| 1 | #include <cstdlib> | 
| 2 | #include <cstdio> | 
| 3 | #include <cstring> | 
| 4 |  | 
| 5 | #include "Globals.hpp" | 
| 6 | #include "simError.h" | 
| 7 | #ifdef IS_MPI | 
| 8 | #include "mpiBASS.h" | 
| 9 | #endif // is_mpi | 
| 10 |  | 
| 11 | /* | 
| 12 | * The following section lists all of the defined tokens for the | 
| 13 | * gloabal assignment statements. All are prefixed with a G_ to avoid | 
| 14 | * stepping on any previously defined enumerations. | 
| 15 | * | 
| 16 | * NOTE: tokens start at 1, 0 is a resrved token number | 
| 17 | */ | 
| 18 |  | 
| 19 | //required parameters | 
| 20 | #define G_FORCEFIELD  1 | 
| 21 | #define G_NCOMPONENTS 2 | 
| 22 | #define G_TARGETTEMP  3 | 
| 23 | #define G_ENSEMBLE    4 | 
| 24 | #define G_DT          5 | 
| 25 | #define G_RUNTIME     6 | 
| 26 |  | 
| 27 | //optional parameters | 
| 28 | #define G_INITIALCONFIG   7 | 
| 29 | #define G_FINALCONFIG     8 | 
| 30 | #define G_NMOL            9 | 
| 31 | #define G_DENSITY        10 | 
| 32 | #define G_BOX            11 | 
| 33 | #define G_BOXX           12 | 
| 34 | #define G_BOXY           13 | 
| 35 | #define G_BOXZ           14 | 
| 36 | #define G_SAMPLETIME     15 | 
| 37 | #define G_STATUSTIME     16 | 
| 38 | #define G_ECR            17 | 
| 39 | #define G_DIELECTRIC     18 | 
| 40 | #define G_TEMPSET        19 | 
| 41 | #define G_THERMALTIME    20 | 
| 42 | #define G_USEPBC         21 | 
| 43 | #define G_MIXINGRULE     22 | 
| 44 | #define G_EST            23 | 
| 45 | #define G_USERF          24 | 
| 46 | #define G_TARGETPRESSURE 25 | 
| 47 | #define G_TAUTHERMOSTAT  26 | 
| 48 | #define G_TAUBAROSTAT    27 | 
| 49 | #define G_ZCONSTIME      28 | 
| 50 | #define G_ZCONSMOLINDEX  29 | 
| 51 |  | 
| 52 |  | 
| 53 | Globals::Globals(){ | 
| 54 |  | 
| 55 | int i; | 
| 56 |  | 
| 57 | components = NULL; | 
| 58 |  | 
| 59 | command_table = new LinkedCommand*[hash_size]; | 
| 60 | for( i=0; i<hash_size; i++ ) command_table[i] = NULL; | 
| 61 |  | 
| 62 | addHash( "forceField",    G_FORCEFIELD ); | 
| 63 | addHash( "nComponents",   G_NCOMPONENTS ); | 
| 64 | addHash( "targetTemp",    G_TARGETTEMP ); | 
| 65 | addHash( "ensemble",      G_ENSEMBLE ); | 
| 66 |  | 
| 67 | addHash( "dt",            G_DT ); | 
| 68 | addHash( "runTime",       G_RUNTIME ); | 
| 69 |  | 
| 70 | addHash( "initialConfig", G_INITIALCONFIG ); | 
| 71 | addHash( "finalConfig",   G_FINALCONFIG ); | 
| 72 | addHash( "nMol",          G_NMOL ); | 
| 73 | addHash( "density",       G_DENSITY ); | 
| 74 | addHash( "box",           G_BOX ); | 
| 75 | addHash( "boxX",          G_BOXX ); | 
| 76 | addHash( "boxY",          G_BOXY ); | 
| 77 | addHash( "boxZ",          G_BOXZ ); | 
| 78 | addHash( "sampleTime",    G_SAMPLETIME ); | 
| 79 | addHash( "statusTime",    G_STATUSTIME ); | 
| 80 | addHash( "electrostaticCutoffRadius",            G_ECR ); | 
| 81 | addHash( "dielectric",    G_DIELECTRIC ); | 
| 82 | addHash( "tempSet",       G_TEMPSET ); | 
| 83 | addHash( "thermalTime",   G_THERMALTIME ); | 
| 84 | addHash( "mixingRule",    G_MIXINGRULE); | 
| 85 | addHash( "usePeriodicBoundaryConditions",        G_USEPBC); | 
| 86 | addHash( "electrostaticSkinThickness",           G_EST ); | 
| 87 | addHash( "useReactionField",                     G_USERF ); | 
| 88 | addHash( "targetPressure",                       G_TARGETPRESSURE); | 
| 89 | addHash( "tauThermostat",                        G_TAUTHERMOSTAT); | 
| 90 | addHash( "tauBarostat",                          G_TAUBAROSTAT); | 
| 91 | addHash( "zconsTime",     G_ZCONSTIME); | 
| 92 | addHash( "zconsMolIndex", G_ZCONSMOLINDEX); | 
| 93 | // define some default values | 
| 94 |  | 
| 95 | strcpy( mixingRule,"standard");  //default mixing rules to standard. | 
| 96 | usePBC = 1; //default  periodic boundry conditions to on | 
| 97 | useRF  = 0; | 
| 98 |  | 
| 99 | have_force_field =  0; | 
| 100 | have_n_components = 0; | 
| 101 | have_target_temp =  0; | 
| 102 | have_ensemble =     0; | 
| 103 | have_dt =           0; | 
| 104 | have_run_time =     0; | 
| 105 |  | 
| 106 | have_initial_config = 0; | 
| 107 | have_final_config =   0; | 
| 108 | have_n_mol =          0; | 
| 109 | have_density =        0; | 
| 110 | have_box =            0; | 
| 111 | have_box_x =          0; | 
| 112 | have_box_y =          0; | 
| 113 | have_box_y =          0; | 
| 114 | have_box_z =          0; | 
| 115 | have_sample_time =    0; | 
| 116 | have_status_time =    0; | 
| 117 | have_thermal_time =   0; | 
| 118 | have_ecr =            0; | 
| 119 | have_dielectric =     0; | 
| 120 | have_tempSet =        0; | 
| 121 | have_est =            0; | 
| 122 | have_target_pressure =0; | 
| 123 | have_q_mass =         0; | 
| 124 | have_tau_thermostat = 0; | 
| 125 | have_tau_barostat =   0; | 
| 126 | have_zcons_time = 0; | 
| 127 | have_index_of_all_zcons_mols = 0; | 
| 128 | } | 
| 129 |  | 
| 130 | Globals::~Globals(){ | 
| 131 | int i; | 
| 132 |  | 
| 133 | for( i=0; i<hash_size; i++ ){ | 
| 134 | if( command_table[i] != NULL ) delete command_table[i]; | 
| 135 | } | 
| 136 | delete[] command_table; | 
| 137 |  | 
| 138 | if( components != NULL ){ | 
| 139 | for( i=0; i<n_components; i++ ) delete components[i]; | 
| 140 | delete[] components; | 
| 141 | } | 
| 142 | } | 
| 143 |  | 
| 144 | int Globals::newComponent( event* the_event ){ | 
| 145 |  | 
| 146 | current_component = new Component; | 
| 147 | int index = the_event->evt.blk_index; | 
| 148 | char err[200]; | 
| 149 |  | 
| 150 | if( have_n_components && index < n_components ) | 
| 151 | components[index] = current_component; | 
| 152 | else{ | 
| 153 | if( have_n_components ){ | 
| 154 | sprintf( err, "Globals error, %d out of nComponents range", | 
| 155 | index ); | 
| 156 | the_event->err_msg = strdup( err ); | 
| 157 | return 0; | 
| 158 | } | 
| 159 | else{ | 
| 160 | the_event->err_msg = strdup("Globals error, nComponents not given before" | 
| 161 | "first component declaration." ); | 
| 162 | return 0; | 
| 163 | } | 
| 164 | } | 
| 165 |  | 
| 166 | return 1; | 
| 167 | } | 
| 168 |  | 
| 169 |  | 
| 170 |  | 
| 171 | int Globals::componentAssign( event* the_event ){ | 
| 172 |  | 
| 173 | switch( the_event->evt.asmt.asmt_type ){ | 
| 174 |  | 
| 175 | case STRING: | 
| 176 | return current_component->assignString( the_event->evt.asmt.lhs, | 
| 177 | the_event->evt.asmt.rhs.sval, | 
| 178 | &(the_event->err_msg)); | 
| 179 | break; | 
| 180 |  | 
| 181 | case DOUBLE: | 
| 182 | return current_component->assignDouble( the_event->evt.asmt.lhs, | 
| 183 | the_event->evt.asmt.rhs.dval, | 
| 184 | &(the_event->err_msg)); | 
| 185 | break; | 
| 186 |  | 
| 187 | case INT: | 
| 188 | return current_component->assignInt( the_event->evt.asmt.lhs, | 
| 189 | the_event->evt.asmt.rhs.ival, | 
| 190 | &(the_event->err_msg)); | 
| 191 | break; | 
| 192 |  | 
| 193 | default: | 
| 194 | the_event->err_msg = strdup( "Globals error. Invalid component" | 
| 195 | " assignment type" ); | 
| 196 | return 0; | 
| 197 | break; | 
| 198 | } | 
| 199 | return 0; | 
| 200 | } | 
| 201 |  | 
| 202 | int Globals::componentStartIndex( event* the_event ){ | 
| 203 |  | 
| 204 | current_component->startIndex( the_event->evt.si.array, | 
| 205 | the_event->evt.si.n_elements ); | 
| 206 | return 1; | 
| 207 | } | 
| 208 |  | 
| 209 | int Globals::componentEnd( event* the_event ){ | 
| 210 |  | 
| 211 | the_event->err_msg = current_component->checkMe(); | 
| 212 | if( the_event->err_msg != NULL ) return 0; | 
| 213 |  | 
| 214 | return 1; | 
| 215 | } | 
| 216 |  | 
| 217 | int Globals::globalAssign( event* the_event ){ | 
| 218 |  | 
| 219 | int key; | 
| 220 | int token; | 
| 221 | interface_assign_type the_type =  the_event->evt.asmt.asmt_type; | 
| 222 | char* lhs = the_event->evt.asmt.lhs; | 
| 223 | char err[300]; | 
| 224 |  | 
| 225 | token = 0; | 
| 226 | key = hash( lhs ); | 
| 227 | if( command_table[key] != NULL ) token = command_table[key]->match( lhs ); | 
| 228 |  | 
| 229 | if( token ){ | 
| 230 |  | 
| 231 | switch( token ){ | 
| 232 |  | 
| 233 | case G_FORCEFIELD: | 
| 234 | if( the_type == STRING ){ | 
| 235 | strcpy( force_field, the_event->evt.asmt.rhs.sval ); | 
| 236 | have_force_field = 1; | 
| 237 | return 1; | 
| 238 | } | 
| 239 |  | 
| 240 | the_event->err_msg = | 
| 241 | strdup( "Global error. forceField was not a string assignment.\n" ); | 
| 242 | return 0; | 
| 243 | break; | 
| 244 |  | 
| 245 | case G_NCOMPONENTS: | 
| 246 | if( the_type == STRING ){ | 
| 247 | the_event->err_msg = | 
| 248 | strdup("Global error. nComponents is not a double or an int.\n" ); | 
| 249 | return 0; | 
| 250 | } | 
| 251 |  | 
| 252 | else if( the_type == DOUBLE ){ | 
| 253 | n_components = (int)the_event->evt.asmt.rhs.dval; | 
| 254 | components = new Component*[n_components]; | 
| 255 | have_n_components = 1; | 
| 256 | return 1; | 
| 257 | } | 
| 258 |  | 
| 259 | else{ | 
| 260 | n_components = the_event->evt.asmt.rhs.ival; | 
| 261 | components = new Component*[n_components]; | 
| 262 | have_n_components = 1; | 
| 263 | return 1; | 
| 264 | } | 
| 265 | break; | 
| 266 |  | 
| 267 | case G_TARGETTEMP: | 
| 268 | switch( the_type ){ | 
| 269 |  | 
| 270 | case STRING: | 
| 271 | the_event->err_msg = | 
| 272 | strdup( "Global error. targetTemp is not a double or int.\n" ); | 
| 273 | return 0; | 
| 274 | break; | 
| 275 |  | 
| 276 | case DOUBLE: | 
| 277 | target_temp = the_event->evt.asmt.rhs.dval; | 
| 278 | have_target_temp = 1; | 
| 279 | return 1; | 
| 280 | break; | 
| 281 |  | 
| 282 | case INT: | 
| 283 | target_temp = (double)the_event->evt.asmt.rhs.ival; | 
| 284 | have_target_temp = 1; | 
| 285 | return 1; | 
| 286 | break; | 
| 287 |  | 
| 288 | default: | 
| 289 | the_event->err_msg = | 
| 290 | strdup( "Global error. targetTemp unrecognized.\n" ); | 
| 291 | return 0; | 
| 292 | break; | 
| 293 | } | 
| 294 | break; | 
| 295 |  | 
| 296 | case G_ENSEMBLE: | 
| 297 | if( the_type == STRING ){ | 
| 298 | strcpy( ensemble, the_event->evt.asmt.rhs.sval ); | 
| 299 | have_ensemble = 1; | 
| 300 | return 1; | 
| 301 | } | 
| 302 |  | 
| 303 | the_event->err_msg = | 
| 304 | strdup( "Global error. ensemble was not assigned to a string\n" ); | 
| 305 | return 0; | 
| 306 | break; | 
| 307 |  | 
| 308 | case G_MIXINGRULE: | 
| 309 | if( the_type == STRING ){ | 
| 310 | strcpy( mixingRule, the_event->evt.asmt.rhs.sval ); | 
| 311 | return 1; | 
| 312 | } | 
| 313 |  | 
| 314 | the_event->err_msg = | 
| 315 | strdup( "Global error. mixing rule was not assigned to a string\n" ); | 
| 316 | return 0; | 
| 317 | break; | 
| 318 |  | 
| 319 | case G_DT: | 
| 320 | switch( the_type ){ | 
| 321 |  | 
| 322 | case STRING: | 
| 323 | the_event->err_msg = | 
| 324 | strdup( "Global error. dt is not a double or int.\n" ); | 
| 325 | return 0; | 
| 326 | break; | 
| 327 |  | 
| 328 | case DOUBLE: | 
| 329 | dt = the_event->evt.asmt.rhs.dval; | 
| 330 | have_dt = 1; | 
| 331 | return 1; | 
| 332 | break; | 
| 333 |  | 
| 334 | case INT: | 
| 335 | dt = (double)the_event->evt.asmt.rhs.ival; | 
| 336 | have_dt = 1; | 
| 337 | return 1; | 
| 338 | break; | 
| 339 |  | 
| 340 | default: | 
| 341 | the_event->err_msg = | 
| 342 | strdup( "Global error. dt unrecognized.\n" ); | 
| 343 | return 0; | 
| 344 | break; | 
| 345 | } | 
| 346 | break; | 
| 347 |  | 
| 348 | case G_RUNTIME: | 
| 349 | switch( the_type ){ | 
| 350 |  | 
| 351 | case STRING: | 
| 352 | the_event->err_msg = | 
| 353 | strdup( "Global error. runTime is not a double or int.\n" ); | 
| 354 | return 0; | 
| 355 | break; | 
| 356 |  | 
| 357 | case DOUBLE: | 
| 358 | run_time = the_event->evt.asmt.rhs.dval; | 
| 359 | have_run_time = 1; | 
| 360 | return 1; | 
| 361 | break; | 
| 362 |  | 
| 363 | case INT: | 
| 364 | run_time = (double)the_event->evt.asmt.rhs.ival; | 
| 365 | have_run_time = 1; | 
| 366 | return 1; | 
| 367 | break; | 
| 368 |  | 
| 369 | default: | 
| 370 | the_event->err_msg = | 
| 371 | strdup( "Global error. runTime unrecognized.\n" ); | 
| 372 | return 0; | 
| 373 | break; | 
| 374 | } | 
| 375 | break; | 
| 376 |  | 
| 377 | case G_INITIALCONFIG: | 
| 378 | if( the_type == STRING ){ | 
| 379 | strcpy( initial_config, the_event->evt.asmt.rhs.sval ); | 
| 380 | have_initial_config = 1; | 
| 381 | return 1; | 
| 382 | } | 
| 383 |  | 
| 384 | the_event->err_msg = | 
| 385 | strdup( "Global error. initialConfig was not a string assignment.\n" ); | 
| 386 | return 0; | 
| 387 | break; | 
| 388 |  | 
| 389 | case G_FINALCONFIG: | 
| 390 | if( the_type == STRING ){ | 
| 391 | strcpy( final_config, the_event->evt.asmt.rhs.sval ); | 
| 392 | have_final_config = 1; | 
| 393 | return 1; | 
| 394 | } | 
| 395 |  | 
| 396 | the_event->err_msg = | 
| 397 | strdup( "Global error. finalConfig was not a string assignment.\n" ); | 
| 398 | return 0; | 
| 399 | break; | 
| 400 |  | 
| 401 | case G_NMOL: | 
| 402 | switch( the_type ){ | 
| 403 |  | 
| 404 | case STRING: | 
| 405 | the_event->err_msg = | 
| 406 | strdup( "Global error. nMol is not a double or int.\n" ); | 
| 407 | return 0; | 
| 408 | break; | 
| 409 |  | 
| 410 | case DOUBLE: | 
| 411 | n_mol = (int)the_event->evt.asmt.rhs.dval; | 
| 412 | have_n_mol = 1; | 
| 413 | return 1; | 
| 414 | break; | 
| 415 |  | 
| 416 | case INT: | 
| 417 | n_mol = the_event->evt.asmt.rhs.ival; | 
| 418 | have_n_mol = 1; | 
| 419 | return 1; | 
| 420 | break; | 
| 421 |  | 
| 422 | default: | 
| 423 | the_event->err_msg = | 
| 424 | strdup( "Global error. nMol unrecognized.\n" ); | 
| 425 | return 0; | 
| 426 | break; | 
| 427 | } | 
| 428 | break; | 
| 429 |  | 
| 430 | case G_DENSITY: | 
| 431 | switch( the_type ){ | 
| 432 |  | 
| 433 | case STRING: | 
| 434 | the_event->err_msg = | 
| 435 | strdup( "Global error. density is not a double or int.\n" ); | 
| 436 | return 0; | 
| 437 | break; | 
| 438 |  | 
| 439 | case DOUBLE: | 
| 440 | density = the_event->evt.asmt.rhs.dval; | 
| 441 | have_density = 1; | 
| 442 | return 1; | 
| 443 | break; | 
| 444 |  | 
| 445 | case INT: | 
| 446 | density = (double)the_event->evt.asmt.rhs.ival; | 
| 447 | have_density = 1; | 
| 448 | return 1; | 
| 449 | break; | 
| 450 |  | 
| 451 | default: | 
| 452 | the_event->err_msg = | 
| 453 | strdup( "Global error. density unrecognized.\n" ); | 
| 454 | return 0; | 
| 455 | break; | 
| 456 | } | 
| 457 | break; | 
| 458 |  | 
| 459 | case G_BOX: | 
| 460 | switch( the_type ){ | 
| 461 |  | 
| 462 | case STRING: | 
| 463 | the_event->err_msg = | 
| 464 | strdup( "Global error. box is not a double or int.\n" ); | 
| 465 | return 0; | 
| 466 | break; | 
| 467 |  | 
| 468 | case DOUBLE: | 
| 469 | box = the_event->evt.asmt.rhs.dval; | 
| 470 | have_box = 1; | 
| 471 | return 1; | 
| 472 | break; | 
| 473 |  | 
| 474 | case INT: | 
| 475 | box = (double)the_event->evt.asmt.rhs.ival; | 
| 476 | have_box = 1; | 
| 477 | return 1; | 
| 478 | break; | 
| 479 |  | 
| 480 | default: | 
| 481 | the_event->err_msg = | 
| 482 | strdup( "Global error. box unrecognized.\n" ); | 
| 483 | return 0; | 
| 484 | break; | 
| 485 | } | 
| 486 | break; | 
| 487 |  | 
| 488 | case G_BOXX: | 
| 489 | switch( the_type ){ | 
| 490 |  | 
| 491 | case STRING: | 
| 492 | the_event->err_msg = | 
| 493 | strdup( "Global error. boxX is not a double or int.\n" ); | 
| 494 | return 0; | 
| 495 | break; | 
| 496 |  | 
| 497 | case DOUBLE: | 
| 498 | box_x = the_event->evt.asmt.rhs.dval; | 
| 499 | have_box_x = 1; | 
| 500 | return 1; | 
| 501 | break; | 
| 502 |  | 
| 503 | case INT: | 
| 504 | box_x = (double)the_event->evt.asmt.rhs.ival; | 
| 505 | have_box_x = 1; | 
| 506 | return 1; | 
| 507 | break; | 
| 508 |  | 
| 509 | default: | 
| 510 | the_event->err_msg = | 
| 511 | strdup( "Global error. boxX unrecognized.\n" ); | 
| 512 | return 0; | 
| 513 | break; | 
| 514 | } | 
| 515 | break; | 
| 516 |  | 
| 517 | case G_BOXY: | 
| 518 | switch( the_type ){ | 
| 519 |  | 
| 520 | case STRING: | 
| 521 | the_event->err_msg = | 
| 522 | strdup( "Global error. boxY is not a double or int.\n" ); | 
| 523 | return 0; | 
| 524 | break; | 
| 525 |  | 
| 526 | case DOUBLE: | 
| 527 | box_y = the_event->evt.asmt.rhs.dval; | 
| 528 | have_box_y = 1; | 
| 529 | return 1; | 
| 530 | break; | 
| 531 |  | 
| 532 | case INT: | 
| 533 | box_y = (double)the_event->evt.asmt.rhs.ival; | 
| 534 | have_box_y = 1; | 
| 535 | return 1; | 
| 536 | break; | 
| 537 |  | 
| 538 | default: | 
| 539 | the_event->err_msg = | 
| 540 | strdup( "Global error. boxY unrecognized.\n" ); | 
| 541 | return 0; | 
| 542 | break; | 
| 543 | } | 
| 544 | break; | 
| 545 |  | 
| 546 | case G_BOXZ: | 
| 547 | switch( the_type ){ | 
| 548 |  | 
| 549 | case STRING: | 
| 550 | the_event->err_msg = | 
| 551 | strdup( "Global error. boxZ is not a double or int.\n" ); | 
| 552 | return 0; | 
| 553 | break; | 
| 554 |  | 
| 555 | case DOUBLE: | 
| 556 | box_z = the_event->evt.asmt.rhs.dval; | 
| 557 | have_box_z = 1; | 
| 558 | return 1; | 
| 559 | break; | 
| 560 |  | 
| 561 | case INT: | 
| 562 | box_z = (double)the_event->evt.asmt.rhs.ival; | 
| 563 | have_box_z = 1; | 
| 564 | return 1; | 
| 565 | break; | 
| 566 |  | 
| 567 | default: | 
| 568 | the_event->err_msg = | 
| 569 | strdup( "Global error. boxZ unrecognized.\n" ); | 
| 570 | return 0; | 
| 571 | break; | 
| 572 | } | 
| 573 | break; | 
| 574 |  | 
| 575 | case G_SAMPLETIME: | 
| 576 | switch( the_type ){ | 
| 577 |  | 
| 578 | case STRING: | 
| 579 | the_event->err_msg = | 
| 580 | strdup( "Global error. sampleTime is not a double or int.\n" ); | 
| 581 | return 0; | 
| 582 | break; | 
| 583 |  | 
| 584 | case DOUBLE: | 
| 585 | sample_time = the_event->evt.asmt.rhs.dval; | 
| 586 | have_sample_time = 1; | 
| 587 | return 1; | 
| 588 | break; | 
| 589 |  | 
| 590 | case INT: | 
| 591 | sample_time = (double)the_event->evt.asmt.rhs.ival; | 
| 592 | have_sample_time = 1; | 
| 593 | return 1; | 
| 594 | break; | 
| 595 |  | 
| 596 | default: | 
| 597 | the_event->err_msg = | 
| 598 | strdup( "Global error. sampleTime unrecognized.\n" ); | 
| 599 | return 0; | 
| 600 | break; | 
| 601 | } | 
| 602 | break; | 
| 603 |  | 
| 604 | case G_STATUSTIME: | 
| 605 | switch( the_type ){ | 
| 606 |  | 
| 607 | case STRING: | 
| 608 | the_event->err_msg = | 
| 609 | strdup( "Global error. statusTime is not a double or int.\n" ); | 
| 610 | return 0; | 
| 611 | break; | 
| 612 |  | 
| 613 | case DOUBLE: | 
| 614 | status_time = the_event->evt.asmt.rhs.dval; | 
| 615 | have_status_time = 1; | 
| 616 | return 1; | 
| 617 | break; | 
| 618 |  | 
| 619 | case INT: | 
| 620 | status_time = (double)the_event->evt.asmt.rhs.ival; | 
| 621 | have_status_time = 1; | 
| 622 | return 1; | 
| 623 | break; | 
| 624 |  | 
| 625 | default: | 
| 626 | the_event->err_msg = | 
| 627 | strdup( "Global error. statusTime unrecognized.\n" ); | 
| 628 | return 0; | 
| 629 | break; | 
| 630 | } | 
| 631 | break; | 
| 632 |  | 
| 633 | case G_THERMALTIME: | 
| 634 | switch( the_type ){ | 
| 635 |  | 
| 636 | case STRING: | 
| 637 | the_event->err_msg = | 
| 638 | strdup( "Global error. thermalTime is not a double or int.\n" ); | 
| 639 | return 0; | 
| 640 | break; | 
| 641 |  | 
| 642 | case DOUBLE: | 
| 643 | thermal_time = the_event->evt.asmt.rhs.dval; | 
| 644 | have_thermal_time = 1; | 
| 645 | return 1; | 
| 646 | break; | 
| 647 |  | 
| 648 | case INT: | 
| 649 | thermal_time = (double)the_event->evt.asmt.rhs.ival; | 
| 650 | have_thermal_time = 1; | 
| 651 | return 1; | 
| 652 | break; | 
| 653 |  | 
| 654 | default: | 
| 655 | the_event->err_msg = | 
| 656 | strdup( "Global error. thermalTime unrecognized.\n" ); | 
| 657 | return 0; | 
| 658 | break; | 
| 659 | } | 
| 660 | break; | 
| 661 |  | 
| 662 | case G_ECR: | 
| 663 | switch( the_type ){ | 
| 664 |  | 
| 665 | case STRING: | 
| 666 | the_event->err_msg = | 
| 667 | strdup( "Global error. electrostaticCutoffRadius is not a double or int.\n" ); | 
| 668 | return 0; | 
| 669 | break; | 
| 670 |  | 
| 671 | case DOUBLE: | 
| 672 | ecr = the_event->evt.asmt.rhs.dval; | 
| 673 | have_ecr = 1; | 
| 674 | return 1; | 
| 675 | break; | 
| 676 |  | 
| 677 | case INT: | 
| 678 | ecr = (double)the_event->evt.asmt.rhs.ival; | 
| 679 | have_ecr = 1; | 
| 680 | return 1; | 
| 681 | break; | 
| 682 |  | 
| 683 | default: | 
| 684 | the_event->err_msg = | 
| 685 | strdup( "Global error. electrostaticCutoffRadius unrecognized.\n" ); | 
| 686 | return 0; | 
| 687 | break; | 
| 688 | } | 
| 689 | break; | 
| 690 |  | 
| 691 | case G_EST: | 
| 692 | switch( the_type ){ | 
| 693 |  | 
| 694 | case STRING: | 
| 695 | the_event->err_msg = | 
| 696 | strdup( "Global error. electrostaticSkinThickness is not a double or int.\n" ); | 
| 697 | return 0; | 
| 698 | break; | 
| 699 |  | 
| 700 | case DOUBLE: | 
| 701 | est = the_event->evt.asmt.rhs.dval; | 
| 702 | have_est = 1; | 
| 703 | return 1; | 
| 704 | break; | 
| 705 |  | 
| 706 | case INT: | 
| 707 | est = (double)the_event->evt.asmt.rhs.ival; | 
| 708 | have_est = 1; | 
| 709 | return 1; | 
| 710 | break; | 
| 711 |  | 
| 712 | default: | 
| 713 | the_event->err_msg = | 
| 714 | strdup( "Global error. electrostaticSkinThickness unrecognized.\n" ); | 
| 715 | return 0; | 
| 716 | break; | 
| 717 | } | 
| 718 | break; | 
| 719 |  | 
| 720 | case G_DIELECTRIC: | 
| 721 | switch( the_type ){ | 
| 722 |  | 
| 723 | case STRING: | 
| 724 | the_event->err_msg = | 
| 725 | strdup( "Global error. dielectric is not a double or int.\n" ); | 
| 726 | return 0; | 
| 727 | break; | 
| 728 |  | 
| 729 | case DOUBLE: | 
| 730 | dielectric = the_event->evt.asmt.rhs.dval; | 
| 731 | have_dielectric = 1; | 
| 732 | return 1; | 
| 733 | break; | 
| 734 |  | 
| 735 | case INT: | 
| 736 | dielectric = (double)the_event->evt.asmt.rhs.ival; | 
| 737 | have_dielectric = 1; | 
| 738 | return 1; | 
| 739 | break; | 
| 740 |  | 
| 741 | default: | 
| 742 | the_event->err_msg = | 
| 743 | strdup( "Global error. dielectric unrecognized.\n" ); | 
| 744 | return 0; | 
| 745 | break; | 
| 746 | } | 
| 747 | break; | 
| 748 |  | 
| 749 | case G_TEMPSET: | 
| 750 | if( the_type == STRING ){ | 
| 751 |  | 
| 752 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) tempSet = 1; | 
| 753 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) tempSet = 0; | 
| 754 | else{ | 
| 755 | the_event->err_msg = | 
| 756 | strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); | 
| 757 | return 0; | 
| 758 | } | 
| 759 | have_tempSet = 1; | 
| 760 | return 1; | 
| 761 | } | 
| 762 |  | 
| 763 | the_event->err_msg = | 
| 764 | strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); | 
| 765 | return 0; | 
| 766 | break; | 
| 767 |  | 
| 768 | case G_USEPBC: | 
| 769 | if( the_type == STRING ){ | 
| 770 |  | 
| 771 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) usePBC = 1; | 
| 772 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) usePBC = 0; | 
| 773 | else{ | 
| 774 | the_event->err_msg = | 
| 775 | strdup( "Global error. usePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); | 
| 776 | return 0; | 
| 777 | } | 
| 778 | return 1; | 
| 779 | } | 
| 780 |  | 
| 781 | the_event->err_msg = | 
| 782 | strdup( "Global error. usePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); | 
| 783 | return 0; | 
| 784 | break; | 
| 785 |  | 
| 786 | case G_USERF: | 
| 787 | if( the_type == STRING ){ | 
| 788 |  | 
| 789 | if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useRF = 1; | 
| 790 | else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useRF = 0; | 
| 791 | else{ | 
| 792 | the_event->err_msg = | 
| 793 | strdup( "Global error. useReactionField was not \"true\" or \"false\".\n" ); | 
| 794 | return 0; | 
| 795 | } | 
| 796 | return 1; | 
| 797 | } | 
| 798 |  | 
| 799 | the_event->err_msg = | 
| 800 | strdup( "Global error. useReactionField was not \"true\" or \"false\".\n" ); | 
| 801 | return 0; | 
| 802 | break; | 
| 803 |  | 
| 804 | case G_TARGETPRESSURE: | 
| 805 | switch( the_type ){ | 
| 806 |  | 
| 807 | case STRING: | 
| 808 | the_event->err_msg = | 
| 809 | strdup( "Global error. targetPressure is not a double or int.\n" ); | 
| 810 | return 0; | 
| 811 | break; | 
| 812 |  | 
| 813 | case DOUBLE: | 
| 814 | target_pressure = the_event->evt.asmt.rhs.dval; | 
| 815 | have_target_pressure = 1; | 
| 816 | return 1; | 
| 817 | break; | 
| 818 |  | 
| 819 | case INT: | 
| 820 | target_pressure = (double)the_event->evt.asmt.rhs.ival; | 
| 821 | have_target_pressure = 1; | 
| 822 | return 1; | 
| 823 | break; | 
| 824 |  | 
| 825 | default: | 
| 826 | the_event->err_msg = | 
| 827 | strdup( "Global error. targetPressure unrecognized.\n" ); | 
| 828 | return 0; | 
| 829 | break; | 
| 830 | } | 
| 831 | break; | 
| 832 |  | 
| 833 | case G_TAUTHERMOSTAT: | 
| 834 | switch( the_type ){ | 
| 835 |  | 
| 836 | case STRING: | 
| 837 | the_event->err_msg = | 
| 838 | strdup( "Global error. tauThermostat is not a double or int.\n" ); | 
| 839 | return 0; | 
| 840 | break; | 
| 841 |  | 
| 842 | case DOUBLE: | 
| 843 | tau_thermostat = the_event->evt.asmt.rhs.dval; | 
| 844 | have_tau_thermostat = 1; | 
| 845 | return 1; | 
| 846 | break; | 
| 847 |  | 
| 848 | case INT: | 
| 849 | tau_thermostat = (double)the_event->evt.asmt.rhs.ival; | 
| 850 | have_tau_thermostat = 1; | 
| 851 | return 1; | 
| 852 | break; | 
| 853 |  | 
| 854 | default: | 
| 855 | the_event->err_msg = | 
| 856 | strdup( "Global error. tauThermostat unrecognized.\n" ); | 
| 857 | return 0; | 
| 858 | break; | 
| 859 | } | 
| 860 | break; | 
| 861 |  | 
| 862 | case G_TAUBAROSTAT: | 
| 863 | switch( the_type ){ | 
| 864 |  | 
| 865 | case STRING: | 
| 866 | the_event->err_msg = | 
| 867 | strdup( "Global error. tauBarostat is not a double or int.\n" ); | 
| 868 | return 0; | 
| 869 | break; | 
| 870 |  | 
| 871 | case DOUBLE: | 
| 872 | tau_barostat = the_event->evt.asmt.rhs.dval; | 
| 873 | have_tau_barostat = 1; | 
| 874 | return 1; | 
| 875 | break; | 
| 876 |  | 
| 877 | case INT: | 
| 878 | tau_barostat = (double)the_event->evt.asmt.rhs.ival; | 
| 879 | have_tau_barostat = 1; | 
| 880 | return 1; | 
| 881 | break; | 
| 882 |  | 
| 883 | default: | 
| 884 | the_event->err_msg = | 
| 885 | strdup( "Global error. tauBarostat unrecognized.\n" ); | 
| 886 | return 0; | 
| 887 | break; | 
| 888 | } | 
| 889 | break; | 
| 890 |  | 
| 891 | case G_ZCONSTIME: | 
| 892 | switch( the_type ){ | 
| 893 |  | 
| 894 | case STRING: | 
| 895 | the_event->err_msg = | 
| 896 | strdup( "Global error. zcons_time is not a double or int.\n" ); | 
| 897 | return 0; | 
| 898 | break; | 
| 899 |  | 
| 900 | case DOUBLE: | 
| 901 | zcons_time = the_event->evt.asmt.rhs.dval; | 
| 902 | return 1; | 
| 903 | break; | 
| 904 |  | 
| 905 | case INT: | 
| 906 | zcons_time = (double)the_event->evt.asmt.rhs.ival; | 
| 907 | have_zcons_time = 1; | 
| 908 | return 1; | 
| 909 | break; | 
| 910 |  | 
| 911 | default: | 
| 912 | the_event->err_msg = | 
| 913 | strdup( "Global error. zcons_time unrecognized.\n" ); | 
| 914 | return 0; | 
| 915 | break; | 
| 916 | } | 
| 917 | break; | 
| 918 |  | 
| 919 | case G_ZCONSMOLINDEX: | 
| 920 | switch( the_type ){ | 
| 921 |  | 
| 922 | case STRING: | 
| 923 | the_event->err_msg = | 
| 924 | strdup( "Global error. zconsMolIndex is not a  int.\n" ); | 
| 925 | return 0; | 
| 926 | break; | 
| 927 |  | 
| 928 | case INT: | 
| 929 | zconsMolIndex.push_back(the_event->evt.asmt.rhs.ival); | 
| 930 | have_index_of_all_zcons_mols = 1; | 
| 931 | return 1; | 
| 932 | break; | 
| 933 |  | 
| 934 | default: | 
| 935 | the_event->err_msg = | 
| 936 | strdup( "Global error. zconsMolIndex unrecognized.\n" ); | 
| 937 | return 0; | 
| 938 | break; | 
| 939 | } | 
| 940 | break; | 
| 941 |  | 
| 942 | // add more token cases here. | 
| 943 |  | 
| 944 | } | 
| 945 | } | 
| 946 |  | 
| 947 | switch( the_type ){ | 
| 948 |  | 
| 949 | case STRING: | 
| 950 | sprintf( err, | 
| 951 | "Global error. Unrecognized assignment:\n" | 
| 952 | "\t-> %s = %s\n", | 
| 953 | lhs, the_event->evt.asmt.rhs.sval ); | 
| 954 | break; | 
| 955 |  | 
| 956 | case DOUBLE: | 
| 957 | sprintf( err, | 
| 958 | "Global error. Unrecognized assignment:\n" | 
| 959 | "\t-> %s = %lf\n", | 
| 960 | lhs, the_event->evt.asmt.rhs.dval ); | 
| 961 | break; | 
| 962 |  | 
| 963 | case INT: | 
| 964 | sprintf( err, | 
| 965 | "Global error. Unrecognized assignment:\n" | 
| 966 | "\t-> %s = %d\n", | 
| 967 | lhs, the_event->evt.asmt.rhs.ival ); | 
| 968 | break; | 
| 969 |  | 
| 970 | default: | 
| 971 | sprintf( err, | 
| 972 | "Global error. Unrecognized assignment:\n" | 
| 973 | "\t-> %s = ?\n", | 
| 974 | lhs ); | 
| 975 | break; | 
| 976 | } | 
| 977 |  | 
| 978 | the_event->err_msg = strdup( err ); | 
| 979 | return 0; | 
| 980 | } | 
| 981 |  | 
| 982 | char* Globals::checkMe( void ){ | 
| 983 |  | 
| 984 | char err[300]; | 
| 985 | short int have_err = 0; | 
| 986 |  | 
| 987 | strcpy( err, "Global error. The following are required:\n" ); | 
| 988 |  | 
| 989 | if( !have_force_field ){ | 
| 990 | strcat( err, "\t->forceField\n" ); | 
| 991 | have_err= 1; | 
| 992 | } | 
| 993 |  | 
| 994 | if( !have_n_components ){ | 
| 995 | strcat( err, "\t->nComponents\n" ); | 
| 996 | have_err= 1; | 
| 997 | } | 
| 998 |  | 
| 999 | if( !have_target_temp ){ | 
| 1000 | strcat( err, "\t->targetTemp\n" ); | 
| 1001 | have_err= 1; | 
| 1002 | } | 
| 1003 |  | 
| 1004 | if( !have_ensemble ){ | 
| 1005 | strcat( err, "\t->ensemble\n" ); | 
| 1006 | have_err= 1; | 
| 1007 | } | 
| 1008 |  | 
| 1009 | if( !have_dt ){ | 
| 1010 | strcat( err, "\t->dt\n" ); | 
| 1011 | have_err= 1; | 
| 1012 | } | 
| 1013 |  | 
| 1014 | if( !have_run_time ){ | 
| 1015 | strcat( err, "\t->runTime\n" ); | 
| 1016 | have_err= 1; | 
| 1017 | } | 
| 1018 |  | 
| 1019 | if( have_err ) return strdup( err ); | 
| 1020 |  | 
| 1021 | return NULL; | 
| 1022 | } | 
| 1023 |  | 
| 1024 | int Globals::globalEnd( event* the_event ){ | 
| 1025 |  | 
| 1026 | the_event->err_msg = checkMe(); | 
| 1027 | if( the_event->err_msg != NULL ) return 0; | 
| 1028 |  | 
| 1029 | return 1; | 
| 1030 | } | 
| 1031 |  | 
| 1032 | int Globals::hash( char* text ){ | 
| 1033 |  | 
| 1034 | register unsigned short int i = 0; // loop counter | 
| 1035 | int key = 0; // the hash key | 
| 1036 |  | 
| 1037 | while( text[i] != '\0' ){ | 
| 1038 |  | 
| 1039 | key = ( ( key << hash_shift ) + text[i] ) % hash_size; | 
| 1040 |  | 
| 1041 | i++; | 
| 1042 | } | 
| 1043 |  | 
| 1044 | if( key < 0 ){ | 
| 1045 |  | 
| 1046 | // if the key is less than zero, we've had an overflow error | 
| 1047 |  | 
| 1048 | sprintf( painCave.errMsg, | 
| 1049 | "There has been an overflow error in the Globals' hash key."); | 
| 1050 | painCave.isFatal = 1; | 
| 1051 | simError(); | 
| 1052 | #ifdef IS_MPI | 
| 1053 | if( painCave.isEventLoop ){ | 
| 1054 | if( worldRank == 0 ) mpiInterfaceExit(); | 
| 1055 | } | 
| 1056 | #endif //is_mpi | 
| 1057 | } | 
| 1058 |  | 
| 1059 | return key; | 
| 1060 | } | 
| 1061 |  | 
| 1062 | void Globals::addHash( char* text, int token ){ | 
| 1063 |  | 
| 1064 | int key; | 
| 1065 | LinkedCommand* the_element; | 
| 1066 |  | 
| 1067 | the_element = new LinkedCommand; | 
| 1068 | the_element->setValues( text, token ); | 
| 1069 |  | 
| 1070 | key = hash( text ); | 
| 1071 | the_element->setNext( command_table[key] ); | 
| 1072 | command_table[key] = the_element; | 
| 1073 | } |