branches/development/CMakeLists.txt
|
modified
, text changed
|
branches/development/src/applications/atom2md/atom2md.cpp
|
modified
, text changed
|
branches/development/src/applications/dynamicProps/ActionCorrFunc.cpp
|
modified
, text changed
|
branches/development/src/applications/dynamicProps/EnergyCorrFunc.cpp
|
modified
, text changed
|
branches/development/src/applications/dynamicProps/StressCorrFunc.cpp
|
modified
, text changed
|
branches/development/src/applications/hydrodynamics/ApproximationModel.cpp
|
modified
, text changed
|
branches/development/src/applications/nanoparticleBuilder/shapedLatticePentRod.cpp
|
modified
, text changed
|
branches/development/src/applications/openmd/openmd.cpp
|
modified
, text changed
|
branches/development/src/applications/randomBuilder/randomBuilder.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/AngleR.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/BOPofR.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/BondAngleDistribution.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/BondOrderParameter.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/DensityPlot.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/GofAngle2.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/GofR.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/GofRAngle.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/GofRZ.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/GofXyz.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/GofZ.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/Hxy.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/NanoLength.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/NanoLength.hpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/ObjectCount.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/P2OrderParameter.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/RhoR.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/RhoZ.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/StaticProps.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/TetrahedralityParam.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/TetrahedralityParamZ.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/TetrahedralityParamZ.hpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/TwoDGofR.cpp
|
modified
, text changed
|
branches/development/src/applications/staticProps/pAngle.cpp
|
modified
, text changed
|
branches/development/src/brains/BlockSnapshotManager.cpp
|
modified
, text changed
|
branches/development/src/brains/ForceManager.cpp
|
modified
, text changed
|
branches/development/src/brains/SimCreator.cpp
|
modified
, text changed
|
branches/development/src/brains/SimInfo.cpp
|
modified
, text changed
|
branches/development/src/brains/Stats.cpp
|
modified
, text changed
|
branches/development/src/brains/Thermo.cpp
|
modified
, text changed
|
branches/development/src/config.h.cmake
|
modified
, text changed
|
branches/development/src/flucq/FluctuatingChargeLangevin.cpp
|
modified
, text changed
|
branches/development/src/flucq/FluctuatingChargeObjectiveFunction.cpp
|
modified
, text changed
|
branches/development/src/getopt.h
|
added
|
branches/development/src/integrators/LangevinHullForceManager.cpp
|
modified
, text changed
|
branches/development/src/integrators/NPTsz.cpp
|
modified
, text changed
|
branches/development/src/integrators/NPTxyz.cpp
|
modified
, text changed
|
branches/development/src/io/BendTypesSectionParser.cpp
|
modified
, text changed
|
branches/development/src/io/ChargeAtomTypesSectionParser.cpp
|
modified
, text changed
|
branches/development/src/io/DumpWriter.cpp
|
modified
, text changed
|
branches/development/src/io/DumpWriter.hpp
|
modified
, text changed
|
branches/development/src/io/FluctuatingChargeAtomTypesSectionParser.cpp
|
modified
, text changed
|
branches/development/src/io/InversionTypesSectionParser.cpp
|
modified
, text changed
|
branches/development/src/io/PolarizableAtomTypesSectionParser.cpp
|
modified
, text changed
|
branches/development/src/io/StatWriter.cpp
|
modified
, text changed
|
branches/development/src/io/TorsionTypesSectionParser.cpp
|
modified
, text changed
|
branches/development/src/math/CubicSpline.cpp
|
modified
, text changed
|
branches/development/src/math/DynamicRectMatrix.hpp
|
modified
, text changed
|
branches/development/src/math/MersenneTwister.hpp
|
modified
, text changed
|
branches/development/src/math/Quaternion.hpp
|
modified
, text changed
|
branches/development/src/math/RMSD.hpp
|
modified
, text changed
|
branches/development/src/math/SphericalHarmonic.cpp
|
modified
, text changed
|
branches/development/src/math/SquareMatrix3.hpp
|
modified
, text changed
|
branches/development/src/math/Vector.hpp
|
modified
, text changed
|
branches/development/src/math/erfc.hpp
|
added
|
branches/development/src/nonbonded/EAM.cpp
|
modified
, text changed
|
branches/development/src/nonbonded/Electrostatic.cpp
|
modified
, text changed
|
branches/development/src/nonbonded/Electrostatic.hpp
|
modified
, text changed
|
branches/development/src/nonbonded/SlaterIntegrals.hpp
|
modified
, text changed
|
branches/development/src/nonbonded/Sticky.cpp
|
modified
, text changed
|
branches/development/src/parallel/ForceMatrixDecomposition.cpp
|
modified
, text changed
|
branches/development/src/primitives/Atom.cpp
|
modified
, text changed
|
branches/development/src/primitives/Bend.cpp
|
modified
, text changed
|
branches/development/src/primitives/GhostBend.cpp
|
modified
, text changed
|
branches/development/src/primitives/GhostTorsion.cpp
|
modified
, text changed
|
branches/development/src/primitives/Inversion.cpp
|
modified
, text changed
|
branches/development/src/primitives/RigidBody.cpp
|
modified
, text changed
|
branches/development/src/primitives/Torsion.cpp
|
modified
, text changed
|
branches/development/src/restraints/MolecularRestraint.cpp
|
modified
, text changed
|
branches/development/src/restraints/ObjectRestraint.cpp
|
modified
, text changed
|
branches/development/src/restraints/RestraintForceManager.cpp
|
modified
, text changed
|
branches/development/src/selection/DistanceFinder.cpp
|
modified
, text changed
|
branches/development/src/selection/HullFinder.cpp
|
modified
, text changed
|
branches/development/src/selection/NameFinder.cpp
|
modified
, text changed
|
branches/development/src/selection/SelectionCompiler.cpp
|
modified
, text changed
|
branches/development/src/selection/SelectionEvaluator.cpp
|
modified
, text changed
|
branches/development/src/selection/SelectionEvaluator.hpp
|
modified
, text changed
|
branches/development/src/types/BondStamp.cpp
|
modified
, text changed
|
branches/development/src/types/BondStamp.hpp
|
modified
, text changed
|
branches/development/src/types/CharmmTorsionType.cpp
|
modified
, text changed
|
branches/development/src/types/FluctuatingChargeAdapter.cpp
|
modified
, text changed
|
branches/development/src/types/ImproperCosineInversionType.cpp
|
modified
, text changed
|
branches/development/src/types/MoleculeStamp.cpp
|
modified
, text changed
|
branches/development/src/types/MoleculeStamp.hpp
|
modified
, text changed
|
branches/development/src/utils/Algorithm.hpp
|
modified
, text changed
|
branches/development/src/utils/ElementsTable.cpp
|
modified
, text changed
|
branches/development/src/utils/Grid3d.hpp
|
modified
, text changed
|
branches/development/src/utils/MoLocator.cpp
|
modified
, text changed
|
branches/development/src/utils/NumericConstant.hpp
|
modified
, text changed
|
branches/development/src/utils/OpenMDBitSet.cpp
|
modified
, text changed
|
branches/development/src/utils/OpenMDBitSet.hpp
|
modified
, text changed
|