| 1 | ##################################################### | 
| 2 | # Makefile for Oopse Utility Codes                  # | 
| 3 | ##################################################### | 
| 4 | # You should not change anything here.              # | 
| 5 | ##################################################### | 
| 6 |  | 
| 7 | TOP=../.. | 
| 8 |  | 
| 9 | .SUFFIXES : .cpp .c $(O) | 
| 10 |  | 
| 11 | # Extension of object files | 
| 12 | O=@OBJEXT@ | 
| 13 |  | 
| 14 | # Extension of executables | 
| 15 | EXE=@EXEEXT@ | 
| 16 |  | 
| 17 | # Bourn shell | 
| 18 | SHELL=/bin/sh | 
| 19 |  | 
| 20 | # Path prefix for installation links | 
| 21 | PREFIX=@prefix@ | 
| 22 |  | 
| 23 | # List of subdirectories | 
| 24 | SUBDIRS=@SUBDIRS@ | 
| 25 |  | 
| 26 | # Location of the oopse home | 
| 27 | OOPSE_HOME=@OOPSE_HOME@ | 
| 28 |  | 
| 29 | FORCE_PARAM_DIR=@OOPSE_HOME@/share/forceFields/ | 
| 30 | SAMPLE_SIM_DIR=@OOPSE_HOME@/share/samples/ | 
| 31 |  | 
| 32 | # SPRNG library path | 
| 33 | SPRNG_LIBDIR=@SPRNG_LIBDIR@ | 
| 34 |  | 
| 35 | # SPRNG library | 
| 36 | SPRNG_LIB=@SPRNG_LIB@ | 
| 37 |  | 
| 38 | # SPRNG include path | 
| 39 | SPRNG_INC=@SPRNG_INC@ | 
| 40 |  | 
| 41 | # MPICH library path | 
| 42 | MPI_LIBDIR=@MPI_LIBDIR@ | 
| 43 |  | 
| 44 | # MPICH library | 
| 45 | MPI_LIB=@MPI_LIB@ | 
| 46 |  | 
| 47 | # MPICH include path | 
| 48 | MPI_INC=@MPI_INC@ | 
| 49 |  | 
| 50 | # MPI F90 Module path | 
| 51 | MPI_F90_MODS=@MPI_F90_MODS@ | 
| 52 |  | 
| 53 | # Compiler dependent Fortran module | 
| 54 | F90LIBS = @F90LIBS@ | 
| 55 |  | 
| 56 | # Location of yacc (or its substitution) | 
| 57 | YACC=@YACC@ | 
| 58 |  | 
| 59 | #location of lex | 
| 60 | LEX=@LEX@ | 
| 61 |  | 
| 62 | # C compiler | 
| 63 | CC=@CC@ | 
| 64 |  | 
| 65 | # C++ compiler | 
| 66 |  | 
| 67 | CXX=@CXX@ | 
| 68 |  | 
| 69 | # F90 compiler | 
| 70 | F90=@F90@ | 
| 71 |  | 
| 72 | # ar | 
| 73 | AR=@AR@ | 
| 74 |  | 
| 75 | # ranlib | 
| 76 | RANLIB=@RANLIB@ | 
| 77 |  | 
| 78 | # rm | 
| 79 | RM=rm -f | 
| 80 |  | 
| 81 | # soft link | 
| 82 | LN_S=@LN_S@ | 
| 83 |  | 
| 84 | # BSD install | 
| 85 | INSTALL=@INSTALL@ | 
| 86 | INSTALL_PROGRAM=@INSTALL_PROGRAM@ | 
| 87 | INSTALL_DATA=@INSTALL_DATA@ | 
| 88 | MKINSTALLDIRS=@MKINSTALLDIRS@ | 
| 89 |  | 
| 90 | # CPP flags | 
| 91 | CPPFLAGS=@CPPFLAGS@ | 
| 92 |  | 
| 93 | # C flags | 
| 94 | CFLAGS_C=@CFLAGS@ | 
| 95 |  | 
| 96 | # C++ flags | 
| 97 | CXXFLAGS_C=@CXXFLAGS@ | 
| 98 |  | 
| 99 | # Preprocessor flag for fortran | 
| 100 | PREPFLAG=@PREPFLAG@ | 
| 101 |  | 
| 102 | # Preprocessor define flag for fortran | 
| 103 | PREPDEFFLAG=@PREPDEFFLAG@ | 
| 104 |  | 
| 105 | # Fortran flags | 
| 106 | FFLAGS_C=@F90FLAGS@ | 
| 107 |  | 
| 108 | # LDFLAGS | 
| 109 | LDFLAGS=@LDFLAGS@ | 
| 110 |  | 
| 111 | MPI_DECLARES= -DIS_MPI | 
| 112 |  | 
| 113 | # include paths starting with "." are all relative to the SUBDIRS!!! | 
| 114 |  | 
| 115 | INCLUDES= -I.. -I$(TOP)/../libBASS -I$(TOP)/../libmdtools | 
| 116 | CFLAGS=$(CFLAGS_C) $(INCLUDES) $(DECLARES) | 
| 117 | CXXFLAGS=$(CXXFLAGS_C) $(INCLUDES) $(DECLARES) | 
| 118 | DEPFLAGS=$(CFLAGS_C) -I. $(SPRNG_INC) -I$(TOP)/libBASS -I$(TOP)/libmdtools | 
| 119 |  | 
| 120 |  | 
| 121 | SYSBUILD=sysBuild$(EXE) | 
| 122 | BUILDER_LIB=libBuilder.a | 
| 123 | LBILAYER=latticeBilayer$(EXE) | 
| 124 | RBILAYER=randomBilayer$(EXE) | 
| 125 |  | 
| 126 | BASS_LIB=$(TOP)/libBASS/libBASS.a | 
| 127 | MD_LIB=$(TOP)/libmdtools/libmdtools.a | 
| 128 | LIBS=$(BASS_LIB) $(MD_LIB) | 
| 129 |  | 
| 130 | #SYSBUILD_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIBDIR) | 
| 131 | #SYSBUILD_LDADD=-lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 132 |  | 
| 133 |  | 
| 134 | SRC_DIR := $(PWD) | 
| 135 |  | 
| 136 | LBILAYER_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIBDIR) -L$(SRC_DIR) | 
| 137 | LBILAYER_LDADD=-lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 138 |  | 
| 139 | RBILAYER_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIBDIR) -L$(SRC_DIR) | 
| 140 | RBILAYER_LDADD=-lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) | 
| 141 |  | 
| 142 | PREFS=-DOOPSE_HOME=\"$(OOPSE_HOME)\" | 
| 143 |  | 
| 144 | obj/%.o: %.cpp | 
| 145 | cd obj; $(CXX) $(CXXFLAGS) -c $(SRC_DIR)/$< | 
| 146 |  | 
| 147 | MPIobj/%.o: %.cpp | 
| 148 | cd MPIobj; $(CXX) $(MPI_CXXFLAGS) -c $(SRC_DIR)/$< | 
| 149 |  | 
| 150 | obj/%.o: %.c | 
| 151 | cd obj; $(CC) $(CFLAGS) -c $(SRC_DIR)/$< | 
| 152 |  | 
| 153 | MPIobj/%.o: %.c | 
| 154 | cd MPIobj; $(CC) $(MPI_CFLAGS) -c $(SRC_DIR)/$< | 
| 155 |  | 
| 156 | # sysBuilder files | 
| 157 |  | 
| 158 | #SYSBUILD_C_FILES = $(DIR)/cmdline.c | 
| 159 | #SYSBUILD_CXX_FILES = \ | 
| 160 | #       $(DIR)/sysBuild.cpp \ | 
| 161 | #       $(DIR)/bilayerSys.cpp \ | 
| 162 | #       $(DIR)/MoLocator.cpp \ | 
| 163 | #       $(DIR)/latticeBuilder.cpp \ | 
| 164 | #       $(DIR)/nanoBuilder.cpp | 
| 165 |  | 
| 166 | #latticeBilayer files | 
| 167 |  | 
| 168 | LBILAYER_CXX_FILES = $(DIR)/latticeBilayer.cpp | 
| 169 |  | 
| 170 | RBILAYER_CXX_FILES = $(DIR)/randomBilayer.cpp | 
| 171 |  | 
| 172 | # libBuilder files | 
| 173 |  | 
| 174 | BUILDER_LIB_CXX_FILES = \ | 
| 175 | $(DIR)/MoLocator.cpp \ | 
| 176 | $(DIR)/latticeBuilder.cpp | 
| 177 |  | 
| 178 |  | 
| 179 | # the sources | 
| 180 |  | 
| 181 | DIR:=. | 
| 182 |  | 
| 183 | #SYSBUILD_C_SRCS := $(SYSBUILD_C_FILES) | 
| 184 | #SYSBUILD_CXX_SRCS := $(SYSBUILD_CXX_FILES) | 
| 185 | #SYSBUILD_SRCS := $(SYSBUILD_C_SRCS) $(SYSBUILD_CXX_SRCS) | 
| 186 |  | 
| 187 | LBILAYER_CXX_SRCS := $(LBILAYER_CXX_FILES) | 
| 188 | LBILAYER_SRCS := $(LBILAYER_CXX_SRCS) | 
| 189 |  | 
| 190 | RBILAYER_CXX_SRCS := $(RBILAYER_CXX_FILES) | 
| 191 | RBILAYER_SRCS := $(RBILAYER_CXX_SRCS) | 
| 192 |  | 
| 193 | BUILDER_LIB_CXX_SRCS := $(BUILDER_LIB_CXX_FILES) | 
| 194 | BUILDER_LIB_SRCS := $(BUILDER_LIB_CXX_SRCS) | 
| 195 |  | 
| 196 | C_CXX_SRCS :=  $(LBILAYER_SRCS) $(BUILDER_LIB_SRCS) $(RBILAYER_SRCS) | 
| 197 |  | 
| 198 | C_SRCS := | 
| 199 | CXX_SRCS := $(LBILAYER_CXX_SRCS) $(BUILDER_LIB_CXX_SRCS) $(RBILAYER_CXX_SRCS) | 
| 200 |  | 
| 201 | #the objects | 
| 202 |  | 
| 203 | DIR:=obj | 
| 204 |  | 
| 205 | #SYSBUILD_C_OBJS := $(SYSBUILD_C_FILES:.c=.o) | 
| 206 | #SYSBUILD_CXX_OBJS := $(SYSBUILD_CXX_FILES:.cpp=.o) | 
| 207 | #SYSBUILD_OBJS := $(SYSBUILD_C_OBJS) $(SYSBUILD_CXX_OBJS) | 
| 208 |  | 
| 209 | LBILAYER_CXX_OBJS := $(LBILAYER_CXX_FILES:.cpp=.o) | 
| 210 | LBILAYER_OBJS := $(LBILAYER_CXX_OBJS) | 
| 211 |  | 
| 212 | RBILAYER_CXX_OBJS := $(RBILAYER_CXX_FILES:.cpp=.o) | 
| 213 | RBILAYER_OBJS := $(RBILAYER_CXX_OBJS) | 
| 214 |  | 
| 215 | BUILDER_LIB_CXX_OBJS := $(BUILDER_LIB_CXX_FILES:.cpp=.o) | 
| 216 | BUILDER_LIB_OBJS := $(BUILDER_LIB_CXX_OBJS) | 
| 217 |  | 
| 218 | LIBSUBDIRS = \ | 
| 219 | obj | 
| 220 |  | 
| 221 | all : $(BUILDER_LIB) $(LBILAYER) $(RBILAYER) | 
| 222 |  | 
| 223 | depend: Make.dep | 
| 224 |  | 
| 225 | #sysBuild$(EXE) : $(SYSBUILD_OBJS) $(BASS_LIB) $(MD_LIB) | 
| 226 | #       $(CXX) $(CXXFLAGS) $(SYSBUILD_OBJS) -o $@ $(SYSBUILD_LDFLAGS) $(SYSBUILD_LDADD) | 
| 227 |  | 
| 228 | libBuilder.a: $(BUILDER_LIB_OBJS) | 
| 229 | $(RM) $@ | 
| 230 | $(AR) cr $@ $(BUILDER_LIB_OBJS) | 
| 231 | $(RANLIB) $@ | 
| 232 |  | 
| 233 | latticeBilayer$(EXE): $(LBILAYER_OBJS) $(BUILDER_LIB)  $(BASS_LIB) $(MD_LIB) | 
| 234 | $(CXX) $(CXXFLAGS) $(LBILAYER_OBJS) -o $@ $(LBILAYER_LDFLAGS) $(LBILAYER_LDADD) | 
| 235 |  | 
| 236 | randomBilayer$(EXE): $(RBILAYER_OBJS) $(BUILDER_LIB)  $(BASS_LIB) $(MD_LIB) | 
| 237 | $(CXX) $(CXXFLAGS) $(RBILAYER_OBJS) -o $@ $(RBILAYER_LDFLAGS) $(RBILAYER_LDADD) | 
| 238 |  | 
| 239 | install : $(LBILAYER) | 
| 240 | $(MKINSTALLDIRS) $(OOPSE_HOME)/bin | 
| 241 | $(INSTALL_PROGRAM) -s $(LBILAYER) $(OOPSE_HOME)/bin/$(LBILAYER) | 
| 242 | $(INSTALL_PROGRAM) -s $(RBILAYER) $(OOPSE_HOME)/bin/$(RBILAYER) | 
| 243 |  | 
| 244 |  | 
| 245 | tests : dummy | 
| 246 |  | 
| 247 |  | 
| 248 | $(OOPSE_HOME)/bin/$(LBILAYER) : $(LBILAYER) | 
| 249 | $(MAKE) install | 
| 250 |  | 
| 251 | links : $(OOPSE_HOME)/bin/$(LBILAYER) | 
| 252 | $(MKINSTALLDIRS) $(PREFIX)/bin | 
| 253 | cd $(PREFIX)/bin; $(LN_S) -f $(OOPSE_HOME)/bin/$(LBILAYER) $(LBILAYER) | 
| 254 | cd $(PREFIX)/bin; $(LN_S) -f $(OOPSE_HOME)/bin/$(RBILAYER) $(RBILAYER) | 
| 255 |  | 
| 256 | clean : dummy | 
| 257 | for i in $(LIBSUBDIRS); do \ | 
| 258 | (cd $$i; $(RM) *.o) || exit 1; \ | 
| 259 | done | 
| 260 | $(RM) $(LBILAYER) $(RBILAYER) $(BUILDER_LIB) *.o *~ Make.temp | 
| 261 |  | 
| 262 | distclean : dummy | 
| 263 | for i in $(LIBSUBDIRS); do \ | 
| 264 | (cd $$i; $(RM) *.o) || exit 1; \ | 
| 265 | done | 
| 266 | $(RM) $(LBILAYER) $(RBILAYER) $(BUILDER_LIB) *.o *~ Make.temp | 
| 267 |  | 
| 268 | devclean : distclean | 
| 269 |  | 
| 270 | Make.dep : | 
| 271 | echo "# DO NOT DELETE THIS LINE - used by make depend" > Make.dep | 
| 272 | $(CC) $(DEPFLAGS) -MM $(C_SRCS) \ | 
| 273 | | sed 's/\.o:/\$$(O)\ :/g' > Make.temp | 
| 274 | $(CXX) $(DEPFLAGS) -MM $(CXX_SRCS) \ | 
| 275 | | sed 's/\.o:/\$$(O)\ :/g' >> Make.temp | 
| 276 | cat Make.temp | sed 's/^[a-zA-Z0-9]/obj\/&/g' >> Make.dep | 
| 277 | cat Make.temp | sed 's/^[a-zA-Z0-9]/MPIobj\/&/g' >> Make.dep | 
| 278 | $(RM) Make.temp | 
| 279 |  | 
| 280 | tags : $(C_CXX_SRCS) | 
| 281 | ctags $(C_CXX_SRCS) | 
| 282 |  | 
| 283 | dummy : | 
| 284 |  | 
| 285 | # DO NOT DELETE | 
| 286 | include Make.dep |