modified the defaults for the system init time and system init state.
Changes for RigidBody dynamics
incorporate SMD into ZConstraint,it does not sound a good choice, next commit will seperate SMD and ZConstraint
ZConstraint now can support sequential moving. Refactorying is needed to support SMD in ZConstraint
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Single version of energy minimization for argon is working, need to add constraint
Add some lines into global.cpp to make it work with energy minimization
BASS changes to add RigidBodies and LJrcut
added the following parameters to BASS: * useInitialExtendedSystemState * orthoBoxTolerance * useIntiTime => useInitialTime
replace c++ header stuff with more portable c header stuff Also, mod file fixes and portability changes
added useInitTime to the BASS syntax. * useInitTime = false: sets the origin time to 0.0 regardless of the time stamp in the .init file * default=> useInitTime = true;
Changes to autoconf / configure method of configuring OOPSE
added resetTime to the Global namespace.
bug fixed in ghost bend class
Tested MPI version of Z-Constraint Method
harmonic potential & z-contraint method
debugging globals
added harmonical potential to z-constraint method
Added zConstraint into the BASS language syntax.
added z-constraint parameters to the globals
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Removed Qmass
Fixes for NPT / NVT
Fixes for NPT and NVT
Added targetPressure to BASS
electrostatic changes for dipole / RF separation
This commit was generated by cvs2svn to compensate for changes in r377, which included commits to RCS files with non-trunk default branches.
New OOPSE Tree
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