| 1 | mmeineke | 377 | #ifndef __FORCEFIELDS_H__ | 
| 2 |  |  | #define __FORCEFIELDS_H__ | 
| 3 |  |  |  | 
| 4 |  |  | #define MK_STR(s) # s | 
| 5 |  |  | #define STR_DEFINE(t, s) t = MK_STR(s) | 
| 6 |  |  |  | 
| 7 |  |  |  | 
| 8 |  |  | #include <cstdio> | 
| 9 |  |  | #include <cstdlib> | 
| 10 |  |  |  | 
| 11 |  |  | #include "Atom.hpp" | 
| 12 |  |  | #include "SimInfo.hpp" | 
| 13 |  |  |  | 
| 14 |  |  | #ifdef IS_MPI | 
| 15 |  |  | #include "mpiForceField.h" | 
| 16 |  |  | #endif | 
| 17 |  |  |  | 
| 18 |  |  | #include "fForceField.h" | 
| 19 |  |  | #include "fortranWrapDefines.hpp" | 
| 20 |  |  |  | 
| 21 |  |  | class bond_pair{ | 
| 22 |  |  | public: | 
| 23 |  |  | bond_pair(){} | 
| 24 |  |  | ~bond_pair(){} | 
| 25 |  |  |  | 
| 26 |  |  | int a; | 
| 27 |  |  | int b; | 
| 28 |  |  | }; | 
| 29 |  |  |  | 
| 30 |  |  | class bend_set{ | 
| 31 |  |  | public: | 
| 32 |  |  | bend_set(){ isGhost = 0; } | 
| 33 |  |  | ~bend_set(){} | 
| 34 |  |  |  | 
| 35 |  |  | int ghost; | 
| 36 |  |  | int isGhost; | 
| 37 |  |  |  | 
| 38 |  |  | int a; | 
| 39 |  |  | int b; | 
| 40 |  |  | int c; | 
| 41 |  |  | }; | 
| 42 |  |  |  | 
| 43 |  |  | class torsion_set{ | 
| 44 |  |  | public: | 
| 45 |  |  | torsion_set(){} | 
| 46 |  |  | ~torsion_set(){} | 
| 47 |  |  |  | 
| 48 |  |  | int a; | 
| 49 |  |  | int b; | 
| 50 |  |  | int c; | 
| 51 |  |  | int d; | 
| 52 |  |  | }; | 
| 53 |  |  |  | 
| 54 |  |  |  | 
| 55 |  |  |  | 
| 56 |  |  | class ForceFields{ | 
| 57 |  |  |  | 
| 58 |  |  | public: | 
| 59 |  |  | ForceFields(){ frcFile = NULL; entry_plug = NULL; } | 
| 60 |  |  | virtual ~ForceFields(){} | 
| 61 |  |  |  | 
| 62 |  |  | void setSimInfo( SimInfo* the_entry_plug ) { entry_plug = the_entry_plug; } | 
| 63 | mmeineke | 420 |  | 
| 64 |  |  | virtual void readParams( void ) = 0; | 
| 65 |  |  | virtual void cleanMe( void ) = 0; | 
| 66 |  |  |  | 
| 67 |  |  |  | 
| 68 |  |  | virtual void initializeAtoms( int nAtoms, Atom** atomArray ) = 0; | 
| 69 |  |  | virtual void initializeBonds( int nBonds, Bond** bondArray, | 
| 70 |  |  | bond_pair* the_bonds ) = 0; | 
| 71 |  |  | virtual void initializeBends( int nBends, Bend** bendArray, | 
| 72 |  |  | bend_set* the_bends ) = 0; | 
| 73 |  |  | virtual void initializeTorsions( int nTorsions, Torsion** torsionArray, | 
| 74 |  |  | torsion_set* the_torsions ) = 0; | 
| 75 | mmeineke | 377 | virtual void initForceField( int ljMixRule ) = 0; | 
| 76 | mmeineke | 420 |  | 
| 77 |  |  | virtual void calcRcut( void ); | 
| 78 | mmeineke | 377 | virtual void doForces( int calcPot, int calcStress ); | 
| 79 |  |  |  | 
| 80 |  |  | void setFortranForceLoop( void (*fsub) doForceLoopList ){ | 
| 81 |  |  | fortranForceLoop = fsub; | 
| 82 |  |  | } | 
| 83 |  |  |  | 
| 84 |  |  | protected: | 
| 85 |  |  |  | 
| 86 |  |  | void initFortran( int ljMixPolicy, int useReactionField ); | 
| 87 |  |  | void (*fortranForceLoop) doForceLoopList; | 
| 88 |  |  |  | 
| 89 |  |  | FILE *frcFile; | 
| 90 |  |  | SimInfo* entry_plug; | 
| 91 |  |  |  | 
| 92 |  |  | int lineNum; | 
| 93 |  |  | char readLine[500]; | 
| 94 |  |  | char* eof_test; | 
| 95 | mmeineke | 420 | double bigSigma; | 
| 96 | mmeineke | 377 |  | 
| 97 |  |  | }; | 
| 98 |  |  |  | 
| 99 |  |  |  | 
| 100 |  |  | class TraPPE_ExFF : public ForceFields{ | 
| 101 |  |  |  | 
| 102 |  |  | public: | 
| 103 |  |  | TraPPE_ExFF(); | 
| 104 |  |  | virtual ~TraPPE_ExFF(); | 
| 105 |  |  |  | 
| 106 | mmeineke | 420 | void readParams(); | 
| 107 |  |  | void cleanMe( void ); | 
| 108 |  |  |  | 
| 109 |  |  | void initializeAtoms( int nAtoms, Atom** atomArray ); | 
| 110 |  |  | void initializeBonds( int nBonds, Bond** bondArray, | 
| 111 |  |  | bond_pair* the_bonds ); | 
| 112 |  |  | void initializeBends( int nBends, Bend** bendArray, | 
| 113 |  |  | bend_set* the_bends ); | 
| 114 |  |  | void initializeTorsions( int nTorsions, Torsion** torsionArray, | 
| 115 |  |  | torsion_set* the_torsions ); | 
| 116 |  |  |  | 
| 117 | mmeineke | 424 | void initForceField( int ljMixRule ); | 
| 118 |  |  |  | 
| 119 | mmeineke | 377 | private: | 
| 120 |  |  |  | 
| 121 |  |  | void fastForward( char* stopText, char* searchOwner ); | 
| 122 |  |  | }; | 
| 123 |  |  |  | 
| 124 |  |  | class LJ_FF : public ForceFields{ | 
| 125 |  |  |  | 
| 126 |  |  | public: | 
| 127 |  |  | LJ_FF(); | 
| 128 |  |  | virtual ~LJ_FF(); | 
| 129 |  |  |  | 
| 130 |  |  |  | 
| 131 | mmeineke | 420 | void readParams(); | 
| 132 |  |  | void cleanMe( void ); | 
| 133 |  |  |  | 
| 134 |  |  | void initializeAtoms( int nAtoms, Atom** atomArray ); | 
| 135 |  |  | void initializeBonds( int nBonds, Bond** bondArray, | 
| 136 |  |  | bond_pair* the_bonds ); | 
| 137 |  |  | void initializeBends( int nBends, Bend** bendArray, | 
| 138 |  |  | bend_set* the_bends ); | 
| 139 |  |  | void initializeTorsions( int nTorsions, Torsion** torsionArray, | 
| 140 |  |  | torsion_set* the_torsions ); | 
| 141 | mmeineke | 424 |  | 
| 142 |  |  | void initForceField( int ljMixRule ); | 
| 143 |  |  |  | 
| 144 | mmeineke | 377 | private: | 
| 145 |  |  |  | 
| 146 |  |  | void fastForward( char* stopText, char* searchOwner ); | 
| 147 | mmeineke | 420 |  | 
| 148 | mmeineke | 377 | }; | 
| 149 |  |  |  | 
| 150 |  |  | #endif | 
| 151 |  |  |  |