1 |
tim |
277 |
/* |
2 |
|
|
* Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. |
3 |
|
|
* |
4 |
|
|
* The University of Notre Dame grants you ("Licensee") a |
5 |
|
|
* non-exclusive, royalty free, license to use, modify and |
6 |
|
|
* redistribute this software in source and binary code form, provided |
7 |
|
|
* that the following conditions are met: |
8 |
|
|
* |
9 |
|
|
* 1. Acknowledgement of the program authors must be made in any |
10 |
|
|
* publication of scientific results based in part on use of the |
11 |
|
|
* program. An acceptable form of acknowledgement is citation of |
12 |
|
|
* the article in which the program was described (Matthew |
13 |
|
|
* A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
14 |
|
|
* J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
15 |
|
|
* Parallel Simulation Engine for Molecular Dynamics," |
16 |
|
|
* J. Comput. Chem. 26, pp. 252-271 (2005)) |
17 |
|
|
* |
18 |
|
|
* 2. Redistributions of source code must retain the above copyright |
19 |
|
|
* notice, this list of conditions and the following disclaimer. |
20 |
|
|
* |
21 |
|
|
* 3. Redistributions in binary form must reproduce the above copyright |
22 |
|
|
* notice, this list of conditions and the following disclaimer in the |
23 |
|
|
* documentation and/or other materials provided with the |
24 |
|
|
* distribution. |
25 |
|
|
* |
26 |
|
|
* This software is provided "AS IS," without a warranty of any |
27 |
|
|
* kind. All express or implied conditions, representations and |
28 |
|
|
* warranties, including any implied warranty of merchantability, |
29 |
|
|
* fitness for a particular purpose or non-infringement, are hereby |
30 |
|
|
* excluded. The University of Notre Dame and its licensors shall not |
31 |
|
|
* be liable for any damages suffered by licensee as a result of |
32 |
|
|
* using, modifying or distributing the software or its |
33 |
|
|
* derivatives. In no event will the University of Notre Dame or its |
34 |
|
|
* licensors be liable for any lost revenue, profit or data, or for |
35 |
|
|
* direct, indirect, special, consequential, incidental or punitive |
36 |
|
|
* damages, however caused and regardless of the theory of liability, |
37 |
|
|
* arising out of the use of or inability to use software, even if the |
38 |
|
|
* University of Notre Dame has been advised of the possibility of |
39 |
|
|
* such damages. |
40 |
|
|
*/ |
41 |
|
|
|
42 |
|
|
#include "utils/BitSet.hpp" |
43 |
|
|
#include <algorithm> |
44 |
tim |
278 |
#include <cassert> |
45 |
|
|
|
46 |
tim |
277 |
namespace oopse { |
47 |
|
|
int BitSet::countBits() { |
48 |
tim |
278 |
return std::count(bitset_.begin(), bitset_.end(), true); |
49 |
tim |
277 |
} |
50 |
|
|
|
51 |
|
|
void BitSet::flip(int fromIndex, int toIndex) { |
52 |
|
|
assert(fromIndex <= toIndex); |
53 |
|
|
assert(fromIndex >=0); |
54 |
|
|
assert(toIndex <= size()); |
55 |
|
|
std::vector<char>::iterator first = bitset_.begin() + fromIndex; |
56 |
|
|
std::vector<char>::iterator last = bitset_.begin() + toIndex; |
57 |
|
|
|
58 |
|
|
std::transform(first, last, first, std::logical_not<bool>()); |
59 |
|
|
|
60 |
|
|
} |
61 |
|
|
|
62 |
|
|
BitSet BitSet::get(int fromIndex, int toIndex) { |
63 |
|
|
assert(fromIndex <= toIndex); |
64 |
|
|
assert(fromIndex >=0); |
65 |
|
|
assert(toIndex <= size()); |
66 |
|
|
std::vector<char>::iterator first = bitset_.begin() + fromIndex; |
67 |
|
|
std::vector<char>::iterator last = bitset_.begin() + toIndex; |
68 |
|
|
|
69 |
|
|
BitSet result; |
70 |
|
|
std::copy(first, last, std::back_inserter(result.bitset_)); |
71 |
|
|
return result; |
72 |
|
|
} |
73 |
|
|
|
74 |
tim |
278 |
bool BitSet::none() { |
75 |
tim |
277 |
std::vector<char>::iterator i = std::find(bitset_.begin(), bitset_.end(), true); |
76 |
|
|
return i == bitset_.end() ? true : false; |
77 |
|
|
} |
78 |
|
|
|
79 |
|
|
int BitSet::nextOffBit(int fromIndex) { |
80 |
tim |
278 |
++fromIndex; |
81 |
|
|
while (fromIndex < size()) { |
82 |
|
|
if (!bitset_[fromIndex]) { |
83 |
|
|
return fromIndex; |
84 |
|
|
} |
85 |
|
|
++fromIndex; |
86 |
|
|
} |
87 |
tim |
277 |
|
88 |
tim |
278 |
return -1; |
89 |
tim |
277 |
} |
90 |
|
|
|
91 |
tim |
278 |
int BitSet::nextOnBit(int fromIndex) { |
92 |
|
|
++fromIndex; |
93 |
|
|
while (fromIndex < size()) { |
94 |
|
|
if (bitset_[fromIndex]) { |
95 |
|
|
return fromIndex; |
96 |
|
|
} |
97 |
|
|
++fromIndex; |
98 |
|
|
} |
99 |
tim |
277 |
|
100 |
tim |
278 |
return -1; |
101 |
|
|
} |
102 |
|
|
|
103 |
|
|
void BitSet::andOperator (const BitSet& bs) { |
104 |
tim |
277 |
assert(size() == bs.size()); |
105 |
|
|
|
106 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), std::logical_and<bool>()); |
107 |
|
|
} |
108 |
|
|
|
109 |
tim |
278 |
void BitSet::orOperator (const BitSet& bs) { |
110 |
tim |
277 |
assert(size() == bs.size()); |
111 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), std::logical_or<bool>()); |
112 |
|
|
} |
113 |
|
|
|
114 |
tim |
278 |
void BitSet::xorOperator (const BitSet& bs) { |
115 |
tim |
277 |
assert(size() == bs.size()); |
116 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), oopse::logical_xor<bool>()); |
117 |
|
|
} |
118 |
|
|
|
119 |
|
|
void BitSet::setBits(int fromIndex, int toIndex, bool value) { |
120 |
|
|
assert(fromIndex <= toIndex); |
121 |
|
|
assert(fromIndex >=0); |
122 |
|
|
assert(toIndex <= size()); |
123 |
|
|
std::vector<char>::iterator first = bitset_.begin() + fromIndex; |
124 |
|
|
std::vector<char>::iterator last = bitset_.begin() + toIndex; |
125 |
|
|
std::fill(first, last, value); |
126 |
|
|
} |
127 |
|
|
|
128 |
tim |
278 |
BitSet operator| (const BitSet& bs1, const BitSet& bs2) { |
129 |
tim |
277 |
assert(bs1.size() == bs2.size()); |
130 |
|
|
|
131 |
|
|
BitSet result(bs1); |
132 |
|
|
result |= bs2; |
133 |
|
|
return result; |
134 |
|
|
} |
135 |
|
|
|
136 |
tim |
278 |
BitSet operator& (const BitSet& bs1, const BitSet& bs2) { |
137 |
tim |
277 |
assert(bs1.size() == bs2.size()); |
138 |
|
|
|
139 |
|
|
BitSet result(bs1); |
140 |
|
|
result &= bs2; |
141 |
|
|
return result; |
142 |
|
|
} |
143 |
|
|
|
144 |
tim |
278 |
BitSet operator^ (const BitSet& bs1, const BitSet& bs2) { |
145 |
tim |
277 |
assert(bs1.size() == bs2.size()); |
146 |
|
|
|
147 |
|
|
BitSet result(bs1); |
148 |
|
|
result ^= bs2; |
149 |
|
|
return result; |
150 |
|
|
} |
151 |
|
|
|
152 |
|
|
bool operator== (const BitSet & bs1, const BitSet &bs2) { |
153 |
|
|
assert(bs1.size() == bs2.size()); |
154 |
|
|
return std::equal(bs1.bitset_.begin(), bs1.bitset_.end(), bs2.bitset_.begin()); |
155 |
|
|
} |
156 |
|
|
|
157 |
tim |
278 |
std::istream& operator>> ( std::istream& is, const BitSet& bs) { |
158 |
tim |
277 |
|
159 |
tim |
278 |
return is; |
160 |
tim |
277 |
} |
161 |
|
|
|
162 |
|
|
std::ostream& operator<< ( std::ostream& os, const BitSet& bs) { |
163 |
tim |
278 |
return os; |
164 |
tim |
277 |
} |
165 |
|
|
|
166 |
|
|
} |