[ViewVC] Log of: group/trunk/OOPSE-4/src/applications/oopse

Revision 3520 - Directory Listing - [select for diffs]
Modified Mon Sep 7 16:31:51 2009 UTC (16 years, 2 months ago) by cli2
Diff to previous 3446 , to selected 3404

Added new restraint infrastructure
Added MolecularRestraints
Added ObjectRestraints
Added RestraintStamp
Updated thermodynamic integration to use ObjectRestraints
Added Quaternion mathematics for twist swing decompositions
Significantly updated RestWriter and RestReader to use dump-like files
Added selections for x, y, and z coordinates of atoms
Removed monolithic Restraints class
Fixed a few bugs in gradients of Euler angles in DirectionalAtom and RigidBody
Added some rotational capabilities to prinicpalAxisCalculator

Revision 3446 - Directory Listing - [select for diffs]
Modified Wed Sep 10 19:51:45 2008 UTC (17 years, 2 months ago) by cli2
Diff to previous 3404

Inversion fixes and amber mostly working

Revision 3404 - Directory Listing - [selected]
Modified Mon Jun 2 02:42:50 2008 UTC (17 years, 5 months ago) by gezelter
Diff to previous 3388

Fixed a bug in BlockSnapshotManager.

Revision 3388 - Directory Listing - [select for diffs]
Modified Fri Apr 25 15:14:47 2008 UTC (17 years, 7 months ago) by gezelter
Diff to previous 2879 , to selected 3404

A bunch of minor changes to make MPI compilation faster than
the double compilation we do now...

Revision 2879 - Directory Listing - [select for diffs]
Modified Thu Jun 22 15:21:01 2006 UTC (19 years, 5 months ago) by chrisfen
Diff to previous 2560 , to selected 3404

MPI thermodynamic integration works now.

Revision 2560 - Directory Listing - [select for diffs]
Modified Thu Jan 12 21:16:50 2006 UTC (19 years, 10 months ago) by gezelter
Diff to previous 2469 , to selected 3404

fixed some version info and the copyright date

Revision 2469 - Directory Listing - [select for diffs]
Modified Fri Dec 2 15:38:03 2005 UTC (19 years, 11 months ago) by tim
Diff to previous 2403 , to selected 3404

End of the Link --> List
Return of the Oject-Oriented
replace yacc/lex parser with antlr parser

Revision 2403 - Directory Listing - [select for diffs]
Modified Tue Nov 1 19:13:23 2005 UTC (20 years ago) by chrisfen
Diff to previous 2390 , to selected 3404

nothing

Revision 2390 - Directory Listing - [select for diffs]
Modified Wed Oct 19 19:24:40 2005 UTC (20 years, 1 month ago) by chrisfen
Diff to previous 2364 , to selected 3404

Still had some globals toUpper problems - these changes should fix those...

Revision 2364 - Directory Listing - [select for diffs]
Modified Thu Oct 13 22:26:47 2005 UTC (20 years, 1 month ago) by tim
Diff to previous 2207 , to selected 3404

rewrite Globals

Revision 2207 - Directory Listing - [select for diffs]
Modified Fri Apr 15 22:40:33 2005 UTC (20 years, 7 months ago) by gezelter
Diff to previous 2206 , to selected 3404

fixed the spacing on the banner.  Vanity.

Revision 2206 - Directory Listing - [select for diffs]
Modified Fri Apr 15 22:22:30 2005 UTC (20 years, 7 months ago) by gezelter
Diff to previous 2204 , to selected 3404

Version string in banner (and version numbers in config.h)

Revision 2204 - Directory Listing - [select for diffs]
Modified Fri Apr 15 22:04:00 2005 UTC (20 years, 7 months ago) by gezelter
Diff to previous 2131 , to selected 3404

xemacs has been drafted to perform our indentation services

Revision 2131 - Directory Listing - [select for diffs]
Modified Tue Mar 22 16:38:37 2005 UTC (20 years, 8 months ago) by tim
Diff to previous 2051 , to selected 3404

avoid building parallel executable for dump2XYZ, simpleBuilder, staticProps and dynamicProps

Revision 2051 - Directory Listing - [select for diffs]
Modified Fri Feb 18 15:58:33 2005 UTC (20 years, 9 months ago) by gezelter
Diff to previous 1951 , to selected 3404

Updated copyright information

Revision 1951 - Directory Listing - [select for diffs]
Modified Fri Jan 14 21:13:24 2005 UTC (20 years, 10 months ago) by gezelter
Diff to previous 1950 , to selected 3404

moved Package variable into subdirectory makefiles to speed up
the building process

Revision 1950 - Directory Listing - [select for diffs]
Modified Fri Jan 14 20:48:53 2005 UTC (20 years, 10 months ago) by gezelter
Diff to previous 1939 , to selected 3404

Fixed publication details in banner

Revision 1939 - Directory Listing - [select for diffs]
Modified Thu Jan 13 21:48:18 2005 UTC (20 years, 10 months ago) by gezelter
Diff to previous 1930 , to selected 3404

formatting

Revision 1930 - Directory Listing - [select for diffs]
Modified Wed Jan 12 22:41:40 2005 UTC (20 years, 10 months ago) by gezelter
Diff to previous 1513 , to selected 3404

merging new_design branch into OOPSE-2.0

Revision 1513 - Directory Listing - [select for diffs]
Modified Wed Sep 29 21:55:03 2004 UTC (21 years, 2 months ago) by tim
Diff to previous 1503 , to selected 3404

define DEV_ROOT as relative path

Revision 1503 - Directory Listing - [select for diffs]
Modified Wed Sep 29 14:59:25 2004 UTC (21 years, 2 months ago) by tim
Diff to previous 1501 , to selected 3404

change Makefile to relative path

Revision 1501 - Directory Listing - [select for diffs]
Added Tue Sep 28 23:24:25 2004 UTC (21 years, 2 months ago) by tim
Diff to selected 3404

change directory structure of application. Every executable file is replaced in seperate directory

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