| 106 |
|
double thermalTime; // the temp kick interval |
| 107 |
|
double currentTime; // Used primarily for correlation Functions |
| 108 |
|
double resetTime; // Use to reset the integrator periodically |
| 109 |
+ |
short int have_target_temp; |
| 110 |
|
|
| 111 |
|
int n_mol; // n_molecules; |
| 112 |
|
Molecule* molecules; // the array of molecules |
| 125 |
|
Restraints* restraint; |
| 126 |
|
bool has_minimizer; |
| 127 |
|
|
| 128 |
< |
char finalName[300]; // the name of the eor file to be written |
| 129 |
< |
char sampleName[300]; // the name of the dump file to be written |
| 130 |
< |
char statusName[300]; // the name of the stat file to be written |
| 130 |
< |
char rawPotName[300]; // the name of the raw file to be written |
| 128 |
> |
string finalName; // the name of the eor file to be written |
| 129 |
> |
string sampleName; // the name of the dump file to be written |
| 130 |
> |
string statusName; // the name of the stat file to be written |
| 131 |
|
|
| 132 |
|
int seed; //seed for random number generator |
| 133 |
|
|