = |
| 984 |
+ |
strdup( "Global error. useInitTime was not \"true\" or \"false\".\n" ); |
| 985 |
+ |
return 0; |
| 986 |
+ |
break; |
| 987 |
+ |
|
| 988 |
+ |
case G_USEINIT_XS_STATE: |
| 989 |
+ |
if( the_type == STRING ){ |
| 990 |
+ |
|
| 991 |
+ |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) |
| 992 |
+ |
useInitXSstate = 1; |
| 993 |
+ |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) |
| 994 |
+ |
useInitXSstate = 0; |
| 995 |
+ |
else{ |
| 996 |
+ |
the_event->err_msg = |
| 997 |
+ |
strdup( "Global error. useInitExtendedSystemState was not \"true\" or \"false\".\n" ); |
| 998 |
+ |
return 0; |
| 999 |
+ |
} |
| 1000 |
+ |
return 1; |
| 1001 |
+ |
} |
| 1002 |
+ |
|
| 1003 |
+ |
the_event->err_msg = |
| 1004 |
+ |
strdup( "Global error. useInitExtendedSystemState was not \"true\" or \"false\".\n" ); |
| 1005 |
|
return 0; |
| 1006 |
|
break; |
| 1007 |
|
|
| 1186 |
|
} |
| 1187 |
|
break; |
| 1188 |
|
|
| 1189 |
+ |
case G_ZCONSFORCEPOLICY: |
| 1190 |
+ |
switch( the_type ){ |
| 1191 |
+ |
|
| 1192 |
+ |
case STRING: |
| 1193 |
+ |
strcpy(zconsForcePolicy, the_event->evt.asmt.rhs.sval); |
| 1194 |
|
|
| 1195 |
+ |
for(int i = 0; zconsForcePolicy[i] != '\0'; i++) |
| 1196 |
+ |
{ |
| 1197 |
+ |
zconsForcePolicy[i] = toupper(zconsForcePolicy[i]); |
| 1198 |
+ |
} |
| 1199 |
+ |
have_zcons_force_policy = 1; |
| 1200 |
+ |
return 1; |
| 1201 |
+ |
break; |
| 1202 |
+ |
|
| 1203 |
+ |
case DOUBLE: |
| 1204 |
+ |
the_event->err_msg = |
| 1205 |
+ |
strdup( "Global error. zconsForcePolicy is not a double or int.\n" ); |
| 1206 |
+ |
return 0; |
| 1207 |
+ |
break; |
| 1208 |
+ |
|
| 1209 |
+ |
case INT: |
| 1210 |
+ |
the_event->err_msg = |
| 1211 |
+ |
strdup( "Global error. zconsForcePolicy is not a double or int.\n" ); |
| 1212 |
+ |
return 0; |
| 1213 |
+ |
break; |
| 1214 |
+ |
|
| 1215 |
+ |
default: |
| 1216 |
+ |
the_event->err_msg = |
| 1217 |
+ |
strdup( "Global error. zconsForcePolicy unrecognized.\n" ); |
| 1218 |
+ |
return 0; |
| 1219 |
+ |
break; |
| 1220 |
+ |
} |
| 1221 |
+ |
break; |
| 1222 |
|
// add more token cases here. |
| 1223 |
+ |
case G_SEED: |
| 1224 |
+ |
switch( the_type ){ |
| 1225 |
+ |
|
| 1226 |
+ |
case STRING: |
| 1227 |
+ |
the_event->err_msg = |
| 1228 |
+ |
strdup( "Global error. seed is not a string.\n" ); |
| 1229 |
+ |
return 0; |
| 1230 |
+ |
return 0; |
| 1231 |
+ |
break; |
| 1232 |
+ |
|
| 1233 |
+ |
case DOUBLE: |
| 1234 |
+ |
have_seed = 1; |
| 1235 |
+ |
seed = (int)the_event->evt.asmt.rhs.dval; |
| 1236 |
+ |
return 1; |
| 1237 |
+ |
break; |
| 1238 |
+ |
|
| 1239 |
+ |
case INT: |
| 1240 |
+ |
have_seed = 1; |
| 1241 |
+ |
seed = the_event->evt.asmt.rhs.ival ; |
| 1242 |
+ |
return 1; |
| 1243 |
+ |
break; |
| 1244 |
+ |
|
| 1245 |
+ |
default: |
| 1246 |
+ |
the_event->err_msg = |
| 1247 |
+ |
strdup( "Global error. seed unrecognized.\n" ); |
| 1248 |
+ |
return 0; |
| 1249 |
+ |
break; |
| 1250 |
+ |
} |
| 1251 |
+ |
break; |
| 1252 |
+ |
// add more token cases here. |
| 1253 |
|
|
| 1254 |
|
} |
| 1255 |
|
} |