| 1 | gezelter | 1490 | #ifndef __MPISIMULATION__ | 
| 2 |  |  | #define __MPISIMULATION__ | 
| 3 |  |  |  | 
| 4 | tim | 1492 | #include "brains/SimInfo.hpp" | 
| 5 |  |  | #include "types/MakeStamps.hpp" | 
| 6 | gezelter | 1490 | #define __C | 
| 7 | tim | 1492 | #include "UseTheForce/mpiComponentPlan.h" | 
| 8 | gezelter | 1490 |  | 
| 9 | tim | 1492 | #include "UseTheForce/fortranWrapDefines.hpp" | 
| 10 | gezelter | 1490 |  | 
| 11 |  |  | class mpiSimulation{ | 
| 12 |  |  | public: | 
| 13 |  |  |  | 
| 14 |  |  | mpiSimulation(SimInfo* the_entryPlug); | 
| 15 |  |  | ~mpiSimulation(); | 
| 16 |  |  |  | 
| 17 |  |  | void divideLabor(); | 
| 18 |  |  |  | 
| 19 |  |  | int  getMyNode( void )         { return parallelData->myNode; } | 
| 20 |  |  | int  getNProcessors( void )    { return parallelData->nProcessors; } | 
| 21 |  |  | int  getNMolLocal( void )      { return parallelData->nMolLocal; } | 
| 22 |  |  | int  getNMolGlobal( void )     { return parallelData->nMolGlobal; } | 
| 23 |  |  | int  getNAtomsLocal( void )    { return parallelData->nAtomsLocal; } | 
| 24 |  |  | int  getNAtomsGlobal( void )   { return parallelData->nAtomsGlobal; } | 
| 25 |  |  | int  getNGroupsLocal( void )   { return parallelData->nGroupsLocal; } | 
| 26 |  |  | int  getNGroupsGlobal( void )  { return parallelData->nGroupsGlobal; } | 
| 27 |  |  | int* getAtomToProcMap( void )  { return AtomToProcMap; } | 
| 28 |  |  | int* getGroupToProcMap( void ) { return GroupToProcMap; } | 
| 29 |  |  | int* getMolToProcMap( void )   { return MolToProcMap; } | 
| 30 |  |  | int* getMolComponentType(void) { return MolComponentType; } | 
| 31 |  |  | vector<int> getGlobalAtomIndex(void) {return globalAtomIndex; } | 
| 32 |  |  | vector<int> getGlobalGroupIndex(void) {return globalGroupIndex; } | 
| 33 |  |  | vector<int> getGlobalMolIndex(void) {return globalMolIndex;} | 
| 34 |  |  | int getGlobalToLocalMol(int globalIndex) {return globalToLocalMol[globalIndex];} | 
| 35 |  |  | int getGlobalToLocalAtom(int globalIndex) {return globalToLocalAtom[globalIndex];} | 
| 36 |  |  | int getGlobalToLocalGroup(int globalIndex) {return globalToLocalGroup[globalIndex];} | 
| 37 |  |  |  | 
| 38 |  |  | // sets the internal function pointer to fortran. | 
| 39 |  |  |  | 
| 40 |  |  | void setInternal( setFortranMPI_TD fSetup){ | 
| 41 |  |  | setFsimParallel = fSetup; | 
| 42 |  |  | } | 
| 43 |  |  |  | 
| 44 |  |  |  | 
| 45 |  |  | // call at the begining and after load balancing | 
| 46 |  |  |  | 
| 47 |  |  | void mpiRefresh( void ); | 
| 48 |  |  |  | 
| 49 |  |  | protected: | 
| 50 |  |  | SimInfo* entryPlug; | 
| 51 |  |  | mpiSimData* parallelData; | 
| 52 |  |  | int *MolToProcMap; | 
| 53 |  |  | int *MolComponentType; | 
| 54 |  |  | int *AtomToProcMap; | 
| 55 |  |  | int *AtomType; | 
| 56 |  |  | int *GroupToProcMap; | 
| 57 |  |  | vector<int> globalAtomIndex; | 
| 58 |  |  | vector<int> globalMolIndex; | 
| 59 |  |  | vector<int> globalGroupIndex; | 
| 60 |  |  |  | 
| 61 |  |  | vector<int> globalToLocalMol; | 
| 62 |  |  | vector<int> globalToLocalAtom; | 
| 63 |  |  | vector<int> globalToLocalGroup; | 
| 64 |  |  |  | 
| 65 |  |  | // private function to initialize the fortran side of the simulation | 
| 66 |  |  | setFortranMPI_TD setFsimParallel; | 
| 67 |  |  |  | 
| 68 |  |  | // int *myIdents; // is needed by Cpp only. It tells the molecule which stamp it is. | 
| 69 |  |  |  | 
| 70 |  |  | }; | 
| 71 |  |  |  | 
| 72 |  |  |  | 
| 73 |  |  | /** | 
| 74 |  |  | The following pointer is the global declaration of the mpiSim | 
| 75 |  |  | object created when the mpiSimulation creation routine is | 
| 76 |  |  | called. Every one who includes the header file will then have | 
| 77 |  |  | access to all of the routines in mpiSimulation class. | 
| 78 |  |  | */ | 
| 79 |  |  |  | 
| 80 |  |  | extern mpiSimulation* mpiSim; | 
| 81 |  |  |  | 
| 82 |  |  | #endif |