25 |
|
#define G_RUNTIME 6 |
26 |
|
|
27 |
|
//optional parameters |
28 |
< |
#define G_INITIALCONFIG 7 |
29 |
< |
#define G_FINALCONFIG 8 |
30 |
< |
#define G_NMOL 9 |
31 |
< |
#define G_DENSITY 10 |
32 |
< |
#define G_BOX 11 |
33 |
< |
#define G_BOXX 12 |
34 |
< |
#define G_BOXY 13 |
35 |
< |
#define G_BOXZ 14 |
36 |
< |
#define G_SAMPLETIME 15 |
37 |
< |
#define G_STATUSTIME 16 |
38 |
< |
#define G_RRF 17 |
39 |
< |
#define G_DIELECTRIC 18 |
40 |
< |
#define G_TEMPSET 19 |
41 |
< |
#define G_THERMALTIME 20 |
42 |
< |
#define G_USEPBC 21 |
43 |
< |
#define G_MIXINGRULE 22 |
28 |
> |
#define G_INITIALCONFIG 7 |
29 |
> |
#define G_FINALCONFIG 8 |
30 |
> |
#define G_NMOL 9 |
31 |
> |
#define G_DENSITY 10 |
32 |
> |
#define G_BOX 11 |
33 |
> |
#define G_BOXX 12 |
34 |
> |
#define G_BOXY 13 |
35 |
> |
#define G_BOXZ 14 |
36 |
> |
#define G_SAMPLETIME 15 |
37 |
> |
#define G_STATUSTIME 16 |
38 |
> |
#define G_ECR 17 |
39 |
> |
#define G_DIELECTRIC 18 |
40 |
> |
#define G_TEMPSET 19 |
41 |
> |
#define G_THERMALTIME 20 |
42 |
> |
#define G_USEPBC 21 |
43 |
> |
#define G_MIXINGRULE 22 |
44 |
> |
#define G_EST 23 |
45 |
> |
#define G_USERF 24 |
46 |
> |
#define G_TARGETPRESSURE 25 |
47 |
> |
#define G_TAUTHERMOSTAT 26 |
48 |
> |
#define G_TAUBAROSTAT 27 |
49 |
|
|
50 |
|
|
51 |
|
Globals::Globals(){ |
75 |
|
addHash( "boxZ", G_BOXZ ); |
76 |
|
addHash( "sampleTime", G_SAMPLETIME ); |
77 |
|
addHash( "statusTime", G_STATUSTIME ); |
78 |
< |
addHash( "rRF", G_RRF ); |
78 |
> |
addHash( "electrostaticCutoffRadius", G_ECR ); |
79 |
|
addHash( "dielectric", G_DIELECTRIC ); |
80 |
|
addHash( "tempSet", G_TEMPSET ); |
81 |
|
addHash( "thermalTime", G_THERMALTIME ); |
82 |
|
addHash( "mixingRule", G_MIXINGRULE); |
83 |
< |
addHash( "periodicBox", G_USEPBC); |
83 |
> |
addHash( "usePeriodicBoundaryConditions", G_USEPBC); |
84 |
> |
addHash( "electrostaticSkinThickness", G_EST ); |
85 |
> |
addHash( "useReactionField", G_USERF ); |
86 |
> |
addHash( "targetPressure", G_TARGETPRESSURE); |
87 |
> |
addHash( "tauThermostat", G_TAUTHERMOSTAT); |
88 |
> |
addHash( "tauBarostat", G_TAUBAROSTAT); |
89 |
|
|
90 |
|
// define some default values |
91 |
|
|
92 |
|
strcpy( mixingRule,"standard"); //default mixing rules to standard. |
93 |
|
usePBC = 1; //default periodic boundry conditions to on |
94 |
+ |
useRF = 0; |
95 |
|
|
85 |
– |
|
96 |
|
have_force_field = 0; |
97 |
|
have_n_components = 0; |
98 |
|
have_target_temp = 0; |
112 |
|
have_sample_time = 0; |
113 |
|
have_status_time = 0; |
114 |
|
have_thermal_time = 0; |
115 |
< |
have_rrf = 0; |
115 |
> |
have_ecr = 0; |
116 |
|
have_dielectric = 0; |
117 |
|
have_tempSet = 0; |
118 |
+ |
have_est = 0; |
119 |
+ |
have_target_pressure =0; |
120 |
+ |
have_q_mass = 0; |
121 |
+ |
have_tau_thermostat = 0; |
122 |
+ |
have_tau_barostat = 0; |
123 |
|
} |
124 |
|
|
125 |
|
Globals::~Globals(){ |
654 |
|
} |
655 |
|
break; |
656 |
|
|
657 |
< |
case G_RRF: |
657 |
> |
case G_ECR: |
658 |
|
switch( the_type ){ |
659 |
|
|
660 |
|
case STRING: |
661 |
|
the_event->err_msg = |
662 |
< |
strdup( "Global error. rRF is not a double or int.\n" ); |
662 |
> |
strdup( "Global error. electrostaticCutoffRadius is not a double or int.\n" ); |
663 |
|
return 0; |
664 |
|
break; |
665 |
|
|
666 |
|
case DOUBLE: |
667 |
< |
rRF = the_event->evt.asmt.rhs.dval; |
668 |
< |
have_rrf = 1; |
667 |
> |
ecr = the_event->evt.asmt.rhs.dval; |
668 |
> |
have_ecr = 1; |
669 |
|
return 1; |
670 |
|
break; |
671 |
|
|
672 |
|
case INT: |
673 |
< |
rRF = (double)the_event->evt.asmt.rhs.ival; |
674 |
< |
have_rrf = 1; |
673 |
> |
ecr = (double)the_event->evt.asmt.rhs.ival; |
674 |
> |
have_ecr = 1; |
675 |
|
return 1; |
676 |
|
break; |
677 |
|
|
678 |
|
default: |
679 |
|
the_event->err_msg = |
680 |
< |
strdup( "Global error. rRF unrecognized.\n" ); |
680 |
> |
strdup( "Global error. electrostaticCutoffRadius unrecognized.\n" ); |
681 |
|
return 0; |
682 |
|
break; |
683 |
|
} |
684 |
|
break; |
685 |
+ |
|
686 |
+ |
case G_EST: |
687 |
+ |
switch( the_type ){ |
688 |
+ |
|
689 |
+ |
case STRING: |
690 |
+ |
the_event->err_msg = |
691 |
+ |
strdup( "Global error. electrostaticSkinThickness is not a double or int.\n" ); |
692 |
+ |
return 0; |
693 |
+ |
break; |
694 |
+ |
|
695 |
+ |
case DOUBLE: |
696 |
+ |
est = the_event->evt.asmt.rhs.dval; |
697 |
+ |
have_est = 1; |
698 |
+ |
return 1; |
699 |
+ |
break; |
700 |
+ |
|
701 |
+ |
case INT: |
702 |
+ |
est = (double)the_event->evt.asmt.rhs.ival; |
703 |
+ |
have_est = 1; |
704 |
+ |
return 1; |
705 |
+ |
break; |
706 |
+ |
|
707 |
+ |
default: |
708 |
+ |
the_event->err_msg = |
709 |
+ |
strdup( "Global error. electrostaticSkinThickness unrecognized.\n" ); |
710 |
+ |
return 0; |
711 |
+ |
break; |
712 |
+ |
} |
713 |
+ |
break; |
714 |
|
|
715 |
|
case G_DIELECTRIC: |
716 |
|
switch( the_type ){ |
744 |
|
case G_TEMPSET: |
745 |
|
if( the_type == STRING ){ |
746 |
|
|
747 |
< |
if( !strcmp( "true", the_event->evt.asmt.rhs.sval )) tempSet = 1; |
748 |
< |
else if( !strcmp( "false", the_event->evt.asmt.rhs.sval )) tempSet = 0; |
747 |
> |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) tempSet = 1; |
748 |
> |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) tempSet = 0; |
749 |
|
else{ |
750 |
|
the_event->err_msg = |
751 |
|
strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); |
763 |
|
case G_USEPBC: |
764 |
|
if( the_type == STRING ){ |
765 |
|
|
766 |
< |
if( !strcmp( "true", the_event->evt.asmt.rhs.sval )) usePBC = 1; |
767 |
< |
else if( !strcmp( "false", the_event->evt.asmt.rhs.sval )) usePBC = 0; |
766 |
> |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) usePBC = 1; |
767 |
> |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) usePBC = 0; |
768 |
|
else{ |
769 |
|
the_event->err_msg = |
770 |
< |
strdup( "Global error. periodicBoundryConditions was not \"true\" or \"false\".\n" ); |
770 |
> |
strdup( "Global error. usePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); |
771 |
|
return 0; |
772 |
|
} |
773 |
|
return 1; |
774 |
|
} |
775 |
|
|
776 |
|
the_event->err_msg = |
777 |
< |
strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); |
777 |
> |
strdup( "Global error. usePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); |
778 |
|
return 0; |
779 |
|
break; |
780 |
+ |
|
781 |
+ |
case G_USERF: |
782 |
+ |
if( the_type == STRING ){ |
783 |
+ |
|
784 |
+ |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useRF = 1; |
785 |
+ |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useRF = 0; |
786 |
+ |
else{ |
787 |
+ |
the_event->err_msg = |
788 |
+ |
strdup( "Global error. useReactionField was not \"true\" or \"false\".\n" ); |
789 |
+ |
return 0; |
790 |
+ |
} |
791 |
+ |
return 1; |
792 |
+ |
} |
793 |
+ |
|
794 |
+ |
the_event->err_msg = |
795 |
+ |
strdup( "Global error. useReactionField was not \"true\" or \"false\".\n" ); |
796 |
+ |
return 0; |
797 |
+ |
break; |
798 |
+ |
|
799 |
+ |
case G_TARGETPRESSURE: |
800 |
+ |
switch( the_type ){ |
801 |
+ |
|
802 |
+ |
case STRING: |
803 |
+ |
the_event->err_msg = |
804 |
+ |
strdup( "Global error. targetPressure is not a double or int.\n" ); |
805 |
+ |
return 0; |
806 |
+ |
break; |
807 |
+ |
|
808 |
+ |
case DOUBLE: |
809 |
+ |
target_pressure = the_event->evt.asmt.rhs.dval; |
810 |
+ |
have_target_pressure = 1; |
811 |
+ |
return 1; |
812 |
+ |
break; |
813 |
+ |
|
814 |
+ |
case INT: |
815 |
+ |
target_pressure = (double)the_event->evt.asmt.rhs.ival; |
816 |
+ |
have_target_pressure = 1; |
817 |
+ |
return 1; |
818 |
+ |
break; |
819 |
+ |
|
820 |
+ |
default: |
821 |
+ |
the_event->err_msg = |
822 |
+ |
strdup( "Global error. targetPressure unrecognized.\n" ); |
823 |
+ |
return 0; |
824 |
+ |
break; |
825 |
+ |
} |
826 |
+ |
break; |
827 |
+ |
|
828 |
+ |
case G_TAUTHERMOSTAT: |
829 |
+ |
switch( the_type ){ |
830 |
+ |
|
831 |
+ |
case STRING: |
832 |
+ |
the_event->err_msg = |
833 |
+ |
strdup( "Global error. tauThermostat is not a double or int.\n" ); |
834 |
+ |
return 0; |
835 |
+ |
break; |
836 |
+ |
|
837 |
+ |
case DOUBLE: |
838 |
+ |
tau_thermostat = the_event->evt.asmt.rhs.dval; |
839 |
+ |
have_tau_thermostat = 1; |
840 |
+ |
return 1; |
841 |
+ |
break; |
842 |
+ |
|
843 |
+ |
case INT: |
844 |
+ |
tau_thermostat = (double)the_event->evt.asmt.rhs.ival; |
845 |
+ |
have_tau_thermostat = 1; |
846 |
+ |
return 1; |
847 |
+ |
break; |
848 |
+ |
|
849 |
+ |
default: |
850 |
+ |
the_event->err_msg = |
851 |
+ |
strdup( "Global error. tauThermostat unrecognized.\n" ); |
852 |
+ |
return 0; |
853 |
+ |
break; |
854 |
+ |
} |
855 |
+ |
break; |
856 |
+ |
|
857 |
+ |
case G_TAUBAROSTAT: |
858 |
+ |
switch( the_type ){ |
859 |
+ |
|
860 |
+ |
case STRING: |
861 |
+ |
the_event->err_msg = |
862 |
+ |
strdup( "Global error. tauBarostat is not a double or int.\n" ); |
863 |
+ |
return 0; |
864 |
+ |
break; |
865 |
+ |
|
866 |
+ |
case DOUBLE: |
867 |
+ |
tau_barostat = the_event->evt.asmt.rhs.dval; |
868 |
+ |
have_tau_barostat = 1; |
869 |
+ |
return 1; |
870 |
+ |
break; |
871 |
+ |
|
872 |
+ |
case INT: |
873 |
+ |
tau_barostat = (double)the_event->evt.asmt.rhs.ival; |
874 |
+ |
have_tau_barostat = 1; |
875 |
+ |
return 1; |
876 |
+ |
break; |
877 |
+ |
|
878 |
+ |
default: |
879 |
+ |
the_event->err_msg = |
880 |
+ |
strdup( "Global error. tauBarostat unrecognized.\n" ); |
881 |
+ |
return 0; |
882 |
+ |
break; |
883 |
+ |
} |
884 |
+ |
break; |
885 |
+ |
|
886 |
+ |
|
887 |
+ |
// add more token cases here. |
888 |
+ |
|
889 |
|
} |
890 |
|
} |
891 |
|
|