106 |
|
double thermalTime; // the temp kick interval |
107 |
|
double currentTime; // Used primarily for correlation Functions |
108 |
|
double resetTime; // Use to reset the integrator periodically |
109 |
+ |
short int have_target_temp; |
110 |
|
|
111 |
|
int n_mol; // n_molecules; |
112 |
|
Molecule* molecules; // the array of molecules |
125 |
|
Restraints* restraint; |
126 |
|
bool has_minimizer; |
127 |
|
|
128 |
< |
char finalName[300]; // the name of the eor file to be written |
129 |
< |
char sampleName[300]; // the name of the dump file to be written |
130 |
< |
char statusName[300]; // the name of the stat file to be written |
130 |
< |
char rawPotName[300]; // the name of the raw file to be written |
128 |
> |
string finalName; // the name of the eor file to be written |
129 |
> |
string sampleName; // the name of the dump file to be written |
130 |
> |
string statusName; // the name of the stat file to be written |
131 |
|
|
132 |
|
int seed; //seed for random number generator |
133 |
|
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