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Revision: 4130
Committed: Wed May 21 19:44:25 2014 UTC (11 years, 3 months ago) by kstocke1
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# User Rev Content
1 kstocke1 4130 \relax
2     \citation{achemso-control}
3     \providecommand{\mciteSetMaxWidth}[3]{\relax}
4     \providecommand{\mciteSetMaxCount}[3]{\relax}
5     \bibstyle{achemso}
6     \citation{Wilson:2002uq}
7     \citation{Wilson:2002uq}
8     \citation{Badia1996:2}
9     \citation{Badia1996}
10     \citation{Henz2007}
11     \citation{Badia1997:2}
12     \citation{Badia1997}
13     \citation{Badia2000}
14     \citation{Badia1996:2,Badia1996,Henz2007,Badia1997:2,Badia1997,Badia2000}
15     \citation{Badia1996:2}
16     \citation{Badia1996}
17     \citation{Henz2007}
18     \@writefile{toc}{\contentsline {section}{\numberline {1}Introduction}{2}}
19     \@writefile{toc}{\contentsline {section}{\numberline {2}Interfacial Thermal Conductance of Metallic Nanoparticles}{2}}
20     \@writefile{toc}{\contentsline {section}{\numberline {3}Structure of Self-Assembled Monolayers on Nanoparticles}{2}}
21     \@writefile{toc}{\contentsline {section}{\numberline {4}Non-Periodic Velocity Shearing and Scaling RNEMD Methodology}{3}}
22     \newlabel{eq:Kc}{{2}{3}}
23     \newlabel{eq:Kh}{{3}{3}}
24     \citation{PhysRevB.59.3527}
25     \citation{PhysRevB.59.3527}
26     \citation{TraPPE-UA.alkanes}
27     \citation{TraPPE-UA.alkanes}
28     \citation{vlugt:cpc2007154}
29     \citation{vlugt:cpc2007154}
30     \citation{hautman:4994}
31     \citation{hautman:4994}
32     \@writefile{toc}{\contentsline {section}{\numberline {5}Calculating Transport Properties from Non-Periodic VSS-RNEMD}{4}}
33     \@writefile{toc}{\contentsline {subsection}{\numberline {5.1}Interfacial Thermal Conductance}{4}}
34     \@writefile{toc}{\contentsline {section}{\numberline {6}Computational Details}{4}}
35     \@writefile{toc}{\contentsline {subsection}{\numberline {6.1}Force Fields}{4}}
36     \citation{Badia1996:2}
37     \citation{packmol}
38     \citation{packmol}
39     \citation{Vardeman2011}
40     \citation{Vardeman2011}
41     \@writefile{toc}{\contentsline {subsection}{\numberline {6.2}Simulation Protocol}{5}}
42     \@writefile{toc}{\contentsline {section}{\numberline {7}Interfacial Thermal Conductance}{6}}
43     \@writefile{toc}{\contentsline {subsection}{\numberline {7.1}Effect of Particle Size}{6}}
44     \@writefile{toc}{\contentsline {subsection}{\numberline {7.2}Effect of Ligand Chain Length}{6}}
45     \@writefile{toc}{\contentsline {section}{\numberline {8}Mechanisms for Heat Transfer}{6}}
46     \@writefile{toc}{\contentsline {subsection}{\numberline {8.1}Corrugation of Particle Surface}{6}}
47     \@writefile{lof}{\contentsline {figure}{\numberline {1}{\ignorespaces Interfacial thermal conductance ($G$) and corrugation values for 4 sizes of solvated nanoparticles that are bare or protected with a 50\% coverage of C$_{4}$, C$_{8}$, or C$_{12}$ alkanethiolate ligands.\relax }}{7}}
48     \providecommand*\caption@xref[2]{\@setref\relax\@undefined{#1}}
49     \newlabel{fig:NPthiols_Gcombo}{{1}{7}}
50     \@writefile{lof}{\contentsline {figure}{\numberline {2}{\ignorespaces Computed solvent escape rates, ligand orientational P$_2$ values, and interfacial solvent orientational $P_2$ values for 4 sizes of solvated nanoparticles that are bare or protected with a 50\% coverage of C$_{4}$, C$_{8}$, or C$_{12}$ alkanethiolate ligands.\relax }}{8}}
51     \newlabel{fig:NPthiols_combo}{{2}{8}}
52     \citation{Henz2007}
53     \citation{Steinhardt1983}
54     \citation{Steinhardt1983}
55     \@writefile{lof}{\contentsline {figure}{\numberline {3}{\ignorespaces Fraction of gold atoms with fcc ordering as a function of radius for a 10 \r A\ radius nanoparticle. The decreased fraction of fcc ordered atoms in ligand-protected nanoparticles relative to bare particles indicates restructuring of the nanoparticle surface by the thiolate sulfur atoms.\relax }}{10}}
56     \newlabel{fig:Corrugation}{{3}{10}}
57     \@writefile{toc}{\contentsline {subsection}{\numberline {8.2}Mobility of Interfacial Solvent}{11}}
58     \newlabel{eq:mobility}{{7}{11}}
59     \@writefile{toc}{\contentsline {subsection}{\numberline {8.3}Orientation of Ligand Chains}{12}}
60     \@writefile{toc}{\contentsline {subsection}{\numberline {8.4}Orientation of Interfacial Solvent}{12}}
61     \@writefile{lof}{\contentsline {figure}{\numberline {4}{\ignorespaces The two extreme cases of ligand orientation relative to the nanoparticle surface: the ligand completely outstretched ($\qopname \relax o{cos}{(\theta )} = -1$) and the ligand fully lying down on the particle surface ($\qopname \relax o{cos}{(\theta )} = 0$).\relax }}{13}}
62     \newlabel{fig:NP_pAngle}{{4}{13}}
63     \@writefile{toc}{\contentsline {subsection}{\numberline {8.5}Solvent Penetration of Ligand Layer}{14}}
64     \@writefile{lof}{\contentsline {figure}{\numberline {5}{\ignorespaces Radial hexane density profiles for 25 \r A\ radius nanoparticles with no ligands (circles), C$_{4}$ ligands (squares), C$_{8}$ ligands (triangles), and C$_{12}$ ligands (diamonds). As ligand chain length increases, the nearby solvent is excluded from the ligand layer. Some solvent is present inside the particle $r_{max}$ location due to faceting of the nanoparticle surface.\relax }}{15}}
65     \newlabel{fig:hex_density}{{5}{15}}
66     \@writefile{toc}{\contentsline {section}{\numberline {9}Discussion}{16}}
67     \bibdata{acs-NPthiols,NPthiols}
68     \bibcite{Wilson:2002uq}{{1}{2002}{{Wilson et~al.}}{{Wilson, Hu, Cahill, and Braun}}}
69     \bibcite{Badia1996:2}{{2}{1996}{{Badia et~al.}}{{Badia, Singh, Demers, Cuccia, Brown, and Lennox}}}
70     \bibcite{Badia1996}{{3}{1996}{{Badia et~al.}}{{Badia, Gao, Singh, Demers, Cuccia, and Reven}}}
71     \bibcite{Henz2007}{{4}{2007}{{Henz and Zachairah}}{{Henz, and Zachairah}}}
72     \bibcite{Badia1997:2}{{5}{1997}{{Badia et~al.}}{{Badia, Demers, Dickinson, Morin, Lennox, and Reven}}}
73     \bibcite{Badia1997}{{6}{2012}{{Badia et~al.}}{{Badia, Cuccia, Demers, Morin, and Lennox}}}
74     \bibcite{Badia2000}{{7}{2000}{{Badia et~al.}}{{Badia, Lennox, and Reven}}}
75     \bibcite{PhysRevB.59.3527}{{8}{1999}{{Qi et~al.}}{{Qi, \c {C}a\v {g}in, Kimura, and {Goddard III}}}}
76     \bibcite{TraPPE-UA.alkanes}{{9}{1998}{{Martin and Siepmann}}{{Martin, and Siepmann}}}
77     \bibcite{vlugt:cpc2007154}{{10}{2007}{{Schapotschnikow et~al.}}{{Schapotschnikow, Pool, and Vlugt}}}
78     \bibcite{hautman:4994}{{11}{1989}{{Hautman and Klein}}{{Hautman, and Klein}}}
79     \bibcite{packmol}{{12}{2009}{{Mart\'{\i }nez et~al.}}{{Mart\'{\i }nez, Andrade, Birgin, and Mart\'{\i }nez}}}
80     \bibcite{Vardeman2011}{{13}{2011}{{Vardeman et~al.}}{{Vardeman, Stocker, and Gezelter}}}
81     \bibcite{Steinhardt1983}{{14}{1983}{{Steinhardt et~al.}}{{Steinhardt, Nelson, and Ronchetti}}}
82     \mciteSetMaxCount{main}{bibitem}{14}
83     \mciteSetMaxCount{main}{subitem}{1}
84     \mciteSetMaxWidth{main}{bibitem}{786432}
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