25 |
|
#define G_RUNTIME 6 |
26 |
|
|
27 |
|
//optional parameters |
28 |
< |
#define G_INITIALCONFIG 7 |
29 |
< |
#define G_FINALCONFIG 8 |
30 |
< |
#define G_NMOL 9 |
31 |
< |
#define G_DENSITY 10 |
32 |
< |
#define G_BOX 11 |
33 |
< |
#define G_BOXX 12 |
34 |
< |
#define G_BOXY 13 |
35 |
< |
#define G_BOXZ 14 |
36 |
< |
#define G_SAMPLETIME 15 |
37 |
< |
#define G_STATUSTIME 16 |
38 |
< |
#define G_ECR 17 |
39 |
< |
#define G_DIELECTRIC 18 |
40 |
< |
#define G_TEMPSET 19 |
41 |
< |
#define G_THERMALTIME 20 |
42 |
< |
#define G_USEPBC 21 |
43 |
< |
#define G_MIXINGRULE 22 |
44 |
< |
#define G_EST 23 |
45 |
< |
#define G_USERF 24 |
28 |
> |
#define G_INITIALCONFIG 7 |
29 |
> |
#define G_FINALCONFIG 8 |
30 |
> |
#define G_NMOL 9 |
31 |
> |
#define G_DENSITY 10 |
32 |
> |
#define G_BOX 11 |
33 |
> |
#define G_BOXX 12 |
34 |
> |
#define G_BOXY 13 |
35 |
> |
#define G_BOXZ 14 |
36 |
> |
#define G_SAMPLETIME 15 |
37 |
> |
#define G_STATUSTIME 16 |
38 |
> |
#define G_ECR 17 |
39 |
> |
#define G_DIELECTRIC 18 |
40 |
> |
#define G_TEMPSET 19 |
41 |
> |
#define G_THERMALTIME 20 |
42 |
> |
#define G_USEPBC 21 |
43 |
> |
#define G_MIXINGRULE 22 |
44 |
> |
#define G_EST 23 |
45 |
> |
#define G_USERF 24 |
46 |
|
#define G_TARGETPRESSURE 25 |
47 |
< |
#define G_QMASS 26 |
48 |
< |
#define G_TAURELAX 27 |
47 |
> |
#define G_TAUTHERMOSTAT 26 |
48 |
> |
#define G_TAUBAROSTAT 27 |
49 |
> |
#define G_ZCONSTIME 28 |
50 |
> |
#define G_NZCONSTRAINTS 29 |
51 |
> |
#define G_ZCONSTOL 30 |
52 |
> |
#define G_ZCONSFORCEPOLICY 31 |
53 |
> |
#define G_SEED 32 |
54 |
|
|
50 |
– |
|
55 |
|
Globals::Globals(){ |
56 |
|
|
57 |
|
int i; |
88 |
|
addHash( "electrostaticSkinThickness", G_EST ); |
89 |
|
addHash( "useReactionField", G_USERF ); |
90 |
|
addHash( "targetPressure", G_TARGETPRESSURE); |
91 |
< |
addHash( "qMass", G_QMASS); |
92 |
< |
addHash( "tauRelax", G_TAURELAX); |
93 |
< |
|
91 |
> |
addHash( "tauThermostat", G_TAUTHERMOSTAT); |
92 |
> |
addHash( "tauBarostat", G_TAUBAROSTAT); |
93 |
> |
addHash( "zconsTime", G_ZCONSTIME); |
94 |
> |
addHash( "nZconstraints", G_NZCONSTRAINTS); |
95 |
> |
addHash( "zconsTol", G_ZCONSTOL); |
96 |
> |
addHash( "zconsForcePolicy", G_ZCONSFORCEPOLICY); |
97 |
> |
addHash( "seed", G_SEED); |
98 |
> |
|
99 |
> |
|
100 |
|
// define some default values |
101 |
|
|
102 |
|
strcpy( mixingRule,"standard"); //default mixing rules to standard. |
128 |
|
have_est = 0; |
129 |
|
have_target_pressure =0; |
130 |
|
have_q_mass = 0; |
131 |
< |
have_tau_relax = 0; |
132 |
< |
} |
131 |
> |
have_tau_thermostat = 0; |
132 |
> |
have_tau_barostat = 0; |
133 |
> |
have_zcons_time = 0; |
134 |
> |
have_n_zConstraints = 0; |
135 |
> |
have_zConstraints = 0; |
136 |
> |
have_zcons_tol = 0; |
137 |
> |
have_seed = 0; |
138 |
|
|
139 |
+ |
} |
140 |
+ |
|
141 |
|
Globals::~Globals(){ |
142 |
|
int i; |
143 |
|
|
210 |
|
return 0; |
211 |
|
} |
212 |
|
|
213 |
< |
int Globals::componentStartIndex( event* the_event ){ |
213 |
> |
int Globals::componentEnd( event* the_event ){ |
214 |
|
|
215 |
< |
current_component->startIndex( the_event->evt.si.array, |
216 |
< |
the_event->evt.si.n_elements ); |
215 |
> |
the_event->err_msg = current_component->checkMe(); |
216 |
> |
if( the_event->err_msg != NULL ) return 0; |
217 |
> |
|
218 |
|
return 1; |
219 |
|
} |
220 |
|
|
221 |
< |
int Globals::componentEnd( event* the_event ){ |
221 |
> |
int Globals::newZconstraint( event* the_event ){ |
222 |
> |
|
223 |
|
|
224 |
< |
the_event->err_msg = current_component->checkMe(); |
224 |
> |
int index = the_event->evt.blk_index; |
225 |
> |
char err[200]; |
226 |
> |
current_zConstraint = new ZconStamp( index ); |
227 |
> |
|
228 |
> |
have_zConstraints = 1; |
229 |
> |
|
230 |
> |
if( have_n_zConstraints && index < n_zConstraints ) |
231 |
> |
zConstraints[index] = current_zConstraint; |
232 |
> |
else{ |
233 |
> |
if( have_n_zConstraints ){ |
234 |
> |
sprintf( err, "Globals error, %d out of nZconstraints range", |
235 |
> |
index ); |
236 |
> |
the_event->err_msg = strdup( err ); |
237 |
> |
return 0; |
238 |
> |
} |
239 |
> |
else{ |
240 |
> |
the_event->err_msg = strdup("Globals error, nZconstraints" |
241 |
> |
" not given before" |
242 |
> |
" first zConstraint declaration." ); |
243 |
> |
return 0; |
244 |
> |
} |
245 |
> |
} |
246 |
> |
|
247 |
> |
return 1; |
248 |
> |
} |
249 |
> |
|
250 |
> |
|
251 |
> |
|
252 |
> |
int Globals::zConstraintAssign( event* the_event ){ |
253 |
> |
|
254 |
> |
switch( the_event->evt.asmt.asmt_type ){ |
255 |
> |
|
256 |
> |
case STRING: |
257 |
> |
return current_zConstraint->assignString( the_event->evt.asmt.lhs, |
258 |
> |
the_event->evt.asmt.rhs.sval, |
259 |
> |
&(the_event->err_msg)); |
260 |
> |
break; |
261 |
> |
|
262 |
> |
case DOUBLE: |
263 |
> |
return current_zConstraint->assignDouble( the_event->evt.asmt.lhs, |
264 |
> |
the_event->evt.asmt.rhs.dval, |
265 |
> |
&(the_event->err_msg)); |
266 |
> |
break; |
267 |
> |
|
268 |
> |
case INT: |
269 |
> |
return current_zConstraint->assignInt( the_event->evt.asmt.lhs, |
270 |
> |
the_event->evt.asmt.rhs.ival, |
271 |
> |
&(the_event->err_msg)); |
272 |
> |
break; |
273 |
> |
|
274 |
> |
default: |
275 |
> |
the_event->err_msg = strdup( "Globals error. Invalid zConstraint" |
276 |
> |
" assignment type" ); |
277 |
> |
return 0; |
278 |
> |
break; |
279 |
> |
} |
280 |
> |
return 0; |
281 |
> |
} |
282 |
> |
|
283 |
> |
int Globals::zConstraintEnd( event* the_event ){ |
284 |
> |
|
285 |
> |
the_event->err_msg = current_zConstraint->checkMe(); |
286 |
|
if( the_event->err_msg != NULL ) return 0; |
287 |
|
|
288 |
|
return 1; |
334 |
|
n_components = the_event->evt.asmt.rhs.ival; |
335 |
|
components = new Component*[n_components]; |
336 |
|
have_n_components = 1; |
337 |
+ |
return 1; |
338 |
+ |
} |
339 |
+ |
break; |
340 |
+ |
|
341 |
+ |
case G_NZCONSTRAINTS: |
342 |
+ |
if( the_type == STRING ){ |
343 |
+ |
the_event->err_msg = |
344 |
+ |
strdup("Global error. nZconstraints is not a double or an int.\n" ); |
345 |
+ |
return 0; |
346 |
+ |
} |
347 |
+ |
|
348 |
+ |
else if( the_type == DOUBLE ){ |
349 |
+ |
n_zConstraints = (int)the_event->evt.asmt.rhs.dval; |
350 |
+ |
zConstraints = new ZconStamp*[n_zConstraints]; |
351 |
+ |
have_n_zConstraints = 1; |
352 |
|
return 1; |
353 |
|
} |
354 |
+ |
|
355 |
+ |
else{ |
356 |
+ |
n_zConstraints = the_event->evt.asmt.rhs.ival; |
357 |
+ |
zConstraints = new ZconStamp*[n_zConstraints]; |
358 |
+ |
have_n_zConstraints = 1; |
359 |
+ |
return 1; |
360 |
+ |
} |
361 |
|
break; |
362 |
|
|
363 |
|
case G_TARGETTEMP: |
726 |
|
} |
727 |
|
break; |
728 |
|
|
729 |
< |
case G_THERMALTIME: |
729 |
> |
case G_THERMALTIME: |
730 |
|
switch( the_type ){ |
731 |
|
|
732 |
|
case STRING: |
926 |
|
} |
927 |
|
break; |
928 |
|
|
929 |
< |
case G_QMASS: |
929 |
> |
case G_TAUTHERMOSTAT: |
930 |
|
switch( the_type ){ |
931 |
|
|
932 |
|
case STRING: |
933 |
|
the_event->err_msg = |
934 |
< |
strdup( "Global error. qMass is not a double or int.\n" ); |
934 |
> |
strdup( "Global error. tauThermostat is not a double or int.\n" ); |
935 |
|
return 0; |
936 |
|
break; |
937 |
|
|
938 |
|
case DOUBLE: |
939 |
< |
q_mass = the_event->evt.asmt.rhs.dval; |
940 |
< |
have_q_mass = 1; |
939 |
> |
tau_thermostat = the_event->evt.asmt.rhs.dval; |
940 |
> |
have_tau_thermostat = 1; |
941 |
|
return 1; |
942 |
|
break; |
943 |
|
|
944 |
|
case INT: |
945 |
< |
q_mass = (double)the_event->evt.asmt.rhs.ival; |
946 |
< |
have_q_mass = 1; |
945 |
> |
tau_thermostat = (double)the_event->evt.asmt.rhs.ival; |
946 |
> |
have_tau_thermostat = 1; |
947 |
|
return 1; |
948 |
|
break; |
949 |
|
|
950 |
|
default: |
951 |
|
the_event->err_msg = |
952 |
< |
strdup( "Global error. qMass unrecognized.\n" ); |
952 |
> |
strdup( "Global error. tauThermostat unrecognized.\n" ); |
953 |
|
return 0; |
954 |
|
break; |
955 |
|
} |
956 |
|
break; |
957 |
|
|
958 |
< |
case G_TAURELAX: |
958 |
> |
case G_TAUBAROSTAT: |
959 |
|
switch( the_type ){ |
960 |
|
|
961 |
|
case STRING: |
962 |
|
the_event->err_msg = |
963 |
< |
strdup( "Global error. tauRelax is not a double or int.\n" ); |
963 |
> |
strdup( "Global error. tauBarostat is not a double or int.\n" ); |
964 |
|
return 0; |
965 |
|
break; |
966 |
|
|
967 |
|
case DOUBLE: |
968 |
< |
tau_relax = the_event->evt.asmt.rhs.dval; |
969 |
< |
have_tau_relax = 1; |
968 |
> |
tau_barostat = the_event->evt.asmt.rhs.dval; |
969 |
> |
have_tau_barostat = 1; |
970 |
|
return 1; |
971 |
|
break; |
972 |
|
|
973 |
|
case INT: |
974 |
< |
tau_relax = (double)the_event->evt.asmt.rhs.ival; |
975 |
< |
have_tau_relax = 1; |
974 |
> |
tau_barostat = (double)the_event->evt.asmt.rhs.ival; |
975 |
> |
have_tau_barostat = 1; |
976 |
|
return 1; |
977 |
|
break; |
978 |
|
|
979 |
|
default: |
980 |
|
the_event->err_msg = |
981 |
< |
strdup( "Global error. tauRelax unrecognized.\n" ); |
981 |
> |
strdup( "Global error. tauBarostat unrecognized.\n" ); |
982 |
|
return 0; |
983 |
|
break; |
984 |
|
} |
985 |
|
break; |
986 |
+ |
|
987 |
+ |
case G_ZCONSTIME: |
988 |
+ |
switch( the_type ){ |
989 |
+ |
|
990 |
+ |
case STRING: |
991 |
+ |
the_event->err_msg = |
992 |
+ |
strdup( "Global error. zcons_time is not a double or int.\n" ); |
993 |
+ |
return 0; |
994 |
+ |
break; |
995 |
+ |
|
996 |
+ |
case DOUBLE: |
997 |
+ |
zcons_time = the_event->evt.asmt.rhs.dval; |
998 |
+ |
have_zcons_time = 1; |
999 |
+ |
return 1; |
1000 |
+ |
break; |
1001 |
+ |
|
1002 |
+ |
case INT: |
1003 |
+ |
zcons_time = (double)the_event->evt.asmt.rhs.ival; |
1004 |
+ |
have_zcons_time = 1; |
1005 |
+ |
return 1; |
1006 |
+ |
break; |
1007 |
+ |
|
1008 |
+ |
default: |
1009 |
+ |
the_event->err_msg = |
1010 |
+ |
strdup( "Global error. zcons_time unrecognized.\n" ); |
1011 |
+ |
return 0; |
1012 |
+ |
break; |
1013 |
+ |
} |
1014 |
+ |
break; |
1015 |
|
|
1016 |
+ |
case G_ZCONSTOL: |
1017 |
+ |
switch( the_type ){ |
1018 |
+ |
|
1019 |
+ |
case STRING: |
1020 |
+ |
the_event->err_msg = |
1021 |
+ |
strdup( "Global error. zcons_tol is not a double or int.\n" ); |
1022 |
+ |
return 0; |
1023 |
+ |
break; |
1024 |
+ |
|
1025 |
+ |
case DOUBLE: |
1026 |
+ |
zcons_tol = the_event->evt.asmt.rhs.dval; |
1027 |
+ |
have_zcons_tol = 1; |
1028 |
+ |
return 1; |
1029 |
+ |
break; |
1030 |
+ |
|
1031 |
+ |
case INT: |
1032 |
+ |
zcons_tol = (double)the_event->evt.asmt.rhs.ival; |
1033 |
+ |
have_zcons_tol = 1; |
1034 |
+ |
return 1; |
1035 |
+ |
break; |
1036 |
+ |
|
1037 |
+ |
default: |
1038 |
+ |
the_event->err_msg = |
1039 |
+ |
strdup( "Global error. zcons_ol unrecognized.\n" ); |
1040 |
+ |
return 0; |
1041 |
+ |
break; |
1042 |
+ |
} |
1043 |
+ |
break; |
1044 |
+ |
|
1045 |
+ |
case G_ZCONSFORCEPOLICY: |
1046 |
+ |
switch( the_type ){ |
1047 |
+ |
|
1048 |
+ |
case STRING: |
1049 |
+ |
strcpy(zconsForcePolicy, the_event->evt.asmt.rhs.sval); |
1050 |
+ |
|
1051 |
+ |
for(int i = 0; zconsForcePolicy[i] != '\0'; i++) |
1052 |
+ |
{ |
1053 |
+ |
zconsForcePolicy[i] = toupper(zconsForcePolicy[i]); |
1054 |
+ |
} |
1055 |
+ |
have_zcons_force_policy = 1; |
1056 |
+ |
return 1; |
1057 |
+ |
break; |
1058 |
+ |
|
1059 |
+ |
case DOUBLE: |
1060 |
+ |
the_event->err_msg = |
1061 |
+ |
strdup( "Global error. zconsForcePolicy is not a double or int.\n" ); |
1062 |
+ |
return 0; |
1063 |
+ |
break; |
1064 |
+ |
|
1065 |
+ |
case INT: |
1066 |
+ |
the_event->err_msg = |
1067 |
+ |
strdup( "Global error. zconsForcePolicy is not a double or int.\n" ); |
1068 |
+ |
return 0; |
1069 |
+ |
break; |
1070 |
+ |
|
1071 |
+ |
default: |
1072 |
+ |
the_event->err_msg = |
1073 |
+ |
strdup( "Global error. zconsForcePolicy unrecognized.\n" ); |
1074 |
+ |
return 0; |
1075 |
+ |
break; |
1076 |
+ |
} |
1077 |
+ |
break; |
1078 |
+ |
// add more token cases here. |
1079 |
+ |
case G_SEED: |
1080 |
+ |
switch( the_type ){ |
1081 |
+ |
|
1082 |
+ |
case STRING: |
1083 |
+ |
the_event->err_msg = |
1084 |
+ |
strdup( "Global error. seed is not a string.\n" ); |
1085 |
+ |
return 0; |
1086 |
+ |
return 0; |
1087 |
+ |
break; |
1088 |
+ |
|
1089 |
+ |
case DOUBLE: |
1090 |
+ |
have_seed = 1; |
1091 |
+ |
seed = (int)the_event->evt.asmt.rhs.dval; |
1092 |
+ |
return 1; |
1093 |
+ |
break; |
1094 |
+ |
|
1095 |
+ |
case INT: |
1096 |
+ |
have_seed = 1; |
1097 |
+ |
seed = the_event->evt.asmt.rhs.ival ; |
1098 |
+ |
return 1; |
1099 |
+ |
break; |
1100 |
+ |
|
1101 |
+ |
default: |
1102 |
+ |
the_event->err_msg = |
1103 |
+ |
strdup( "Global error. seed unrecognized.\n" ); |
1104 |
+ |
return 0; |
1105 |
+ |
break; |
1106 |
+ |
} |
1107 |
+ |
break; |
1108 |
+ |
// add more token cases here. |
1109 |
+ |
|
1110 |
|
} |
1111 |
|
} |
1112 |
|
|