| 15 |
|
int nTorsions; // .. . . .. . . torsions . . .. . . |
| 16 |
|
int nOriented; // .. . . . .. . oriented atoms . . . |
| 17 |
|
int nExcludes; // . . .. . . . .exclude pairs.. . . . |
| 18 |
+ |
|
| 19 |
+ |
double* COM; // the location of the center of mass of the molecule |
| 20 |
|
|
| 21 |
|
Atom** myAtoms; // the array of atoms |
| 22 |
|
Exclude** myExcludes;// the array of Excluded pairs |
| 59 |
|
double getPotential( void ); |
| 60 |
|
|
| 61 |
|
void printMe( void ); |
| 60 |
– |
|
| 62 |
|
|
| 63 |
+ |
double* getCOM(); |
| 64 |
+ |
void moveCOM(double* delta); |
| 65 |
+ |
|
| 66 |
|
private: |
| 67 |
|
|
| 68 |
|
int stampID; // the ID in the BASS component stamp array |
| 82 |
|
Torsion** myTorsions; |
| 83 |
|
Exclude** myExcludes; // array of the excluded pairs of long range forces |
| 84 |
|
|
| 85 |
+ |
double* COM; |
| 86 |
|
}; |
| 87 |
|
|
| 88 |
|
#endif |