51 |
|
|
52 |
|
|
53 |
|
SelectionEvaluator::SelectionEvaluator(SimInfo* si) |
54 |
< |
: info(si), nameFinder(info), distanceFinder(info), indexFinder(info), |
54 |
> |
: info(si), nameFinder(info), distanceFinder(info), hullFinder(info), |
55 |
> |
indexFinder(info), |
56 |
|
isLoaded_(false){ |
57 |
|
nStuntDouble = info->getNGlobalAtoms() + info->getNGlobalRigidBodies(); |
58 |
|
} |
181 |
|
break; |
182 |
|
case Token::within: |
183 |
|
withinInstruction(instruction, stack.top()); |
184 |
+ |
break; |
185 |
+ |
case Token::hull: |
186 |
+ |
stack.push(hull()); |
187 |
|
break; |
188 |
|
//case Token::selected: |
189 |
|
// stack.push(getSelectionSet()); |
440 |
|
bs = indexFinder.find(indexRange.first, indexRange.second); |
441 |
|
} |
442 |
|
} |
443 |
+ |
|
444 |
+ |
return bs; |
445 |
+ |
} |
446 |
|
|
447 |
+ |
|
448 |
+ |
OpenMDBitSet SelectionEvaluator::hull() { |
449 |
+ |
OpenMDBitSet bs(nStuntDouble); |
450 |
+ |
|
451 |
+ |
bs = hullFinder.findHull(); |
452 |
+ |
|
453 |
|
return bs; |
454 |
|
} |
455 |
|
|
456 |
|
|
457 |
+ |
|
458 |
|
RealType SelectionEvaluator::getCharge(Atom* atom) { |
459 |
|
RealType charge =0.0; |
460 |
|
AtomType* atomType = atom->getAtomType(); |