applications/nanoRodBuilder/nanorodBuilderCmd.c

/*
  File autogenerated by gengetopt version 2.13
  generated with the following command:
  gengetopt -u --file-name=nanorodBuilderCmd 

  The developers of gengetopt consider the fixed text that goes in all
  gengetopt output files to be in the public domain:
  we make no copyright claims on it.
*/

/* If we use autoconf.  */
#ifdef HAVE_CONFIG_H
#include "config.h"
#endif

#include <stdio.h>
#include <stdlib.h>
#include <string.h>

#include "getopt.h"

#include "nanorodBuilderCmd.h"

static
void clear_given (struct gengetopt_args_info *args_info);
static
void clear_args (struct gengetopt_args_info *args_info);

static int
cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error);

static int
cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error);

static char *
gengetopt_strdup (const char *s);

static
void clear_given (struct gengetopt_args_info *args_info)
{
  args_info->help_given = 0 ;
  args_info->version_given = 0 ;
  args_info->output_given = 0 ;
  args_info->latticetype_given = 0 ;
  args_info->length_given = 0 ;
  args_info->width_given = 0 ;
  args_info->latticeCnst_given = 0 ;
  args_info->genGeomview_given = 0 ;
  args_info->twinnedCrystal_given = 0 ;
}

static
void clear_args (struct gengetopt_args_info *args_info)
{
  args_info->output_arg = NULL;
  args_info->latticetype_arg = gengetopt_strdup ("fcc");
  args_info->genGeomview_flag = 0;
  args_info->twinnedCrystal_flag = 0;
}

void
cmdline_parser_print_version (void)
{
  printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION);
}

void
cmdline_parser_print_help (void)
{
  cmdline_parser_print_version ();
  printf("\n%s\n", "Builds penta-hexagonal nanorods and outputs a xyz input file");
  printf("\nUsage: nanorodBuilder [OPTIONS]... [FILES]...\n\n");
  printf("%s\n","  -h, --help                Print help and exit");
  printf("%s\n","  -V, --version             Print version and exit");
  printf("%s\n","  -o, --output=STRING       Output file name");
  printf("%s\n","      --latticetype=STRING  Lattice type string. Valid types are fcc,hcp,bcc.  \n                              (default=`fcc')");
  printf("%s\n","      --length=DOUBLE       length of nanorod in Angstroms");
  printf("%s\n","      --width=DOUBLE        diameter  of nanorod in Angstroms");
  printf("%s\n","      --latticeCnst=DOUBLE  lattice spacing in Angstrons for cubic lattice");
  printf("%s\n","      --genGeomview         generate a geomview file with the object geometry  \n                              (default=off)");
  printf("%s\n","      --twinnedCrystal      generate a twinned crystal nanorod  (default=off)");
  
}

void
cmdline_parser_init (struct gengetopt_args_info *args_info)
{
  clear_given (args_info);
  clear_args (args_info);

  args_info->inputs = NULL;
  args_info->inputs_num = 0;
}

void
cmdline_parser_free (struct gengetopt_args_info *args_info)
{
  
  unsigned int i;
  if (args_info->output_arg)
    {
      free (args_info->output_arg); /* free previous argument */
      args_info->output_arg = 0;
    }
  if (args_info->latticetype_arg)
    {
      free (args_info->latticetype_arg); /* free previous argument */
      args_info->latticetype_arg = 0;
    }
  
  for (i = 0; i < args_info->inputs_num; ++i)
    free (args_info->inputs [i]);
  
  if (args_info->inputs_num)
    free (args_info->inputs);
  
  clear_given (args_info);
}

/* gengetopt_strdup() */
/* strdup.c replacement of strdup, which is not standard */
char *
gengetopt_strdup (const char *s)
{
  char *result = NULL;
  if (!s)
    return result;

  result = (char*)malloc(strlen(s) + 1);
  if (result == (char*)0)
    return (char*)0;
  strcpy(result, s);
  return result;
}

int
cmdline_parser (int argc, char * const *argv, struct gengetopt_args_info *args_info)
{
  return cmdline_parser2 (argc, argv, args_info, 0, 1, 1);
}

int
cmdline_parser2 (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required)
{
  int result;

  result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL);

  if (result == EXIT_FAILURE)
    {
      cmdline_parser_free (args_info);
      exit (EXIT_FAILURE);
    }
  
  return result;
}

int
cmdline_parser_required (struct gengetopt_args_info *args_info, const char *prog_name)
{
  int result = EXIT_SUCCESS;

  if (cmdline_parser_required2(args_info, prog_name, NULL) > 0)
    result = EXIT_FAILURE;

  if (result == EXIT_FAILURE)
    {
      cmdline_parser_free (args_info);
      exit (EXIT_FAILURE);
    }
  
  return result;
}

int
cmdline_parser_required2 (struct gengetopt_args_info *args_info, const char *prog_name, const char *additional_error)
{
  int error = 0;

  if (! args_info->length_given)
    {
      fprintf (stderr, "%s: '--length' option required%s\n", prog_name, (additional_error ? additional_error : ""));
      error = 1;
    }
  if (! args_info->width_given)
    {
      fprintf (stderr, "%s: '--width' option required%s\n", prog_name, (additional_error ? additional_error : ""));
      error = 1;
    }
  if (! args_info->latticeCnst_given)
    {
      fprintf (stderr, "%s: '--latticeCnst' option required%s\n", prog_name, (additional_error ? additional_error : ""));
      error = 1;
    }

  return error;
}

int
cmdline_parser_internal (int argc, char * const *argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required, const char *additional_error)
{
  int c;        /* Character of the parsed option.  */

  int error = 0;
  struct gengetopt_args_info local_args_info;

  if (initialize)
    cmdline_parser_init (args_info);

  cmdline_parser_init (&local_args_info);

  optarg = 0;
  optind = 1;
  opterr = 1;
  optopt = '?';

  while (1)
    {
      int option_index = 0;
      char *stop_char;

      static struct option long_options[] = {
        { "help",       0, NULL, 'h' },
        { "version",    0, NULL, 'V' },
        { "output",     1, NULL, 'o' },
        { "latticetype",        1, NULL, 0 },
        { "length",     1, NULL, 0 },
        { "width",      1, NULL, 0 },
        { "latticeCnst",        1, NULL, 0 },
        { "genGeomview",        0, NULL, 0 },
        { "twinnedCrystal",     0, NULL, 0 },
        { NULL, 0, NULL, 0 }
      };

      stop_char = 0;
      c = getopt_long (argc, argv, "hVo:", long_options, &option_index);

      if (c == -1) break;       /* Exit from `while (1)' loop.  */

      switch (c)
        {
        case 'h':       /* Print help and exit.  */
          cmdline_parser_print_help ();
          exit (EXIT_SUCCESS);

        case 'V':       /* Print version and exit.  */
          cmdline_parser_print_version ();
          exit (EXIT_SUCCESS);

        case 'o':       /* Output file name.  */
          if (local_args_info.output_given)
            {
              fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
              goto failure;
            }
          if (args_info->output_given && ! override)
            continue;
          local_args_info.output_given = 1;
          args_info->output_given = 1;
          if (args_info->output_arg)
            free (args_info->output_arg); /* free previous string */
          args_info->output_arg = gengetopt_strdup (optarg);
          break;


        case 0: /* Long option with no short option */
          /* Lattice type string. Valid types are fcc,hcp,bcc..  */
          if (strcmp (long_options[option_index].name, "latticetype") == 0)
          {
            if (local_args_info.latticetype_given)
              {
                fprintf (stderr, "%s: `--latticetype' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
                goto failure;
              }
            if (args_info->latticetype_given && ! override)
              continue;
            local_args_info.latticetype_given = 1;
            args_info->latticetype_given = 1;
            if (args_info->latticetype_arg)
              free (args_info->latticetype_arg); /* free previous string */
            args_info->latticetype_arg = gengetopt_strdup (optarg);
          }
          /* length of nanorod in Angstroms.  */
          else if (strcmp (long_options[option_index].name, "length") == 0)
          {
            if (local_args_info.length_given)
              {
                fprintf (stderr, "%s: `--length' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
                goto failure;
              }
            if (args_info->length_given && ! override)
              continue;
            local_args_info.length_given = 1;
            args_info->length_given = 1;
            args_info->length_arg = strtod (optarg, NULL);
          }
          /* diameter  of nanorod in Angstroms.  */
          else if (strcmp (long_options[option_index].name, "width") == 0)
          {
            if (local_args_info.width_given)
              {
                fprintf (stderr, "%s: `--width' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
                goto failure;
              }
            if (args_info->width_given && ! override)
              continue;
            local_args_info.width_given = 1;
            args_info->width_given = 1;
            args_info->width_arg = strtod (optarg, NULL);
          }
          /* lattice spacing in Angstrons for cubic lattice.  */
          else if (strcmp (long_options[option_index].name, "latticeCnst") == 0)
          {
            if (local_args_info.latticeCnst_given)
              {
                fprintf (stderr, "%s: `--latticeCnst' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
                goto failure;
              }
            if (args_info->latticeCnst_given && ! override)
              continue;
            local_args_info.latticeCnst_given = 1;
            args_info->latticeCnst_given = 1;
            args_info->latticeCnst_arg = strtod (optarg, NULL);
          }
          /* generate a geomview file with the object geometry.  */
          else if (strcmp (long_options[option_index].name, "genGeomview") == 0)
          {
            if (local_args_info.genGeomview_given)
              {
                fprintf (stderr, "%s: `--genGeomview' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
                goto failure;
              }
            if (args_info->genGeomview_given && ! override)
              continue;
            local_args_info.genGeomview_given = 1;
            args_info->genGeomview_given = 1;
            args_info->genGeomview_flag = !(args_info->genGeomview_flag);
          }
          /* generate a twinned crystal nanorod.  */
          else if (strcmp (long_options[option_index].name, "twinnedCrystal") == 0)
          {
            if (local_args_info.twinnedCrystal_given)
              {
                fprintf (stderr, "%s: `--twinnedCrystal' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
                goto failure;
              }
            if (args_info->twinnedCrystal_given && ! override)
              continue;
            local_args_info.twinnedCrystal_given = 1;
            args_info->twinnedCrystal_given = 1;
            args_info->twinnedCrystal_flag = !(args_info->twinnedCrystal_flag);
          }
          
          break;
        case '?':       /* Invalid option.  */
          /* `getopt_long' already printed an error message.  */
          goto failure;

        default:        /* bug: option not considered.  */
          fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : ""));
          abort ();
        } /* switch */
    } /* while */


  if (check_required)
    {
      error += cmdline_parser_required2 (args_info, argv[0], additional_error);
    }

  cmdline_parser_free (&local_args_info);

  if ( error )
    return (EXIT_FAILURE);

  if (optind < argc)
    {
      int i = 0 ;

      args_info->inputs_num = argc - optind ;
      args_info->inputs =
        (char **)(malloc ((args_info->inputs_num)*sizeof(char *))) ;
      while (optind < argc)
        args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind++]) ;
    }

  return 0;

failure:
  
  cmdline_parser_free (&local_args_info);
  return (EXIT_FAILURE);
}
Revision:	2218
Committed:	Tue May 3 17:55:28 2005 UTC (20 years, 6 months ago) by chuckv
Content type:	text/plain
File size:	12552 byte(s)
Log Message:	More changes to nanoRodBuilder....
#	User	Rev	Content
1	chuckv	2164	/*
2	chuckv	2215	File autogenerated by gengetopt version 2.13
3	chuckv	2164	generated with the following command:
4			gengetopt -u --file-name=nanorodBuilderCmd
5
6			The developers of gengetopt consider the fixed text that goes in all
7			gengetopt output files to be in the public domain:
8			we make no copyright claims on it.
9			*/
10
11			/* If we use autoconf. */
12			#ifdef HAVE_CONFIG_H
13			#include "config.h"
14			#endif
15
16			#include <stdio.h>
17			#include <stdlib.h>
18			#include <string.h>
19
20			#include "getopt.h"
21
22			#include "nanorodBuilderCmd.h"
23
24			static
25			void clear_given (struct gengetopt_args_info *args_info);
26			static
27			void clear_args (struct gengetopt_args_info *args_info);
28
29			static int
30			cmdline_parser_internal (int argc, char * const argv, struct gengetopt_args_info args_info, int override, int initialize, int check_required, const char *additional_error);
31
32	chuckv	2215	static int
33			cmdline_parser_required2 (struct gengetopt_args_info args_info, const char prog_name, const char *additional_error);
34
35	chuckv	2164	static char *
36			gengetopt_strdup (const char *s);
37
38			static
39			void clear_given (struct gengetopt_args_info *args_info)
40			{
41			args_info->help_given = 0 ;
42			args_info->version_given = 0 ;
43			args_info->output_given = 0 ;
44			args_info->latticetype_given = 0 ;
45			args_info->length_given = 0 ;
46			args_info->width_given = 0 ;
47			args_info->latticeCnst_given = 0 ;
48			args_info->genGeomview_given = 0 ;
49	chuckv	2218	args_info->twinnedCrystal_given = 0 ;
50	chuckv	2164	}
51
52			static
53			void clear_args (struct gengetopt_args_info *args_info)
54			{
55			args_info->output_arg = NULL;
56			args_info->latticetype_arg = gengetopt_strdup ("fcc");
57	chuckv	2215	args_info->genGeomview_flag = 0;
58	chuckv	2218	args_info->twinnedCrystal_flag = 0;
59	chuckv	2164	}
60
61			void
62			cmdline_parser_print_version (void)
63			{
64			printf ("%s %s\n", CMDLINE_PARSER_PACKAGE, CMDLINE_PARSER_VERSION);
65			}
66
67			void
68			cmdline_parser_print_help (void)
69			{
70			cmdline_parser_print_version ();
71	chuckv	2215	printf("\n%s\n", "Builds penta-hexagonal nanorods and outputs a xyz input file");
72			printf("\nUsage: nanorodBuilder [OPTIONS]... [FILES]...\n\n");
73	chuckv	2164	printf("%s\n"," -h, --help Print help and exit");
74			printf("%s\n"," -V, --version Print version and exit");
75			printf("%s\n"," -o, --output=STRING Output file name");
76			printf("%s\n"," --latticetype=STRING Lattice type string. Valid types are fcc,hcp,bcc. \n (default=`fcc')");
77			printf("%s\n"," --length=DOUBLE length of nanorod in Angstroms");
78			printf("%s\n"," --width=DOUBLE diameter of nanorod in Angstroms");
79			printf("%s\n"," --latticeCnst=DOUBLE lattice spacing in Angstrons for cubic lattice");
80	chuckv	2215	printf("%s\n"," --genGeomview generate a geomview file with the object geometry \n (default=off)");
81	chuckv	2218	printf("%s\n"," --twinnedCrystal generate a twinned crystal nanorod (default=off)");
82	chuckv	2215
83	chuckv	2164	}
84
85			void
86			cmdline_parser_init (struct gengetopt_args_info *args_info)
87			{
88			clear_given (args_info);
89			clear_args (args_info);
90
91			args_info->inputs = NULL;
92			args_info->inputs_num = 0;
93			}
94
95			void
96			cmdline_parser_free (struct gengetopt_args_info *args_info)
97			{
98
99	chuckv	2215	unsigned int i;
100	chuckv	2164	if (args_info->output_arg)
101			{
102			free (args_info->output_arg); /* free previous argument */
103			args_info->output_arg = 0;
104			}
105			if (args_info->latticetype_arg)
106			{
107			free (args_info->latticetype_arg); /* free previous argument */
108			args_info->latticetype_arg = 0;
109			}
110
111			for (i = 0; i < args_info->inputs_num; ++i)
112			free (args_info->inputs [i]);
113
114			if (args_info->inputs_num)
115			free (args_info->inputs);
116
117			clear_given (args_info);
118			}
119
120			/* gengetopt_strdup() */
121			/* strdup.c replacement of strdup, which is not standard */
122			char *
123			gengetopt_strdup (const char *s)
124			{
125			char *result = NULL;
126			if (!s)
127			return result;
128
129			result = (char*)malloc(strlen(s) + 1);
130			if (result == (char*)0)
131			return (char*)0;
132			strcpy(result, s);
133			return result;
134			}
135
136			int
137			cmdline_parser (int argc, char * const argv, struct gengetopt_args_info args_info)
138			{
139	chuckv	2215	return cmdline_parser2 (argc, argv, args_info, 0, 1, 1);
140	chuckv	2164	}
141
142			int
143	chuckv	2215	cmdline_parser2 (int argc, char * const argv, struct gengetopt_args_info args_info, int override, int initialize, int check_required)
144	chuckv	2164	{
145			int result;
146	chuckv	2215
147			result = cmdline_parser_internal (argc, argv, args_info, override, initialize, check_required, NULL);
148
149			if (result == EXIT_FAILURE)
150			{
151			cmdline_parser_free (args_info);
152			exit (EXIT_FAILURE);
153			}
154	chuckv	2164
155	chuckv	2215	return result;
156			}
157
158			int
159			cmdline_parser_required (struct gengetopt_args_info args_info, const char prog_name)
160			{
161			int result = EXIT_SUCCESS;
162
163			if (cmdline_parser_required2(args_info, prog_name, NULL) > 0)
164			result = EXIT_FAILURE;
165
166	chuckv	2164	if (result == EXIT_FAILURE)
167			{
168			cmdline_parser_free (args_info);
169			exit (EXIT_FAILURE);
170			}
171
172			return result;
173			}
174
175			int
176	chuckv	2215	cmdline_parser_required2 (struct gengetopt_args_info args_info, const char prog_name, const char *additional_error)
177			{
178			int error = 0;
179
180			if (! args_info->length_given)
181			{
182			fprintf (stderr, "%s: '--length' option required%s\n", prog_name, (additional_error ? additional_error : ""));
183			error = 1;
184			}
185			if (! args_info->width_given)
186			{
187			fprintf (stderr, "%s: '--width' option required%s\n", prog_name, (additional_error ? additional_error : ""));
188			error = 1;
189			}
190			if (! args_info->latticeCnst_given)
191			{
192			fprintf (stderr, "%s: '--latticeCnst' option required%s\n", prog_name, (additional_error ? additional_error : ""));
193			error = 1;
194			}
195
196			return error;
197			}
198
199			int
200	chuckv	2164	cmdline_parser_internal (int argc, char * const argv, struct gengetopt_args_info args_info, int override, int initialize, int check_required, const char *additional_error)
201			{
202			int c; /* Character of the parsed option. */
203	chuckv	2215
204	chuckv	2164	int error = 0;
205			struct gengetopt_args_info local_args_info;
206
207			if (initialize)
208			cmdline_parser_init (args_info);
209
210			cmdline_parser_init (&local_args_info);
211
212			optarg = 0;
213			optind = 1;
214			opterr = 1;
215			optopt = '?';
216
217			while (1)
218			{
219			int option_index = 0;
220			char *stop_char;
221
222			static struct option long_options[] = {
223			{ "help", 0, NULL, 'h' },
224			{ "version", 0, NULL, 'V' },
225			{ "output", 1, NULL, 'o' },
226			{ "latticetype", 1, NULL, 0 },
227			{ "length", 1, NULL, 0 },
228			{ "width", 1, NULL, 0 },
229			{ "latticeCnst", 1, NULL, 0 },
230	chuckv	2215	{ "genGeomview", 0, NULL, 0 },
231	chuckv	2218	{ "twinnedCrystal", 0, NULL, 0 },
232	chuckv	2164	{ NULL, 0, NULL, 0 }
233			};
234
235			stop_char = 0;
236			c = getopt_long (argc, argv, "hVo:", long_options, &option_index);
237
238			if (c == -1) break; /* Exit from `while (1)' loop. */
239
240			switch (c)
241			{
242			case 'h': /* Print help and exit. */
243			cmdline_parser_print_help ();
244			exit (EXIT_SUCCESS);
245
246			case 'V': /* Print version and exit. */
247			cmdline_parser_print_version ();
248			exit (EXIT_SUCCESS);
249
250			case 'o': /* Output file name. */
251			if (local_args_info.output_given)
252			{
253	chuckv	2215	fprintf (stderr, "%s: `--output' (`-o') option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
254	chuckv	2164	goto failure;
255			}
256			if (args_info->output_given && ! override)
257			continue;
258			local_args_info.output_given = 1;
259			args_info->output_given = 1;
260			if (args_info->output_arg)
261			free (args_info->output_arg); /* free previous string */
262			args_info->output_arg = gengetopt_strdup (optarg);
263			break;
264
265
266			case 0: /* Long option with no short option */
267			/* Lattice type string. Valid types are fcc,hcp,bcc.. */
268			if (strcmp (long_options[option_index].name, "latticetype") == 0)
269	chuckv	2215	{
270			if (local_args_info.latticetype_given)
271			{
272			fprintf (stderr, "%s: `--latticetype' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
273			goto failure;
274			}
275			if (args_info->latticetype_given && ! override)
276			continue;
277			local_args_info.latticetype_given = 1;
278			args_info->latticetype_given = 1;
279			if (args_info->latticetype_arg)
280			free (args_info->latticetype_arg); /* free previous string */
281			args_info->latticetype_arg = gengetopt_strdup (optarg);
282			}
283	chuckv	2164	/* length of nanorod in Angstroms. */
284			else if (strcmp (long_options[option_index].name, "length") == 0)
285	chuckv	2215	{
286			if (local_args_info.length_given)
287			{
288			fprintf (stderr, "%s: `--length' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
289			goto failure;
290			}
291			if (args_info->length_given && ! override)
292			continue;
293			local_args_info.length_given = 1;
294			args_info->length_given = 1;
295			args_info->length_arg = strtod (optarg, NULL);
296			}
297	chuckv	2164	/* diameter of nanorod in Angstroms. */
298			else if (strcmp (long_options[option_index].name, "width") == 0)
299	chuckv	2215	{
300			if (local_args_info.width_given)
301			{
302			fprintf (stderr, "%s: `--width' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
303			goto failure;
304			}
305			if (args_info->width_given && ! override)
306			continue;
307			local_args_info.width_given = 1;
308			args_info->width_given = 1;
309			args_info->width_arg = strtod (optarg, NULL);
310			}
311	chuckv	2164	/* lattice spacing in Angstrons for cubic lattice. */
312			else if (strcmp (long_options[option_index].name, "latticeCnst") == 0)
313	chuckv	2215	{
314			if (local_args_info.latticeCnst_given)
315			{
316			fprintf (stderr, "%s: `--latticeCnst' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
317			goto failure;
318			}
319			if (args_info->latticeCnst_given && ! override)
320			continue;
321			local_args_info.latticeCnst_given = 1;
322			args_info->latticeCnst_given = 1;
323			args_info->latticeCnst_arg = strtod (optarg, NULL);
324			}
325	chuckv	2164	/* generate a geomview file with the object geometry. */
326			else if (strcmp (long_options[option_index].name, "genGeomview") == 0)
327	chuckv	2215	{
328			if (local_args_info.genGeomview_given)
329			{
330			fprintf (stderr, "%s: `--genGeomview' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
331			goto failure;
332			}
333			if (args_info->genGeomview_given && ! override)
334			continue;
335			local_args_info.genGeomview_given = 1;
336			args_info->genGeomview_given = 1;
337			args_info->genGeomview_flag = !(args_info->genGeomview_flag);
338			}
339	chuckv	2218	/* generate a twinned crystal nanorod. */
340			else if (strcmp (long_options[option_index].name, "twinnedCrystal") == 0)
341			{
342			if (local_args_info.twinnedCrystal_given)
343			{
344			fprintf (stderr, "%s: `--twinnedCrystal' option given more than once%s\n", argv[0], (additional_error ? additional_error : ""));
345			goto failure;
346			}
347			if (args_info->twinnedCrystal_given && ! override)
348			continue;
349			local_args_info.twinnedCrystal_given = 1;
350			args_info->twinnedCrystal_given = 1;
351			args_info->twinnedCrystal_flag = !(args_info->twinnedCrystal_flag);
352			}
353	chuckv	2164
354			break;
355			case '?': /* Invalid option. */
356			/* `getopt_long' already printed an error message. */
357			goto failure;
358
359			default: /* bug: option not considered. */
360			fprintf (stderr, "%s: option unknown: %c%s\n", CMDLINE_PARSER_PACKAGE, c, (additional_error ? additional_error : ""));
361			abort ();
362			} /* switch */
363			} /* while */
364
365
366
367			if (check_required)
368			{
369	chuckv	2215	error += cmdline_parser_required2 (args_info, argv[0], additional_error);
370	chuckv	2164	}
371
372	chuckv	2215	cmdline_parser_free (&local_args_info);
373	chuckv	2164
374			if ( error )
375			return (EXIT_FAILURE);
376
377			if (optind < argc)
378			{
379			int i = 0 ;
380	chuckv	2215
381	chuckv	2164	args_info->inputs_num = argc - optind ;
382	chuckv	2215	args_info->inputs =
383	chuckv	2164	(char *)(malloc ((args_info->inputs_num)sizeof(char *))) ;
384			while (optind < argc)
385	chuckv	2215	args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind++]) ;
386	chuckv	2164	}
387	chuckv	2215
388	chuckv	2164	return 0;
389
390	chuckv	2215	failure:
391
392	chuckv	2164	cmdline_parser_free (&local_args_info);
393			return (EXIT_FAILURE);
394			}