Changes for implementing Amber force field: Added Inversions and worked on BaseAtomTypes so that they'd function with the fortran side.
Changes required for Inversions and Base Atom types. This will break OOPSE badly for a few days or so...
Adding single precision capabilities to c++ side
replace grammar for numerical parsing
fix a nasty negative integer parsing problem by refining the grammar
End of the Link --> List Return of the Oject-Oriented replace yacc/lex parser with antlr parser
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