| 1 | ##################################################### | 
| 2 | # Makefile for Oopse Utility Codes                  # | 
| 3 | ##################################################### | 
| 4 | # You should not change anything here.              # | 
| 5 | ##################################################### | 
| 6 |  | 
| 7 | TOP=../../ | 
| 8 |  | 
| 9 | .SUFFIXES : .cpp .c $(O) | 
| 10 |  | 
| 11 | # Extension of object files | 
| 12 | O=@OBJEXT@ | 
| 13 |  | 
| 14 | # Extension of executables | 
| 15 | EXE=@EXEEXT@ | 
| 16 |  | 
| 17 | # Bourn shell | 
| 18 | SHELL=/bin/sh | 
| 19 |  | 
| 20 | # Path prefix for installation links | 
| 21 | PREFIX=@prefix@ | 
| 22 |  | 
| 23 | # List of subdirectories | 
| 24 | SUBDIRS=@SUBDIRS@ | 
| 25 |  | 
| 26 | # Location of the oopse home | 
| 27 | OOPSE_HOME=@OOPSE_HOME@ | 
| 28 |  | 
| 29 | FORCE_PARAM_DIR=@OOPSE_HOME@/share/forceFields/ | 
| 30 | SAMPLE_SIM_DIR=@OOPSE_HOME@/share/samples/ | 
| 31 |  | 
| 32 | # SPRNG library path | 
| 33 | SPRNG_LIB_DIR=@SPRNG_LIB_DIR@ | 
| 34 |  | 
| 35 | # SPRNG library | 
| 36 | SPRNG_LIB=@SPRNG_LIB@ | 
| 37 |  | 
| 38 | # SPRNG include path | 
| 39 | SPRNG_INC=@SPRNG_INC@ | 
| 40 |  | 
| 41 | # MPICH library path | 
| 42 | MPI_LIBDIR=@MPI_LIBDIR@ | 
| 43 |  | 
| 44 | # MPICH library | 
| 45 | MPI_LIB=@MPI_LIB@ | 
| 46 |  | 
| 47 | # MPICH include path | 
| 48 | MPI_INC=@MPI_INC@ | 
| 49 |  | 
| 50 | # MPI F90 Module path | 
| 51 | MPI_F90_MODS=@MPI_F90_MODS@ | 
| 52 |  | 
| 53 | # Compiler dependent Fortran module | 
| 54 | F90LIBS = @F90LIBS@ | 
| 55 |  | 
| 56 | # Location of yacc (or its substitution) | 
| 57 | YACC=@YACC@ | 
| 58 |  | 
| 59 | #location of lex | 
| 60 | LEX=@LEX@ | 
| 61 |  | 
| 62 | # C compiler | 
| 63 | CC=@CC@ | 
| 64 |  | 
| 65 | # C++ compiler | 
| 66 |  | 
| 67 | CXX=@CXX@ | 
| 68 |  | 
| 69 | # F90 compiler | 
| 70 | F90=@F90@ | 
| 71 |  | 
| 72 | # ar | 
| 73 | AR=@AR@ | 
| 74 |  | 
| 75 | # ranlib | 
| 76 | RANLIB=@RANLIB@ | 
| 77 |  | 
| 78 | # rm | 
| 79 | RM=rm -f | 
| 80 |  | 
| 81 | # soft link | 
| 82 | LN_S=@LN_S@ | 
| 83 |  | 
| 84 | # BSD install | 
| 85 | INSTALL=@INSTALL@ | 
| 86 | INSTALL_PROGRAM=@INSTALL_PROGRAM@ | 
| 87 | INSTALL_DATA=@INSTALL_DATA@ | 
| 88 | MKINSTALLDIRS=@MKINSTALLDIRS@ | 
| 89 |  | 
| 90 | # CPP flags | 
| 91 | CPPFLAGS=@CPPFLAGS@ | 
| 92 |  | 
| 93 | # C flags | 
| 94 | CFLAGS_C=@CFLAGS@ | 
| 95 |  | 
| 96 | # C++ flags | 
| 97 | CXXFLAGS_C=@CXXFLAGS@ | 
| 98 |  | 
| 99 | # Preprocessor flag for fortran | 
| 100 | PREPFLAG=@PREPFLAG@ | 
| 101 |  | 
| 102 | # Preprocessor define flag for fortran | 
| 103 | PREPDEFFLAG=@PREPDEFFLAG@ | 
| 104 |  | 
| 105 | # Fortran flags | 
| 106 | FFLAGS_C=@F90FLAGS@ | 
| 107 |  | 
| 108 | # LDFLAGS | 
| 109 | LDFLAGS=@LDFLAGS@ | 
| 110 |  | 
| 111 | # LIBOBJS | 
| 112 | LIBOBJS=@LIBOBJS@ | 
| 113 |  | 
| 114 | MPI_DECLARES= -DIS_MPI | 
| 115 |  | 
| 116 | # include paths starting with "." are all relative to the SUBDIRS!!! | 
| 117 |  | 
| 118 | INCLUDES= -I.. -I$(TOP)/../libBASS -I$(TOP)/../libmdtools -I../.. | 
| 119 | CFLAGS=$(CFLAGS_C) $(INCLUDES) $(DECLARES) | 
| 120 | CXXFLAGS=$(CXXFLAGS_C) $(INCLUDES) $(DECLARES) | 
| 121 | DEPFLAGS=$(CFLAGS_C) -I. -I$(SPRNG_INC_DIR) -I$(TOP)/libBASS -I$(TOP)/libmdtools -I.. | 
| 122 |  | 
| 123 |  | 
| 124 | SYSBUILD=sysBuild$(EXE) | 
| 125 | BUILDER_LIB=libBuilder.a | 
| 126 | SIMPLEBUILD = simpleBuilder$(EXE) | 
| 127 | #LBILAYER=latticeBilayer$(EXE) | 
| 128 | #RBILAYER=randomBilayer$(EXE) | 
| 129 |  | 
| 130 | BASS_LIB=$(TOP)/libBASS/libBASS.a | 
| 131 | MD_LIB=$(TOP)/libmdtools/libmdtools.a | 
| 132 | LIBS=$(BASS_LIB) $(MD_LIB) | 
| 133 |  | 
| 134 | #SYSBUILD_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIB_DIR) | 
| 135 | #SYSBUILD_LDADD=-lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 136 |  | 
| 137 |  | 
| 138 | SRC_DIR := $(PWD) | 
| 139 |  | 
| 140 | #LBILAYER_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIB_DIR) -L$(SRC_DIR) | 
| 141 | #LBILAYER_LDADD=-L. -lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 142 |  | 
| 143 | #RBILAYER_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIB_DIR) -L$(SRC_DIR) | 
| 144 | #RBILAYER_LDADD=-L. -lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 145 |  | 
| 146 | SIMPLEBUILD_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIB_DIR) -L$(SRC_DIR) | 
| 147 | SIMPLEBUILD_LDADD=-L. -lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 148 |  | 
| 149 | PREFS=-DOOPSE_HOME=\"$(OOPSE_HOME)\" | 
| 150 |  | 
| 151 | obj/%.o: %.cpp | 
| 152 | cd obj; $(CXX) $(CXXFLAGS) -c ../$< | 
| 153 |  | 
| 154 | MPIobj/%.o: %.cpp | 
| 155 | cd MPIobj; $(CXX) $(MPI_CXXFLAGS) -c ../$< | 
| 156 |  | 
| 157 | obj/%.o: %.c | 
| 158 | cd obj; $(CC) $(CFLAGS) -c ../$< | 
| 159 |  | 
| 160 | MPIobj/%.o: %.c | 
| 161 | cd MPIobj; $(CC) $(MPI_CFLAGS) -c ../$< | 
| 162 |  | 
| 163 | # sysBuilder files | 
| 164 |  | 
| 165 | #SYSBUILD_C_FILES = $(DIR)/cmdline.c | 
| 166 | #SYSBUILD_CXX_FILES = \ | 
| 167 | #       $(DIR)/sysBuild.cpp \ | 
| 168 | #       $(DIR)/bilayerSys.cpp \ | 
| 169 | #       $(DIR)/MoLocator.cpp \ | 
| 170 | #       $(DIR)/latticeBuilder.cpp \ | 
| 171 | #       $(DIR)/nanoBuilder.cpp | 
| 172 |  | 
| 173 | #simpleBuilder files | 
| 174 | SIMPLEBUILD_C_FILES = $(DIR)/simpleBuilderCmd.c | 
| 175 | SIMPLEBUILD_CXX_FILES = \ | 
| 176 | $(DIR)/simpleBuilder.cpp | 
| 177 |  | 
| 178 |  | 
| 179 |  | 
| 180 | #latticeBilayer files | 
| 181 |  | 
| 182 | #LBILAYER_CXX_FILES = $(DIR)/latticeBilayer.cpp | 
| 183 |  | 
| 184 | #RBILAYER_CXX_FILES = $(DIR)/randomBilayer.cpp | 
| 185 |  | 
| 186 | # libBuilder files | 
| 187 |  | 
| 188 | BUILDER_LIB_CXX_FILES = \ | 
| 189 | $(DIR)/MoLocator.cpp \ | 
| 190 | $(DIR)/Lattice.cpp \ | 
| 191 | $(DIR)/BaseLattice.cpp \ | 
| 192 | $(DIR)/LatticeCreator.cpp \ | 
| 193 | $(DIR)/LatticeFactory.cpp | 
| 194 |  | 
| 195 |  | 
| 196 | # the sources | 
| 197 |  | 
| 198 | DIR:=. | 
| 199 |  | 
| 200 | #SYSBUILD_C_SRCS := $(SYSBUILD_C_FILES) | 
| 201 | #SYSBUILD_CXX_SRCS := $(SYSBUILD_CXX_FILES) | 
| 202 | #SYSBUILD_SRCS := $(SYSBUILD_C_SRCS) $(SYSBUILD_CXX_SRCS) | 
| 203 |  | 
| 204 | #LBILAYER_CXX_SRCS := $(LBILAYER_CXX_FILES) | 
| 205 | #LBILAYER_SRCS := $(LBILAYER_CXX_SRCS) | 
| 206 |  | 
| 207 | #RBILAYER_CXX_SRCS := $(RBILAYER_CXX_FILES) | 
| 208 | #RBILAYER_SRCS := $(RBILAYER_CXX_SRCS) | 
| 209 |  | 
| 210 | BUILDER_LIB_CXX_SRCS := $(BUILDER_LIB_CXX_FILES) | 
| 211 | BUILDER_LIB_SRCS := $(BUILDER_LIB_CXX_SRCS) | 
| 212 |  | 
| 213 | SIMPLEBUILD_C_SRCS := $(SIMPLEBUILD_C_FILES) | 
| 214 | SIMPLEBUILD_CXX_SRCS := $(SIMPLEBUILD_CXX_FILES) | 
| 215 | SIMPLEBUILD_SRCS := $(SIMPLEBUILD_C_FILES) $(SIMPLEBUILD_C_FILES) | 
| 216 |  | 
| 217 | C_CXX_SRCS :=  $(SIMPLEBUILD_SRCS) $(BUILDER_LIB_SRCS) | 
| 218 |  | 
| 219 | C_SRCS := | 
| 220 | CXX_SRCS := $(SIMPLEBUILD_CXX_SRCS) $(BUILDER_LIB_CXX_SRCS) | 
| 221 |  | 
| 222 | #the objects | 
| 223 |  | 
| 224 | DIR:=obj | 
| 225 | LIB_OBJS      := $(LIBOBJS:%.o=  ../$(DIR)/%.o) | 
| 226 |  | 
| 227 | BUILDER_LIB_CXX_OBJS := $(BUILDER_LIB_CXX_FILES:.cpp=.o) | 
| 228 | BUILDER_LIB_OBJS := $(BUILDER_LIB_CXX_OBJS) | 
| 229 |  | 
| 230 | SIMPLEBUILD_C_OBJS := $(SIMPLEBUILD_C_FILES:.c=.o) | 
| 231 | SIMPLEBUILD_CXX_OBJS := $(SIMPLEBUILD_CXX_FILES:.cpp=.o) | 
| 232 | SIMPLEBUILD_OBJS := $(SIMPLEBUILD_C_OBJS) $(SIMPLEBUILD_CXX_OBJS) | 
| 233 |  | 
| 234 | LIBSUBDIRS = \ | 
| 235 | obj | 
| 236 |  | 
| 237 | all : $(BUILDER_LIB) $(SIMPLEBUILD) $(RBILAYER) | 
| 238 |  | 
| 239 | depend: Make.dep | 
| 240 |  | 
| 241 |  | 
| 242 | libBuilder.a: $(BUILDER_LIB_OBJS) | 
| 243 | $(RM) $@ | 
| 244 | $(AR) cr $@ $(BUILDER_LIB_OBJS) | 
| 245 | $(RANLIB) $@ | 
| 246 |  | 
| 247 |  | 
| 248 | simpleBuilder$(EXE): $(SIMPLEBUILD_OBJS) $(BUILDER_LIB)  $(BASS_LIB) $(MD_LIB) $(LIB_OBJS) | 
| 249 | $(CXX) $(CXXFLAGS) $(SIMPLEBUILD_OBJS) $(BUILDER_LIB_OBJS) $(LIB_OBJS) -o $@ $(SIMPLEBUILD_LDFLAGS) $(SIMPLEBUILD_LDADD) | 
| 250 |  | 
| 251 |  | 
| 252 | install : $(SIMPLEBUILD) | 
| 253 | $(MKINSTALLDIRS) $(OOPSE_HOME)/bin | 
| 254 | $(INSTALL_PROGRAM) -s $(SIMPLEBUILD) $(OOPSE_HOME)/bin/$(SIMPLEBUILD) | 
| 255 |  | 
| 256 |  | 
| 257 | tests : dummy | 
| 258 |  | 
| 259 |  | 
| 260 | $(OOPSE_HOME)/bin/$(SIMPLEBUILD) : $(SIMPLEBUILD) | 
| 261 | $(MAKE) install | 
| 262 |  | 
| 263 | links : $(OOPSE_HOME)/bin/$(LBILAYER) | 
| 264 | $(MKINSTALLDIRS) $(PREFIX)/bin | 
| 265 | cd $(PREFIX)/bin; $(LN_S) -f $(OOPSE_HOME)/bin/$(SIMPLEBUILD) $(SIMPLEBUILD) | 
| 266 |  | 
| 267 | clean : dummy | 
| 268 | for i in $(LIBSUBDIRS); do \ | 
| 269 | (cd $$i; $(RM) *.o) || exit 1; \ | 
| 270 | done | 
| 271 | $(RM) $(SIMPLEBUILD) $(BUILDER_LIB) *.o *~ Make.temp | 
| 272 |  | 
| 273 | distclean : dummy | 
| 274 | for i in $(LIBSUBDIRS); do \ | 
| 275 | (cd $$i; $(RM) *.o) || exit 1; \ | 
| 276 | done | 
| 277 | $(RM) $(SIMPLEBUILD) $(BUILDER_LIB) *.o *~ Make.temp | 
| 278 |  | 
| 279 | devclean : distclean | 
| 280 |  | 
| 281 | Make.dep : | 
| 282 | echo "# DO NOT DELETE THIS LINE - used by make depend" > Make.dep | 
| 283 | $(CC) $(DEPFLAGS) -MM $(C_SRCS) \ | 
| 284 | | sed 's/\.o:/\$$(O)\ :/g' > Make.temp | 
| 285 | $(CXX) $(DEPFLAGS) -MM $(CXX_SRCS) \ | 
| 286 | | sed 's/\.o:/\$$(O)\ :/g' >> Make.temp | 
| 287 | cat Make.temp | sed 's/^[a-zA-Z0-9]/obj\/&/g' >> Make.dep | 
| 288 | cat Make.temp | sed 's/^[a-zA-Z0-9]/MPIobj\/&/g' >> Make.dep | 
| 289 | $(RM) Make.temp | 
| 290 |  | 
| 291 | tags : $(C_CXX_SRCS) | 
| 292 | ctags $(C_CXX_SRCS) | 
| 293 |  | 
| 294 | dummy : | 
| 295 |  | 
| 296 | # DO NOT DELETE | 
| 297 | include Make.dep |