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root/OpenMD/trunk/src/visitors/AtomNameVisitor.cpp
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Comparing trunk/src/visitors/AtomNameVisitor.cpp (file contents):
Revision 1455 by gezelter, Thu Jun 24 20:44:18 2010 UTC vs.
Revision 1793 by gezelter, Fri Aug 31 21:16:10 2012 UTC

# Line 36 | Line 36
36   * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
37   * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
38   * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
39 < * [4]  Vardeman & Gezelter, in progress (2009).                        
39 > * [4]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).                        
40   */
41   #include <sstream>
42   #include <fstream>
# Line 57 | Line 57 | namespace OpenMD {
57    void AtomNameVisitor::visitAtom(Atom* atom) {
58      AtomData* atomData;
59      GenericData* data;    
60    bool haveAtomData;
60      
61      data = atom->getPropertyByName("ATOMDATA");
62      if(data != NULL){
# Line 65 | Line 64 | namespace OpenMD {
64        if(atomData == NULL){
65          std::cerr << "can not get Atom Data from " << atom->getType() << std::endl;
66          atomData = new AtomData;
68        haveAtomData = false;      
69      } else {
70        haveAtomData = true;
67        }
68      } else {
69 <      atomData = new AtomData;
74 <      haveAtomData = false;
69 >      atomData = new AtomData;      
70      }
71      
72      std::vector<AtomInfo*>::iterator i;

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